cwbrown's library 40 articles Export

	In vivo dynamics of RNA polymerase II transcription [My Copy] Nat Struct Mol Biol, Vol. 14, No. 9. (5 September 2007), pp. 796-806. by Xavier Darzacq, Yaron Shav-Tal, Valeria de Turris, et al.Yehuda Brody, Shailesh M. Shenoy, Robert D. Phair, Robert H. Singer posted to core_transcription_machinery modeling single_molecule by cwbrown on 2007-11-14 00:13:28 as along with 5 people and 3 groups jjray dpollard dchughes madhadron margaritis EisenLab G4ID Genetics-of-Gambling
	Neural Tissue in Ascidian Embryos Is Induced by FGF9/16/20, Acting via a Combination of Maternal GATA and Ets Transcription Factors [My Copy] Cell, Vol. 115, No. 5. (26 November 2003), pp. 615-627. by Vincent Bertrand, Clare Hudson, Danielle Caillol, Cornel Popovici, Patrick Lemaire posted to ciona enhancer_function by cwbrown on 2007-11-08 00:45:10 as along with 1 group EisenLab
	Genomic cis-regulatory logic: experimental and computational analysis of a sea urchin gene. [My Copy] Science, Vol. 279, No. 5358. (20 March 1998), pp. 1896-1902. by C. H. Yuh, H. Bolouri, E. H. Davidson posted to enhancer_function sea_urchin by cwbrown on 2007-11-08 00:41:35 as along with 1 group EisenLab
	Deletion of Ultraconserved Elements Yields Viable Mice [My Copy] PLoS Biol, Vol. 5, No. 9. (4 September 2007), e234. by Nadav Ahituv, Yiwen Zhu, Axel Visel, et al.Amy Holt, Veena Afzal, Len A. Pennacchio, Edward M. Rubin posted to enhancer_function mammals ultraconserved_elements by cwbrown on 2007-11-08 00:37:58 as along with 10 people and 3 groups galka8_diploma aprasad balicea dchughes djkt lp2 cabbagezs Stew gjuggler bpcusack EisenLab G4ID Genetics-of-Gambling
	Tissue-specific transcriptional regulation has diverged significantly between human and mouse. [My Copy] Nature genetics, Vol. 39, No. 6. (21 June 2007), pp. 730-732. by Duncan T. Odom, Robin D. Dowell, Elizabeth S. Jacobsen, et al.William Gordon, Timothy W. Danford, Kenzie D. MacIsaac, P. Alexander Rolfe, Caitlin M. Conboy, David K. Gifford, Ernest Fraenkel posted to chip-chip mammals by cwbrown on 2007-11-08 00:36:45 as along with 13 people and 4 groups vingron ajaymalik fenghezi dpollard gpalidwor dchughes djkt cjeans maximilianh fpattyn caseybrown yevishere gdb EisenLab G4ID Genetics-of-Gambling cis-regulatory-evolution
	Which evolutionary processes influence natural genetic variation for phenotypic traits? [My Copy] Nat Rev Genet, Vol. 8, No. 11. (November 2007), pp. 845-856. by Thomas Mitchell-Olds, John H. Willis, David B. Goldstein posted to molecular_evolution phenotypic_evolution population_genetics review by cwbrown on 2007-11-08 00:35:36 as along with 3 people and 2 groups Zephyrus zwang ryanraaum R.E.A.D EisenLab
	Genomic profiling and expression studies reveal both positive and negative activities for the Drosophila Myb MuvB/dREAM complex in proliferating cells [My Copy] Genes Dev. (31 October 2007), gad.1600107. by Daphne Georlette, Soyeon Ahn, David M. Macalpine, et al.Evelyn Cheung, Peter W. Lewis, Eileen L. Beall, Stephen P. Bell, Terry Speed, Robert J. Manak, Michael R. Botchan posted to dna_replication transcriptional_regulatory_complex by cwbrown on 2007-11-07 21:23:13 as along with 1 group EisenLab
	A Bacterial Effector Acts as a Plant Transcription Factor and Induces a Cell Size Regulator [My Copy] Science, Vol. 318, No. 5850. (26 October 2007), pp. 648-651. by Sabine Kay, Simone Hahn, Eric Marois, Gerd Hause, Ulla Bonas posted to plant-pathogen_interaction transcription_factor type_iii_secretion by cwbrown on 2007-11-07 00:59:03 as along with 1 person and 1 group saru EisenLab
	Transcription of histone gene cluster by differential core-promoter factors [My Copy] Genes Dev. (31 October 2007), gad.1608807. by Yoh Isogai, Sunduz Keles, Matthias Prestel, Andreas Hochheimer, Robert Tjian posted to core_transcription_machinery transcriptional_regulatory_complex by cwbrown on 2007-11-07 00:37:47 as along with 2 people and 1 group sebastien_vigneau epigenetics EisenLab
	Protein-Protein Interactions Dominate the Assembly Thermodynamics of a Transcription Repression Complex [My Copy] Biochemistry (1 November 2007) by H. Zhao, E. Streaker, W. Pan, D. Beckett posted to dna_binding e_coli thermodynamics transcriptional_regulatory_complex by cwbrown on 2007-11-07 00:36:20 as along with 1 group EisenLab
	A Gene Regulatory Network Subcircuit Drives a Dynamic Pattern of Gene Expression [My Copy] Science, Vol. 318, No. 5851. (2 November 2007), pp. 794-797. by Joel Smith, Christina Theodoris, Eric H. Davidson posted to enhancer_function sea_urchin by cwbrown on 2007-11-07 00:31:42 as along with 8 people and 2 groups leemond31 jjray joseph_x_zhou lshaw shigepong zwang heliopais hpaces bioNetwork_sysBio EisenLab
	Population Genomics: Whole-Genome Analysis of Polymorphism and Divergence in Drosophila simulans [My Copy] PLoS Biol, Vol. 5, No. 11. (6 November 2007), e310. by David J. Begun, Alisha K. Holloway, Kristian Stevens, et al.Ladeana W. Hillier, Yu-Ping Poh, Matthew W. Hahn, Phillip M. Nista, Corbin D. Jones, Andrew D. Kern, Colin N. Dewey, Lior Pachter, Eugene Myers, Charles H. Langley posted to population_genetics whole_genome by cwbrown on 2007-11-07 00:29:37 as along with 8 people and 4 groups jlin daveGerrard APRegier juanitogarcia xingxu caseybrown Neeperando druvus BergmanLab Computational-Genomics EisenLab Notre Dame Bioinformatics
	A sex-ratio Meiotic Drive System in Drosophila simulans. II: An X-linked Distorter [My Copy] PLoS Biology, Vol. 5, No. 11. (1 November 2007), e293. by Yun Tao, Luciana Araripe, Sarah B. Kingan, Yeyan Ke, Hailian Xiao, Daniel L. Hartl posted to meiotic_drive sex_ratio_evolution by cwbrown on 2007-11-07 00:26:43 as along with 1 group EisenLab
	A sex-ratio Meiotic Drive System in Drosophila simulans. I: An Autosomal Suppressor [My Copy] PLoS Biology, Vol. 5, No. 11. (1 November 2007), e292. by Yun Tao, John P. Masly, Luciana Araripe, Yeyan Ke, Daniel L. Hartl posted to meiotic_drive sex_ratio_evolution by cwbrown on 2007-11-07 00:26:01 as along with 1 group EisenLab
	Chromatin remodeling: insights and intrigue from single-molecule studies [My Copy] Nature Structural & Molecular Biology, Vol. 14, No. 11. (05 November 2007), pp. 989-996. by Bradley R. Cairns posted to chromatin chromatin_remodeling review single_molecule by cwbrown on 2007-11-07 00:21:03 as along with 3 people and 2 groups Petersarkies zhlei skoch3 EisenLab Koch_Lab
	Gene regulation through nuclear organization [My Copy] Nature Structural & Molecular Biology, Vol. 14, No. 11. (05 November 2007), pp. 1049-1055. by Tom Sexton, Heiko Schober, Peter Fraser, Susan M. Gasser posted to chromatin review subnuclear_localization by cwbrown on 2007-11-07 00:19:33 as along with 2 people and 1 group harry_fht sebastien_vigneau EisenLab
	Functional Specificity of a Hox Protein Mediated by the Recognition of Minor Groove Structure [My Copy] Cell, Vol. 131, No. 3. (02 November 2007), pp. 530-543. by Rohit Joshi, Jonathan M. Passner, Remo Rohs, et al.Rinku Jain, Alona Sosinsky, Michael A. Crickmore, Vinitha Jacob, Aneel K. Aggarwal, Barry Honig, Richard S. Mann posted to dna_binding homeobox structure by cwbrown on 2007-11-07 00:16:47 as along with 4 people and 1 group vingron emptyhb blobbybirdman oelemento EisenLab
	A Universal Framework for Regulatory Element Discovery across All Genomes and Data Types [My Copy] Molecular Cell, Vol. 28, No. 2. (26 October 2007), pp. 337-350. by Olivier Elemento, Noam Slonim, Saeed Tavazoie posted to enhancer_prediction motif_finding by cwbrown on 2007-11-06 23:11:19 as along with 17 people and 2 groups cerca ilyashl TRHvidsten leelarcombe kieran101 ana brant aswin cjeans zwang cabbagezs nklee maximilianh idonaldson sb_journal_club kristen barwil EisenLab Motif Discovery
	Phenotypic and transcriptional response to selection for alcohol sensitivity in Drosophila melanogaster [My Copy] Genome Biology, Vol. 8 (31 October 2007), R231. by Tatiana V. Morozova, Robert R. H. Anholt, Trudy F. C. Mackay posted to alcohol directed_evolution gene_expression_evolution by cwbrown on 2007-11-06 23:08:56 as along with 1 group EisenLab
	Detecting Coevolution in and among Protein Domains [My Copy] PLoS Comput Biol, Vol. 3, No. 11. (2 November 2007), e211. by Chen-Hsiang Yeang, David Haussler posted to algorithm coevolution pfam protein_domains by cwbrown on 2007-11-06 21:29:42 as along with 2 people and 1 group qluo druvus EisenLab
	Competitive speed eating: truth and consequences. [My Copy] AJR. American journal of roentgenology, Vol. 189, No. 3. (September 2007), pp. 681-686. by M. S. Levine, G. Spencer, A. Alavi, D. C. Metz posted to gastroenterology speed_eating by cwbrown on 2007-08-30 17:49:31 as along with 1 person and 1 group AJCann EisenLab
	Transcription factor concentrations versus binding site affinities in the yeast S. cerevisiae. [My Copy] Phys Biol, Vol. 4, No. 2. (June 2007), pp. 134-143. by E. Aurell, A. F. d'Hérouël, C. Malmnäs, M. Vergassola posted to dna_binding_affinity transcription_factor yeast by cwbrown on 2007-08-10 18:23:12 as along with 1 person and 1 group nklee EisenLab
	Lehninger Principles of Biochemistry, Fourth Edition [My Copy] (23 April 2004) by David L. Nelson, Michael M. Cox posted to lab_library by cwbrown on 2007-05-16 23:23:25 as along with 3 people and 1 group Borelli reyez dherkova EisenLab
	Molecular Biology of the Cell, Fourth Edition [My Copy] by Bruce Alberts, Alexander Johnson, Julian Lewis, Martin Raff, Keith Roberts, Peter Walter posted to lab_library by cwbrown on 2007-05-16 23:21:17 as along with 6 people and 3 groups aprasad reyez rhem1224 zlu larios dherkova EisenLab TCR_Signaling SysbioMPI-TCells
	Proteins: Structures and Molecular Properties [My Copy] (15 August 1992) by Thomas E. Creighton posted to lab_library by cwbrown on 2007-05-16 23:20:21 as along with 1 person and 1 group edvin EisenLab
	Developmental Biology, Eighth Edition (Developmental Biology) [My Copy] (24 March 2006) by Scott F. Gilbert posted to lab_library by cwbrown on 2007-05-16 23:17:39 as along with 1 group EisenLab
	MotifCombinator: a web-based tool to search for combinations of cis-regulatory motifs [My Copy] BMC Bioinformatics, Vol. 8 (22 March 2007), 100. by Mamoru Kato, Tatsuhiko Tsunoda posted to combinatorial_regulation motif_finding software by cwbrown on 2007-03-29 22:22:57 as along with 3 people and 1 group nklee idonaldson isimpson EisenLab
	Quantifying DNA-protein binding specificities by using oligonucleotide mass tags and mass spectroscopy [My Copy] PNAS, Vol. 104, No. 9. (27 February 2007), pp. 3061-3066. by Lingang Zhang, Simon Kasif, And C. Cantor posted to dna_binding mass_spec method transcription_factor by cwbrown on 2007-03-29 22:07:00 as along with 2 people and 1 group guhjy zwang EisenLab
	Translational and rotational settings of H2A.Z nucleosomes across the Saccharomycescerevisiae genome [My Copy] Nature, Vol. 446, No. 7135., pp. 572-576. by Istvan Albert, Travis N. Mavrich, Lynn P. Tomsho, et al.Ji Qi, Sara J. Zanton, Stephan C. Schuster, Franklin B. Pugh posted to chromatin histone_variants nucleosome_mapping by cwbrown on 2007-03-29 21:13:37 as along with 4 people and 1 group hagechouchin443 talponer lusk vega EisenLab
	Predicting tissue-specific enhancers in the human genome [My Copy] Genome Research, Vol. 17, No. 2. (8 February 2007), pp. 201-211. by Len A. Pennacchio, Gabriela G. Loots, Marcelo A. Nobrega, Ivan Ovcharenko posted to enhancer_prediction human by cwbrown on 2007-03-29 21:11:34 as along with 7 people and 1 group tonamswish cisstem indigoviolet maximilianh heliopais roys barwil EisenLab
	Quantifying similarity between motifs [My Copy] Genome Biology, Vol. 8, No. 2. (26 February 2007), R24. by Shobhit Gupta, John Stamatoyannopoulos, Timothy Bailey, William Noble posted to method motif_comparison motif_finding by cwbrown on 2007-03-29 21:08:57 as along with 6 people and 1 group jlike Dulce maximilianh grahamc nklee gracio EisenLab
	Origin and diversification of the basic helix-loop-helix gene family in metazoans: insights from comparative genomics [My Copy] BMC Evolutionary Biology, Vol. 7 (02 March 2007), 33. by Elena Simionato, Valerie Ledent, Gemma Richards, et al.Morgane Thomas-Chollier, Pierre Kerner, David Coornaert, Bernard M. Degnan, Michel Vervoort posted to evolution helix_loop_helix protein_families transcription_factor by cwbrown on 2007-03-29 21:06:28 as along with 3 people and 1 group druvus syoung11 zwang EisenLab
	H2A.Z-Mediated Localization of Genes at the Nuclear Periphery Confers Epigenetic Memory of Previous Transcriptional State [My Copy] PLoS Biol, Vol. 5, No. 4. (20 March 2007), e81. by Donna G. Brickner, Ivelisse Cajigas, Yvonne Fondufe-Mittendorf, et al.Sara Ahmed, Pei-Chih Lee, Jonathan Widom, Jason H. Brickner posted to chromatin histone_variants subnuclear_localization transcriptional_memory by cwbrown on 2007-03-29 21:04:23 as along with 1 person and 1 group ceft EisenLab
	Phenotypic Plasticity in Drosophila Pigmentation Caused by Temperature Sensitivity of a Chromatin Regulator Network [My Copy] PLoS Genetics, Vol. 3, No. 2. (1 February 2007), e30. by Jean-Michel Gibert, Frédérique Peronnet, Christian Schlötterer posted to no-tag by cwbrown on 2007-03-29 20:51:41 as along with 2 people and 2 groups lindseyfallis brant Morgan Lab-KSU EisenLab
	Analysis of In-Vivo LacR-Mediated Gene Repression Based on the Mechanics of DNA Looping. [My Copy] PLoS ONE, Vol. 1 (2006) by Y. Zhang, A. E. McEwen, D. M. Crothers, S. D. Levene posted to dna_binding dna_looping e_coli transcription_factor by cwbrown on 2007-03-29 20:46:46 as along with 1 group EisenLab
	DNA Familial Binding Profiles Made Easy: Comparison of Various Motif Alignment and Clustering Strategies [My Copy] PLoS Computational Biology, Vol. preprint, No. 2007. (1 February 2007), e61.eor. by Shaun Mahony, Philip Auron, Panayiotis Benos posted to dna_binding method motifs transcription_factor by cwbrown on 2007-03-29 20:45:40 as along with 1 group EisenLab
	Identification of the Imprinted KLF14 Transcription Factor Undergoing Human-Specific Accelerated Evolution [My Copy] PLoS Genetics, Vol. preprint, No. 2007. (1 March 2007), e65.eor. by Layla Parker-Katiraee, Andrew R. Carson, Takahiro Yamada, et al.Philippe Arnaud, Robert Feil, Sayeda N. Abu-Amero, Gudrun Moore, Masahiro Kaneda, George Perry, Anne C. Stone, Charles Lee, Makiko Meguro-Horike, Hiroyuki Sasaki, Keiko Kobayashi, Kazuhiko Nakabayashi, Stephen W. Scherer posted to evolution human transcription_factor by cwbrown on 2007-03-29 20:43:05 as along with 2 people and 1 group dpollard epigenetics EisenLab
	Reprogrammable recognition codes in bicoid homeodomain-DNA interaction. [My Copy] Mol Cell Biol, Vol. 20, No. 20. (October 2000), pp. 7673-7684. by V. Dave, C. Zhao, F. Yang, C. S. Tung, J. Ma posted to dna_binding structure transcription_factor by cwbrown on 2007-03-02 19:36:34 as along with 1 group EisenLab
	A "Silent" Polymorphism in the MDR1 Gene Changes Substrate Specificity [My Copy] Science, Vol. 315, No. 5811. (26 January 2007), pp. 525-528. by Chava Kimchi-Sarfaty, Jung M. Oh, In-Wha Kim, et al.Zuben E. Sauna, Anna M. Calcagno, Suresh V. Ambudkar, Michael M. Gottesman posted to synonymous_sites protein_folding protein_evolution by cwbrown on 2007-01-25 20:02:57 as along with 10 people and 3 groups ajbattle songpku koller bicko dpollard gpalidwor dchughes massivemayhem shawnh msafi EisenLab G4ID Genetics-of-Gambling
	Theories of adaptation: what they do and don't say. [My Copy] Genetica, Vol. 123, No. 1-2. (February 2005), pp. 3-13. by H. A. Orr posted to adaptation evolution phenotype sequence theory by cwbrown on 2006-03-11 03:27:06 as along with 3 people and 2 groups stevanspringer ryang cmm EisenLab FAB-lab

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transcription_factor	8
dna_binding	6
chromatin	4
enhancer_function	4
lab_library	4
evolution	3
method	3
motif_finding	3
review	3
transcriptional_regulatory_complex	3
core_transcription_machinery	2
e_coli	2
enhancer_prediction	2
histone_variants	2
human	2
mammals	2
meiotic_drive	2
population_genetics	2
sea_urchin	2
sex_ratio_evolution	2
single_molecule	2
structure	2
subnuclear_localization	2
adaptation	1
alcohol	1
algorithm	1
chip-chip	1
chromatin_remodeling	1
ciona	1
coevolution	1
combinatorial_regulation	1
directed_evolution	1
dna_binding_affinity	1
dna_looping	1
dna_replication	1
gastroenterology	1
gene_expression_evolution	1
helix_loop_helix	1
homeobox	1
mass_spec	1
modeling	1
molecular_evolution	1
motif_comparison	1
motifs	1
nucleosome_mapping	1
pfam	1
phenotype	1
phenotypic_evolution	1
plant-pathogen_interaction	1
protein_domains	1
protein_evolution	1
protein_families	1
protein_folding	1
sequence	1
software	1
speed_eating	1
synonymous_sites	1
theory	1
thermodynamics	1
transcriptional_memory	1
type_iii_secretion	1
ultraconserved_elements	1
whole_genome	1
yeast	1

cwbrown's library 40 articles Export

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