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dansullivanblk's no-tag [61 articles]

Recent papers added to dansullivanblk's library classified by the tag no-tag. You can also see everyone's no-tag.
  • Literature mining for the biologist: from information retrieval to biological discovery
    Nature Reviews Genetics, Vol. 7, No. 2., pp. 119-129.
    by Lars J Jensen, Jasmin Saric, Peer Bork
    posted to no-tag by dansullivanblk on 2008-10-10 20:53:19 as ** along with 27 people and 3 groups yggdrasil Enro jyuh kuhn yas dullhunk hpiwowar dgront caporaso zlu jacky957 lynnefox jdiggans cjeans ghattem michaelmampaey dejori jandot mircea farzanehs larsjuhljensen adoms skumagai TheresaNiederberger satre akastrin ibuch T_lab biomedical-nlp ADMiRes
  • Survey of publish subscribe event systems
    (2003)
    by Ying Liu, Beth Plale
    posted to no-tag by dansullivanblk on 2008-10-09 18:43:49 as **
  • Scalable Concurrent Priority Queue Algorithms
    (1999), pp. 113-122.
    by Nir Shavit, Asaph Zemach
    posted to no-tag by dansullivanblk on 2008-10-09 18:42:04 as **
  • MODELING OPERATING SYSTEMS SCHEDULERS WIT MULTI-STACK-QUEUE GRAMMARS
    by Luca Breveglieri, Stefano C Reghizzi, Alessandra Cherubini
    posted to no-tag by dansullivanblk on 2008-10-09 18:39:59 as **
  • Fair Operation of Multi-Server and Multi-Queue Systems ABSTRACT
    by David Raz
    posted to no-tag by dansullivanblk on 2008-10-09 18:38:12 as **
  • Queueing System
    by Mathias Dummler, Mathias Dummler
    posted to no-tag by dansullivanblk on 2008-10-09 18:37:24 as **
  • Queueing analysis of relational operators for continuous data streams
    (2003), pp. 271-278.
    by Qingchun Jiang
    posted to no-tag by dansullivanblk on 2008-10-09 18:35:42 as **
  • Integrating bioinformatics, distributed data management, and distributed computing for applied training in high performance computing
    (2007), pp. 33-36.
    by Michael D Kane, John A Springer
    posted to no-tag by dansullivanblk on 2008-10-03 20:44:43 as **
  • Scalable exploration of physical database design
    (2006)
    by Arnd C König
    posted to no-tag by dansullivanblk on 2008-10-02 16:01:00 as **
  • Physical design refinement: The “Merge-Reduce” approach
    (2006)
    by Nicolas Bruno, Surajit Chaudhuri
    posted to no-tag by dansullivanblk on 2008-10-02 16:00:25 as **
  • OceanStore: An architecture for global-scale persistent storage
    (2000)
    by John Kubiatowicz, David Bindel, Yan Chen, Steven Czerwinski, Patrick Eaton, Dennis Geels, Ramakrishna Gummadi, Sean Rhea, Hakim Weatherspoon, Westley Weimer, Chris Wells, Ben Zhao
    posted to no-tag by dansullivanblk on 2008-10-02 15:57:04 as **
  • A taxonomy of data grids for distributed data sharing, management, and processing
    ACM Computing Surveys, Vol. 38 (2007)
    by Srikumar Venugopal, Rajkumar Buyya, Ramamohanarao Kotagiri
    posted to no-tag by dansullivanblk on 2008-10-02 15:55:14 as **
  • Efficient data access for parallel blast
    (2005)
    by Heshan Lin, Xiaosong Ma, Praveen
    posted to no-tag by dansullivanblk on 2008-10-02 15:53:49 as **
  • The Connectivity Map: using gene-expression signatures to connect small molecules, genes, and disease.
    Science, Vol. 313, No. 5795. (29 September 2006), pp. 1929-1935.
    by J Lamb, ED Crawford, D Peck, JW Modell, IC Blat, MJ Wrobel, J Lerner, JP Brunet, A Subramanian, KN Ross, M Reich, H Hieronymus, G Wei, SA Armstrong, SJ Haggarty, PA Clemons, R Wei, SA Carr, ES Lander, TR Golub
    posted to no-tag by dansullivanblk on 2008-09-22 21:02:14 as ** along with 22 people and 9 groups BragilMassoud jyuh kuhn jfr yas balajis marcius lhonigberg neveaire kengg ealloza koller mlovell jdiggans ezra jeremymiller frohike massivemayhem lp2 pablomendes jdiezperezj askrajiv Biostatistics Computational-Genomics Bioinformatics Neuroscience T_lab BioinfoCIPF SGU-CIPF GeschwindLab Plantandetc
  • SuperTarget and Matador: resources for exploring drug-target relationships.
    Nucleic Acids Res (16 October 2007)
    by Stefan Günther, Michael Kuhn, Mathias Dunkel, Monica Campillos, Christian Senger, Evangelia Petsalaki, Jessica Ahmed, Eduardo Garcia G Urdiales, Andreas Gewiess, Lars Juhl J Jensen, Reinhard Schneider, Roman Skoblo, Robert B B Russell, Philip E E Bourne, Peer Bork, Robert Preissner
    posted to no-tag by dansullivanblk on 2008-09-16 20:14:08 as ** along with 8 people zimbo1 jyuh mdimmic chad_davis daevans massivemayhem Evangelia larsjuhljensen
  • The tYNA platform for comparative interactomics: a web tool for managing, comparing and mining multiple networks
    Bioinformatics, Vol. 22, No. 23. (1 December 2006), pp. 2968-2970.
    by Yip, Y Kevin, Yu, Haiyuan, Kim, M Philip, Schultz, Martin, Gerstein, Mark
    posted to no-tag by dansullivanblk on 2008-09-11 16:01:39 as **
  • ONTO-PERL: An API supporting the development and analysis of bio-ontologies.
    Bioinformatics (1 February 2008)
    by E Antezana, M Egaña, B De Baets, M Kuiper, V Mironov
    posted to no-tag by dansullivanblk on 2008-09-10 14:23:39 as *** along with 4 people and 1 group jyuh dullhunk RockHI sobolevnrm baker-group
  • Solving the Problem of Trans-Genomic Query with Alignment Tables
    IEEE/ACM Transactions on Computational Biology and Bioinformatics, Vol. 5, No. 3. (2008), pp. 432-447.
    by Douglass S Parker, Ruey L Hsiao, Yi Xing, Alissa M Resch, Christopher J Lee
    posted to no-tag by dansullivanblk on 2008-09-03 14:35:45 as **
  • The Drug Ontology Project for Elsevier An RDF Architecture Enabling Thesaurus-Driven Data Integration
    by J Broekstra, C Fluit, A Kampman, F Van Harmelen, H Stuckenschmidt
    posted to no-tag by dansullivanblk on 2008-09-02 20:04:01 as **
  • Genome-wide application of RNAi to the discovery of potential drug targets
    FEBS Letters, Vol. 579, No. 26. (31 October 2005), pp. 5988-5995.
    by Masanori Ito, Kenji Kawano, Makoto Miyagishi, Kazunari Taira
    posted to no-tag by dansullivanblk on 2008-09-02 18:56:17 as **
  • Prioritizing Genomic Drug Targets in Pathogens: Application to Mycobacterium tuberculosis
    PLoS Computational Biology, Vol. 2, No. 6. (1 June 2006), e61.
    by Samiul Hasan, Sabine Daugelat, Srinivasa PS Rao, Mark Schreiber
    posted to no-tag by dansullivanblk on 2008-09-02 18:45:49 as ** along with 1 person and 1 group caporaso biomedical-nlp
  • Targeting Bacterial Secretion Systems: Benefits of Disarmament in the Microcosm
    Infectious Disorders - Drug Targets, Vol. 7 (2007), pp. 19-27.
    by Christian
    posted to no-tag by dansullivanblk on 2008-09-02 18:38:43 as **
  • Holding Back the Tide of Antibiotic Resistance
    Chemistry & Biology, Vol. 13, No. 1. (January 2006), pp. 1-3.
    by Wendy Wolfson
    posted to no-tag by dansullivanblk on 2008-09-02 18:29:30 as **
  • Antibacterial lysine analogs that target lysine riboswitches
    Nat Chem Biol, Vol. 3, No. 1. (January 2007), pp. 44-49.
    by Kenneth F Blount, Joy X Wang, Jinsoo Lim, Narasimhan Sudarsan, Ronald R Breaker
    posted to no-tag by dansullivanblk on 2008-09-02 18:21:52 as **
  • Riboswitching off bacterial growth
    Nature Reviews Drug Discovery, Vol. 6, No. 1. (15 December 2006), pp. 23-23.
    by Joanna Owens
    posted to no-tag by dansullivanblk on 2008-09-02 18:21:33 as ** along with 1 person and 2 groups jmrivort G-quadruplex Supramolecular
  • HMDB: the Human Metabolome Database.
    Nucleic Acids Res, Vol. 35, No. Database issue. (January 2007)
    by DS Wishart, D Tzur, C Knox, R Eisner, AC Guo, N Young, D Cheng, K Jewell, D Arndt, S Sawhney, C Fung, L Nikolai, M Lewis, MA Coutouly, I Forsythe, P Tang, S Shrivastava, K Jeroncic, P Stothard, G Amegbey, D Block, DD Hau, J Wagner, J Miniaci, M Clements, M Gebremedhin, N Guo, Y Zhang, GE Duggan, GD Macinnis, AM Weljie, R Dowlatabadi, F Bamforth, D Clive, R Greiner, L Li, T Marrie, BD Sykes, HJ Vogel, L Querengesser
    posted to no-tag by dansullivanblk on 2008-09-02 18:01:01 as ** along with 2 people frohike massivemayhem
  • Towards a semantic medical Web: HealthCyberMap's tool for building an RDF metadata base of health information resources based on the Qualified Dublin Core Metadata Set.
    Med Sci Monit, Vol. 8, No. 7. (July 2002)
    by MN Boulos, AV Roudsari, ER Carson
    posted to no-tag by dansullivanblk on 2008-09-01 20:58:18 as ** along with 1 person ville
  • DrugBank: a comprehensive resource for in silico drug discovery and exploration.
    Nucleic Acids Res, Vol. 34, No. Database issue. (1 January 2006)
    by DS Wishart, C Knox, AC Guo, S Shrivastava, M Hassanali, P Stothard, Z Chang, J Woolsey
    posted to no-tag by dansullivanblk on 2008-09-01 20:35:16 as ** along with 7 people and 2 groups kuhn maryee sangeetha madhadron jdiggans massivemayhem elvinado Bioinformatics insilicodrug
  • Tamoxifen to Systemic Lupus Erythematosus: Constructing a Semantic Infrastructure to Enable Mechanism-based Reasoning and Inference from Drugs to Diseases
    (20 July 2008)
    by Angela
    edited by Phillip, Nigam, Susanna-Assunta, Matthew
    posted to no-tag by dansullivanblk on 2008-09-01 17:05:59 as **
  • DERI-TR-2007-11-07.pdf (application/pdf Object)
    (November 2007)
    by Christian, Giovanni
    posted to no-tag by dansullivanblk on 2008-08-20 18:38:16 as **
  • Towards a cyberinfrastructure for the biological sciences: progress, visions and challenges
    Nat Rev Genet, Vol. 9, No. 9. (2008), pp. 678-688.
    by Lincoln D Stein
    posted to no-tag by dansullivanblk on 2008-08-19 18:53:26 as ** along with 20 people and 4 groups nuin rdiaz bmaust jyuh carolh12 ilya alaninmcr druvus srp33 dullhunk tharris stajich mrochman neils jandot GustavoLacerda jago fgibson thomaskelder sjcockell Berkeley Mycology Global_health_enterprise_architecture Knowledge_Economy_Reform kpa-resources
  • A Semantic Web for bioinformatics: goals, tools, systems, applications.
    BMC bioinformatics, Vol. 9 Suppl 4 (2008)
    by N Cannata, M Schröder, R Marangoni, P Romano
    posted to no-tag by dansullivanblk on 2008-08-07 22:14:50 as ** along with 3 people jyuh mariakmejia bootsy
  • Enterprise information integration: successes, challenges and controversies
    (2005), pp. 778-787.
    by Alon Y Halevy, Naveen Ashish, Dina Bitton, Michael Carey, Denise Draper, Jeff Pollock, Arnon Rosenthal, Vishal Sikka
    posted to no-tag by dansullivanblk on 2008-08-07 19:24:19 as ** along with 2 people lillejul lei
  • Data integration through database federation
    IBM Systems Journal, Vol. 41, No. 4. (2002)
    by Haas
    posted to no-tag by dansullivanblk on 2008-08-07 14:36:57 as ** along with 1 person lei
  • Quantitative Proteomics of the Archaeon Methanococcus maripaludis Validated by Microarray Analysis and Real Time PCR
    Mol Cell Proteomics, Vol. 5, No. 5. (1 May 2006), pp. 868-881.
    by Qiangwei Xia, Erik L Hendrickson, Yi Zhang, Tiansong Wang, Fred Taub, Brian C Moore, Iris Porat, William B Whitman, Murray Hackett, John A Leigh
    posted to no-tag by dansullivanblk on 2008-08-06 21:53:44 as **
  • Metagenomics for studying unculturable microorganisms: cutting the Gordian knot
    Genome Biology, Vol. 6, No. 8. (2005)
    by Patrick Schloss, Jo Handelsman
    posted to no-tag by dansullivanblk on 2008-08-06 21:39:04 as **
  • Microarray expression profiling of Arabidopsis thaliana L. in response to allelochemicals identified in buckwheat
    J. Exp. Bot. (4 July 2008), ern168.
    by Anna Golisz, Mami Sugano, Yoshiharu Fujii
    posted to no-tag by dansullivanblk on 2008-08-06 21:13:07 as **
  • Oxidative Damage to Mitochondrial Complex I Due to Peroxynitrite: IDENTIFICATION OF REACTIVE TYROSINES BY MASS SPECTROMETRY
    J. Biol. Chem., Vol. 278, No. 39. (26 September 2003), pp. 37223-37230.
    by James Murray, Steven W Taylor, Bing Zhang, Soumitra S Ghosh, Roderick A Capaldi
    posted to no-tag by dansullivanblk on 2008-08-06 21:05:34 as **
  • Introduction to Persistent Uniform Resource Locators
    http://purl.oclc.org/docs/inet96.html
    by Keith
    posted to no-tag by dansullivanblk on 2008-08-06 16:06:51 as **
  • Introducing Context into RDF Knowledge Bases
    (2005)
    by Paolo Bouquet, Luciano Serafini, Heiko Stoermer
    posted to no-tag by dansullivanblk on 2008-08-06 15:44:27 as ** along with 1 person diogomartins
  • TriX : RDF Triples in XML
    HP Technical Reports, No. HPL-2004-56. (2004)
    by Jeremy J Carroll
    posted to no-tag by dansullivanblk on 2008-08-06 15:34:38 as **
  • Management of Meta Knowledge for RDF Repositories
    Semantic Computing, 2007. ICSC 2007. International Conference on (2007), pp. 543-550.
    by Bernhard Schueler, Sergej Sizov, Steffen Staab
    posted to no-tag by dansullivanblk on 2008-08-04 16:19:59 as **
  • Design and implementation of microarray gene expression markup language (MAGE-ML).
    Genome Biol, Vol. 3, No. 9. (23 August 2002)
    by PT Spellman, M Miller, J Stewart, C Troup, U Sarkans, S Chervitz, D Bernhart, G Sherlock, C Ball, M Lepage, M Swiatek, WL Marks, J Goncalves, S Markel, D Iordan, M Shojatalab, A Pizarro, J White, R Hubley, E Deutsch, M Senger, BJ Aronow, A Robinson, D Bassett, CJ Stoeckert, A Brazma
    posted to no-tag by dansullivanblk on 2008-08-01 15:16:02 as ** along with 3 people and 1 group shikin irenas katerinakal dbk-lab
  • Conceptual modeling for ETL processes
    (2002)
    by P Vassiliadis, A Simitsis, S Skiadopoulos
    posted to no-tag by dansullivanblk on 2008-07-29 20:50:08 as **
  • GORouter: an RDF model for providing semantic query and inference services for Gene Ontology and its associations
    BMC Bioinformatics, Vol. 9, No. Suppl 1. (2008)
    by Qingwei Xu, Yixiang Shi, Qiang Lu, Guoqing Zhang, Qingming Luo, Yixue Li
    posted to no-tag by dansullivanblk on 2008-07-29 19:08:58 as ** along with 2 people eckart_bindewald jyuh
  • PATRIC: The VBI PathoSystems Resource Integration Center
    Nucleic Acids Research, Vol. 35, No. Supplement 1. (January 2007), pp. D401-D406.
    by Snyder, , Kampanya, , Lu, , Nordberg, , Karur, , Shukla, , Soneja, , Tian, , Xue, , Yoo, , Zhang, , Dharmanolla, , Dongre, , Gillespie, , Hamelius, , Hance, , Huntington, , Jukneliene, , Koziski, , Mackasmiel, , Mane, , Nguyen, , Purkayastha, , Shallom, , Yu, , Guo, , Gabbard, , Hix, , Azad, , Baker, , Boyle, , Khudyakov, , Meng, , Rupprecht, , Vinje, , Crasta, , Czar, , Dickerman, , Eckart, , Kenyon, , Will, , Setubal, , Sobral,
    posted to no-tag by dansullivanblk on 2008-07-29 16:37:38 as **
  • The Protein Identifier Cross-Reference (PICR) service: reconciling protein identifiers across multiple source databases
    BMC Bioinformatics, Vol. 8, No. 1. (2007)
    by Richard Cote, Philip Jones, Lennart Martens, Samuel Kerrien, Florian Reisinger, Quan Lin, Rasko Leinonen, Rolf Apweiler, Henning Hermjakob
    posted to no-tag by dansullivanblk on 2008-07-29 14:45:53 as ** along with 8 people jyuh dullhunk niallhaslam antonkratz gmonce barriot tny kynn
  • : towards the modeling, design, control and execution of ETL processes
    Information Systems, Vol. 26, No. 8. (December 2001), pp. 537-561.
    by Panos Vassiliadis, Zografoula Vagena, Spiros Skiadopoulos, Nikos Karayannidis, Timos Sellis
    posted to no-tag by dansullivanblk on 2008-07-25 15:28:47 as **
  • State of the nation in data integration for bioinformatics.
    J Biomed Inform (5 February 2008)
    by Carole Goble, Robert Stevens
    posted to no-tag by dansullivanblk on 2008-07-24 16:46:54 as ** along with 4 people dullhunk cjhall alanrw winterschlaefer
  • Advancing translational research with the Semantic Web
    BMC Bioinformatics, Vol. 8, No. Suppl 3. (2007)
    by Alan Ruttenberg, Tim Clark, William Bug, Matthias Samwald, Olivier Bodenreider, Helen Chen, Donald Doherty, Kerstin Forsberg, Yong Gao, Vipul Kashyap, June Kinoshita, Joanne Luciano, Scott M Marshall, Chimezie Ogbuji, Jonathan Rees, Susie Stephens, Gwendolyn Wong, Elizabeth Wu, Davide Zaccagnini, Tonya Hongsermeier, Eric Neumann, Ivan Herman, Kei H Cheung
    posted to no-tag by dansullivanblk on 2008-07-24 16:40:35 as ** along with 13 people and 1 group jyuh Cortel wnpx dullhunk hpiwowar egonw suizan jasonbobe ibuch PredictER bmaust benfqt Gaetan Evidence-based-medicine
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