csanford's library 209 articles Export

	Properties and metabolism of the aqueous cytoplasm and its boundaries. [My Copy] The American journal of physiology, Vol. 246, No. 2 Pt 2. (February 1984) by J. S. Clegg posted to cytosol metabolism by csanford on 2009-01-29 22:30:47 as
	Multidimensional annotation of the Escherichia coli K-12 genome [My Copy] Nucl. Acids Res., Vol. 35, No. 22. (3 December 2007), pp. 7577-7590. by Peter D. Karp, Ingrid M. Keseler, Alexander Shearer, et al.Mario Latendresse, Markus Krummenacker, Suzanne M. Paley, Ian Paulsen, Julio Collado-Vides, Socorro Gama-Castro, Martin Peralta-Gil, Alberto Santos-Zavaleta, Monica I. Penaloza-Spinola, Cesar Bonavides-Martinez, John Ingraham posted to ecocyc by csanford on 2009-01-29 22:13:59 as along with 1 person tmmurali
	Physiological concentrations of 2-oxoglutarate regulate the activity of phosphoenolpyruvate carboxykinase in liver. [My Copy] The Biochemical journal, Vol. 285 ( Pt 3) (1 August 1992), pp. 767-771. by M. A. Titheradge, R. A. Picking, R. C. Haynes posted to glycolysis inhibition oxoglutarate by csanford on 2009-01-24 21:24:44 as
	Compartmentation protects trypanosomes from the dangerous design of glycolysis. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 97, No. 5. (29 February 2000), pp. 2087-2092. by B. M. Bakker, F. I. Mensonides, B. Teusink, P. van Hoek, P. A. Michels, H. V. Westerhoff posted to glycosome simulation by csanford on 2009-01-21 22:17:56 as
	Neurobiology of ammonia. [My Copy] Progress in neurobiology, Vol. 67, No. 4. (July 2002), pp. 259-279. by V. Felipo, R. F. Butterworth posted to ammonia by csanford on 2009-01-19 20:32:47 as
	Studying protein dynamics in living cells. [My Copy] Nat Rev Mol Cell Biol, Vol. 2, No. 6. (June 2001), pp. 444-456. by J. Lippincott-Schwartz, E. Snapp, A. Kenworthy posted to diffusion fcs frap review by csanford on 2009-01-17 23:15:53 as along with 1 person lmcf
	Dynamic cellular automata: an alternative approach to cellular simulation [My Copy] In Silico Biology, Vol. 4 (2004), 14. by David S. Wishart, Robert Yang, David Arndt, Peter Tang, Joseph Cruz posted to simcell by csanford on 2009-01-16 07:10:45 as
	The virtual cell. [My Copy] Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing (1999), pp. 228-239. by J. Schaff, L. M. Loew posted to vcell by csanford on 2009-01-16 06:51:24 as
	BioSPICE: a computational infrastructure for integrative biology. [My Copy] Omics : a journal of integrative biology, Vol. 7, No. 3. (2003) by S. P. Kumar, J. C. Feidler posted to biospice by csanford on 2009-01-16 06:35:09 as
	Regulation of cell size in the yeast Saccharomyces cerevisiae. [My Copy] Journal of bacteriology, Vol. 137, No. 1. (January 1979), pp. 1-5. by G. C. Johnston, C. W. Ehrhardt, A. Lorincz, B. L. Carter posted to size yeast by csanford on 2009-01-14 20:50:48 as
	Inborn errors of metabolism [My Copy] (1923) by A. E. Garrod edited by Henry Frowde posted to metabolism by csanford on 2009-01-14 19:12:10 as
	The CyberCell Database (CCDB): a comprehensive, self-updating, relational database to coordinate and facilitate in silico modeling of Escherichia coli. [My Copy] Nucleic acids research, Vol. 32, No. Database issue. (1 January 2004) by S. Sundararaj, A. Guo, B. Habibi-Nazhad, et al.M. Rouani, P. Stothard, M. Ellison, D. S. Wishart posted to cybercell by csanford on 2009-01-14 19:04:03 as along with 1 person ocs
	An expanded genome-scale model of Escherichia coli K-12 (iJR904 GSM/GPR) [My Copy] Genome Biology, Vol. 4, No. 9. (2003), R54. by Jennifer Reed, Thuy Vo, Christophe Schilling, Bernhard Palsson posted to ecoli by csanford on 2009-01-14 19:00:48 as along with 5 people and 2 groups schwartzjmc michaelbarton cate bjorns JeremyZucker biospec MetabolicModeling
	The potential of metabolomics tools in bioremediation studies. [My Copy] Omics : a journal of integrative biology, Vol. 11, No. 3. (2007), pp. 305-313. by S. G. Villas-Bôas, P. Bruheim posted to bioremediation engineering metabolic by csanford on 2009-01-13 19:44:53 as along with 1 person icases
	Metabolic engineering for advanced biofuels production from Escherichia coli. [My Copy] Current opinion in biotechnology, Vol. 19, No. 5. (12 October 2008), pp. 414-419. by Shota Atsumi, James C. Liao posted to biofuels engineering metabolic by csanford on 2009-01-13 19:43:18 as along with 2 people Vincent_Rouilly niubi100
	Multiscale Hy3S: Hybrid stochastic simulation for supercomputers [My Copy] BMC Bioinformatics, Vol. 7, No. 1. (2006) by Howard Salis, Vassilios Sotiropoulos, Yiannis Kaznessis posted to hy3s simulation by csanford on 2009-01-13 06:29:45 as along with 1 person salis
	the JigCell model builder and run manager. [My Copy] Bioinformatics (Oxford, England), Vol. 20, No. 18. (12 December 2004), pp. 3680-3681. by M. Vass, N. Allen, C. A. Shaffer, N. Ramakrishnan, L. T. Watson, J. J. Tyson posted to jigcell simulation by csanford on 2009-01-13 06:21:30 as
	STOCHSIM: modelling of stochastic biomolecular processes [My Copy] Bioinformatics, Vol. 17, No. 6. (1 June 2001), pp. 575-576. by Nicolas Le Novere, Thomas S. Shimizu posted to simulation stochsim by csanford on 2009-01-13 06:16:20 as along with 5 people and 2 groups chrn carmaus mattis23 dagmar lenov dIEMoSIRIS MoSi-Rostock
	Automatic generation of cellular reaction networks with Moleculizer 1.0 [My Copy] Nature Biotechnology, Vol. 23, No. 1. (06 January 2005), pp. 131-136. by Larry Lok, Roger Brent posted to moleculizer simulation by csanford on 2009-01-13 06:11:34 as along with 3 people rklancer wnpx oelemento
	STOCKS: STOChastic Kinetic Simulations of biochemical systems with Gillespie algorithm [My Copy] Bioinformatics, Vol. 18, No. 3. (1 March 2002), pp. 470-481. by Andrzej M. Kierzek posted to simulation stocks by csanford on 2009-01-13 06:08:00 as along with 1 person cannin
	BioNetGen: software for rule-based modeling of signal transduction based on the interactions of molecular domains. [My Copy] Bioinformatics (Oxford, England), Vol. 20, No. 17. (22 November 2004), pp. 3289-3291. by M. L. Blinov, J. R. Faeder, B. Goldstein, W. S. Hlavacek posted to bionetgen simulation by csanford on 2009-01-13 06:04:38 as along with 3 people and 2 groups jjray pauldobson mattis23 dIEMoSIRIS MoSi-Rostock
	Cellerator: extending a computer algebra system to include biochemical arrows for signal transduction simulations. [My Copy] Bioinformatics, Vol. 19, No. 5. (22 March 2003), pp. 677-678. by B. E. Shapiro, A. Levchenko, E. M. Meyerowitz, B. J. Wold, E. D. Mjolsness posted to cellerator simulation by csanford on 2009-01-13 05:59:37 as along with 3 people and 2 groups mjoach smithco sstoma Plant-Tissue-Simulation VirtualPlants
	Construction of a biological tissue model based on a single-cell model: a computer simulation of metabolic heterogeneity in the liver lobule. [My Copy] Artificial life, Vol. 14, No. 1. (2008), pp. 3-28. by H. Ohno, Y. Naito, H. Nakajima, M. Tomita posted to e-cell simulation by csanford on 2009-01-13 05:49:26 as along with 1 person ynaito
	Automatic and quantitative measurement of protein-protein colocalization in live cells. [My Copy] Biophysical journal, Vol. 86, No. 6. (June 2004), pp. 3993-4003. by S. V. Costes, D. Daelemans, E. H. Cho, Z. Dobbin, G. Pavlakis, S. Lockett posted to colocalization by csanford on 2009-01-13 05:00:02 as
	Mechanism and size cutoff for steric exclusion from actin-rich cytoplasmic domains. [My Copy] Biophysical journal, Vol. 71, No. 3. (September 1996), pp. 1228-1234. by L. W. Janson, K. Ragsdale, K. Luby-Phelps posted to compartmentation cytoplasm domains peripheral by csanford on 2009-01-12 01:55:58 as
	Subcellular compartmentalization by local differentiation of cytoplasmic structure. [My Copy] Cell motility and the cytoskeleton, Vol. 10, No. 1-2. (1988), pp. 28-37. by K. Luby-Phelps, D. L. Taylor posted to compartmentation cytoplasmic domains peripheral by csanford on 2009-01-12 01:53:08 as
	Interactions between serine acetyltransferase and O-acetylserine (thiol) lyase in higher plants--structural and kinetic properties of the free and bound enzymes. [My Copy] European journal of biochemistry / FEBS, Vol. 255, No. 1. (1 July 1998), pp. 235-245. by M. Droux, M. L. Ruffet, R. Douce, D. Job posted to acetyltransferase channelingexample plants serine by csanford on 2009-01-11 20:31:41 as
	Citric acid cycle redux [My Copy] Trends in Biochemical Sciences, Vol. 15, No. 11. (November 1990), pp. 411-412. by P. Srere posted to acid channelingexample citric cycle by csanford on 2009-01-11 19:15:32 as
	An electrostatic highway. [My Copy] Nature structural biology, Vol. 1, No. 3. (March 1994), pp. 131-134. by R. M. Stroud posted to channeling channelingexample electrostatic by csanford on 2009-01-09 05:51:06 as
	Structure of and kinetic channelling in bifunctional dihydrofolate reductase-thymidylate synthase. [My Copy] Nature structural biology, Vol. 1, No. 3. (March 1994), pp. 186-194. by D. R. Knighton, C. C. Kan, E. Howland, et al.C. A. Janson, Z. Hostomska, K. M. Welsh, D. A. Matthews posted to channeling channelingexample electrostatic by csanford on 2009-01-09 05:50:22 as along with 1 person vktrfrnkl
	Swinging arms and swinging domains in multifunctional enzymes: catalytic machines for multistep reactions. [My Copy] Annual review of biochemistry, Vol. 69 (2000), pp. 961-1004. by R. N. Perham posted to channeling mechanisms swingingarms by csanford on 2009-01-09 05:05:08 as
	Channeling of substrates and intermediates in enzyme-catalyzed reactions. [My Copy] Annual review of biochemistry, Vol. 70 (2001), pp. 149-180. by X. Huang, H. M. Holden, F. M. Raushel posted to channeling metabolic review by csanford on 2009-01-09 04:44:03 as
	The origin of a useful concept--feedback inhibition. [My Copy] Protein science : a publication of the Protein Society, Vol. 1, No. 10. (October 1992), pp. 1392-1395. by H. E. Umbarger posted to feedback inhibition by csanford on 2009-01-09 00:38:39 as
	ISOLATION OF THE LAC REPRESSOR. [My Copy] Proc Natl Acad Sci U S A, Vol. 56, No. 6. (December 1966), pp. 1891-1898. by Walter Gilbert, Benno Müller-Hill posted to ecoli feedback regulation by csanford on 2009-01-09 00:16:24 as along with 1 person madhadron
	Potential for metabolic engineering of resveratrol biosynthesis. [My Copy] Trends in biotechnology, Vol. 26, No. 2. (February 2008), pp. 77-81. by C. Halls, O. Yu posted to engineering metabolic resveratrol by csanford on 2009-01-08 22:23:16 as
	Improving the nutritional value of Golden Rice through increased pro-vitamin A content [My Copy] Nature Biotechnology, Vol. 23, No. 4. (27 March 2005), pp. 482-487. by Jacqueline A. Paine, Catherine A. Shipton, Sunandha Chaggar, et al.Rhian M. Howells, Mike J. Kennedy, Gareth Vernon, Susan Y. Wright, Edward Hinchliffe, Jessica L. Adams, Aron L. Silverstone, Rachel Drake posted to engineering goldenrice metabolic by csanford on 2009-01-08 22:18:43 as along with 2 people welschra Blackbeard
	Overview of the role of alcohol dehydrogenase and aldehyde dehydrogenase and their variants in the genesis of alcohol-related pathology. [My Copy] The Proceedings of the Nutrition Society, Vol. 63, No. 1. (February 2004), pp. 49-63. by D. W. Crabb, M. Matsumoto, D. Chang, M. You posted to alcoholflushsyndrome by csanford on 2009-01-08 22:15:40 as
	Progress toward cell-directed therapy for phenylketonuria [My Copy] Clinical Genetics, Vol. 74, No. 2. (August 2008), pp. 97-104. by Harding, posted to phenylketonuria by csanford on 2009-01-08 22:13:28 as along with 1 person min013
	The in-vitro synthesized tomato shikimate kinase precursor is enzymatically active and is imported and processed to the mature enzyme by chloroplasts. [My Copy] The Plant journal : for cell and molecular biology, Vol. 2, No. 3. (May 1992), pp. 375-383. by J. Schmid, A. Schaller, U. Leibinger, W. Boll, N. Amrhein posted to channeling chloroplast kinase shikimate by csanford on 2009-01-08 20:00:56 as
	Microcompartmentation, metabolic channelling and carbohydrate metabolism. [My Copy] The international journal of biochemistry & cell biology, Vol. 27, No. 2. (February 1995), pp. 123-132. by M. al-Habori posted to channeling glycolysis metabolic by csanford on 2009-01-07 22:56:49 as
	Computer Methods for Ordinary Differential Equations and Differential-Algebraic Equations [My Copy] (31 July 1998) by L. R. Petzold posted to euler method by csanford on 2009-01-07 22:19:47 as along with 1 person ortegaroberto
	Protein interaction mapping: A Drosophila case study [My Copy] Genome Res., Vol. 15, No. 3. (1 March 2005), pp. 376-384. by Etienne Formstecher, Sandra Aresta, Vincent Collura, et al.Alexandre Hamburger, Alain Meil, Alexandra Trehin, Celine Reverdy, Virginie Betin, Sophie Maire, Christine Brun, Bernard Jacq, Monique Arpin, Yohanns Bellaiche, Saverio Bellusci, Philippe Benaroch, Michel Bornens, Roland Chanet, Philippe Chavrier, Olivier Delattre, Valerie Doye, Richard Fehon, Gerard Faye, Thierry Galli, Jean-Antoine Girault, Bruno Goud, Jean de Gunzburg, Ludger Johannes, Marie-Pierre Junier, Vincent Mirouse, Ashim Mukherjee, Dora Papadopoulo, Franck Perez, Anne Plessis, Carine Rosse, Simon Saule, Dominique Stoppa-Lyonnet, Alain Vincent, Michael White, Pierre Legrain, Jerome Wojcik, Jacques Camonis, Laurent Daviet posted to drosophila ppi two-hybrid yeast by csanford on 2009-01-07 21:21:22 as along with 5 people semin balajis sesejun eukfn gcalda
	Effect of sampling on topology predictions of protein-protein interaction networks. [My Copy] Nature biotechnology, Vol. 23, No. 7. (07 July 2005), pp. 839-844. by Jing-Dong D. Han, Denis Dupuy, Nicolas Bertin, Michael E. Cusick, Marc Vidal posted to affinity capture mass spectrometry two-hybrid yeast by csanford on 2009-01-07 21:15:00 as along with 15 people wiedenhoeft diamantis cerca snuppepuppan kuhn rabbat gurkanbebek koller eukfn mikaelhuss grahamc cjeans iris_2001 paolomarcatili carlk
	Analyzing yeast protein-protein interaction data obtained from different sources [My Copy] Nat Biotech, Vol. 20, No. 10. (October 2002), pp. 991-997. by Gary D. Bader, Christopher W. Hogue posted to affinity capture mass spectrometry two-hybrid yeast by csanford on 2009-01-07 21:12:16 as along with 8 people and 1 group lawraga dragonrez lfriedl balajis wnpx dgront iris_2001 karfunkel kdl
	Glucosinolate metabolism and its control. [My Copy] Trends in plant science, Vol. 11, No. 2. (February 2006), pp. 89-100. by C. D. Grubb, S. Abel posted to control feedback inhibition metabolic by csanford on 2009-01-07 20:46:35 as
	Metabolic control analysis and regulation of the conversion of sucrose to starch in growing potato tubers [My Copy] Plant, Cell & Environment, Vol. 27, No. 6. (2004), pp. 655-673. by P. Geigenberger, M. Stitt, A. R. Fernie posted to control feedback inhibition metabolic by csanford on 2009-01-07 20:45:37 as
	Concurrent interactions of heme and FLU with Glu tRNA reductase (HEMA1), the target of metabolic feedback inhibition of tetrapyrrole biosynthesis, in dark- and light-grown Arabidopsis plants. [My Copy] The Plant journal : for cell and molecular biology, Vol. 40, No. 6. (December 2004), pp. 957-967. by D. Goslings, R. Meskauskiene, C. Kim, K. P. Lee, M. Nater, K. Apel posted to control feedback inhibition metabolic by csanford on 2009-01-07 20:40:01 as
	BioGRID: a general repository for interaction datasets. [My Copy] Nucleic Acids Res, Vol. 34, No. Database issue. (1 January 2006) by C. Stark, B. J. Breitkreutz, T. Reguly, L. Boucher, A. Breitkreutz, M. Tyers posted to biogrid by csanford on 2008-12-17 02:25:48 as along with 15 people tienholin TheresaNiederberger allysonlister cerca guhjy balajis koller nm lpfernandes Evangelia chasmand carlk dragonrez tmmurali dylanwalker
	Macromolecular crowding in vitro as means of emulating cellular interiors: When less might be more. [My Copy] Proceedings of the National Academy of Sciences of the United States of America (5 December 2008) by K S S. Harve, R Vigneshwar, R Rajagopalan, M Raghunath posted to crowding by csanford on 2008-12-16 04:56:41 as
	Interaction network containing conserved and essential protein complexes in Escherichia coli [My Copy] Nature, Vol. 433, No. 7025. (03 February 2005), pp. 531-537. by Gareth Butland, Jose M. Peregrin-Alvarez, Joyce Li, et al.Wehong Yang, Xiaochun Yang, Veronica Canadien, Andrei Starostine, Dawn Richards, Bryan Beattie, Nevan Krogan, Michael Davey, John Parkinson, Jack Greenblatt, Andrew Emili posted to ecoli emili interactions network ppi by csanford on 2008-12-12 00:55:48 as along with 9 people robfsouza mirkocortese snuppepuppan karbak bjorns balajis BarrosH gcalda discreteonyxorb

Note: You may cite this page as: http://www.citeulike.org/user/csanford

Result page: 1 2 3 4 5 Next

channeling	68
metabolic	64
simulation	42
modelling	19
controversy	16
ppi	16
yeast	16
network	15
synthase	15
channelingexample	12
glycolysis	11
review	10
compartmentation	9
diffusion	9
tryptophan	8
two-hybrid	8
crowding	7
ecoli	7
enzyme	7
ammonia	6
diffusioncoefficient	5
energy	5
engineering	5
feedback	5
free	5
inhibition	5
interactions	5
carbamoyl	4
chorismate	4
control	4
dehydrogenase	4
e-cell	4
metabolon	4
phosphate	4
anthranilate	3
cell	3
cytoplasm	3
database	3
example	3
extraction	3
fusion	3
gene	3
kinase	3
malate	3
metabolite	3
smoldyn	3
affinity	2
analysis	2
capture	2
citrate	2
colocalization	2
coupling	2
domains	2
drosophila	2
electrostatic	2
enolase	2
fly	2
glycosome	2
human	2
intracellular	2
kinetics	2
localization	2
lyase	2
macromolecular	2
mass	2
mechanisms	2
metabolism	2
methylenetetrahydrofolate	2
microfilament	2
mutase	2
peripheral	2
regulation	2
spectrometry	2
tensegrity	2
tetrahydrofolate	2
13c	1
abyssi	1
acetyltransferase	1
acid	1
actin	1
alcoholflushsyndrome	1
arginase	1
argininosuccinate	1
bacteria	1
biochemistry	1
biofuels	1
biogrid	1
bionetgen	1
bioremediation	1
biospice	1
brenda	1
cancersim	1
cascade	1
cellerator	1
cellml	1
cellsim	1
cellware	1
channling	1
chemidplus	1
chloroplast	1
cho	1
citric	1
collins	1
concentration	1
contribution	1
creatine	1
cybercell	1
cycle	1
cyclohydrolase	1
cytoplasmic	1
cytoskeleton	1
cytosol	1
designer	1
dihydrofolate	1
dlsode	1
dna	1
dynetica	1
ecocyc	1
emili	1
encapsulin	1
erythrocyte	1
euler	1
falciparum	1
fcs	1
flight	1
flux	1
folate	1
frap	1
frequentfliers	1
gavin	1
gepasi	1
gfrd	1
glucosamine-6-phosphate	1
goldenrice	1
group	1
helicobacter	1
hy3s	1
isocitrate	1
isoprenoid	1
isozyme	1
jigcell	1
kegg	1
krogan	1
language	1
lsode	1
mavrovouniotis	1
mcell	1
menton	1
mesord	1
methenyltetrahydrofolate	1
method	1
michaelis	1
microenvironment	1
moleculizer	1
ms	1
multifunctional	1
net	1
nist	1
ode	1
one-carbon	1
orotate	1
oxoglutarate	1
particle	1
petri	1
phenylketonuria	1
phosphoribosyltransferase	1
phosphorylation	1
plant	1
plants	1
plasmodium	1
prediction	1
prolinks	1
pylori	1
pyrococcus	1
resveratrol	1
rosetta	1
sbml	1
serine	1
shikimate	1
signaling	1
simcell	1
size	1
smartcell	1
stochsim	1
stocks	1
stone	1
swingingarms	1
swissprot	1
tanaka	1
thermodynamics	1
toxicity	1
trans-cinnamate	1
urea	1
vcell	1
virtualcell	1
wholecell	1

csanford's library 209 articles Export

csanford's tags