dbensasson's library 106 articles Export

	From elements to modules: regulatory evolution in Ascomycota fungi. [My Copy] Current opinion in genetics & development (28 October 2009) by Dana J. Wohlbach, Dawn Anne A. Thompson, Audrey P. Gasch, Aviv Regev posted to yeast genomics by dbensasson on 2009-11-07 15:05:53 as
	Generation of a large set of genetically tractable haploid and diploid Saccharomyces strains. [My Copy] FEMS yeast research (17 September 2009) by Francisco A. Cubillos, Edward J. Louis, Gianni Liti posted to saccharomyces experimental_evolution cerevisiae by dbensasson on 2009-10-23 14:19:24 as
	Global distribution of genomic diversity underscores rich complex history of continental human populations [My Copy] Genome Research, Vol. 19, No. 5. (May 2009), pp. 795-803. by Adam Auton, Katarzyna Bryc, Adam R. Boyko, et al.Kirk E. Lohmueller, John Novembre, Andy Reynolds, Amit Indap, Mark H. Wright, Jeremiah D. Degenhardt, Ryan N. Gutenkunst, Karen S. King, Matthew R. Nelson, Carlos D. Bustamante posted to pop_gen human by dbensasson on 2009-10-21 14:15:14 as along with 4 people psique xingxu daforerog djkt
	Evaluation of next generation sequencing platforms for population targeted sequencing studies [My Copy] Genome Biology, Vol. 10, No. 3. (2009), R32. by Olivier Harismendy, Pauline Ng, Robert Strausberg, et al.Xiaoyun Wang, Timothy Stockwell, Karen Beeson, Nicholas Schork, Sarah Murray, Eric Topol, Samuel Levy, Kelly Frazer posted to no-tag by dbensasson on 2009-10-21 14:12:15 as along with 22 people and 2 groups GustavoLacerda adijr agbiotec jgill darian jandot n00c jonilaserson maren inesdesantiago mlog ppgardne kiekyon michaelbarton idoerg stajich skembel giovanni druvus lwaldron djkt natstreet Journal picks Mycology
	Heterochromatin links to centromeric protection by recruiting shugoshin. [My Copy] Nature, Vol. 455, No. 7210. (11 September 2008), pp. 251-255. by Yuya Yamagishi, Takeshi Sakuno, Mari Shimura, Yoshinori Watanabe posted to yeast centromeres by dbensasson on 2009-10-20 16:48:32 as
	Studies of meiosis disclose distinct roles of cohesion in the core centromere and pericentromeric regions. [My Copy] Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology, Vol. 17, No. 2. (1 February 2009), pp. 239-249. by Takeshi Sakuno, Yoshinori Watanabe posted to yeast centromeres by dbensasson on 2009-10-20 16:48:04 as
	The conserved kinetochore protein shugoshin protects centromeric cohesion during meiosis [My Copy] Nature, Vol. 427, No. 6974. (18 January 2004), pp. 510-517. by Tomoya S. Kitajima, Shigehiro A. Kawashima, Yoshinori Watanabe posted to yeast cerevisiae centromeres by dbensasson on 2009-10-20 16:19:43 as
	Segregating YKU80 and TLC1 alleles underlying natural variation in telomere properties in wild yeast. [My Copy] PLoS genetics, Vol. 5, No. 9. (September 2009) by Gianni Liti, Svasti Haricharan, Francisco A. Cubillos, et al.Anna L. Tierney, Sarah Sharp, Alison A. Bertuch, Leopold Parts, Elizabeth Bailes, Edward J. Louis posted to qtl pop_gen cerevisiae by dbensasson on 2009-09-28 20:51:14 as
	The tRNA-Tyr Gene Family of Saccharomyces cerevisiae: Agents of Phenotypic Variation and Position Effects on Mutation Frequency [My Copy] Genetics, Vol. 161, No. 4. (1 August 2002), pp. 1395-1410. by Sayoko Ito-Harashima, Phillip E. Hartzog, Himanshu Sinha, John H. Mccusker posted to mutation cerevisiae by dbensasson on 2009-08-11 13:30:46 as
	Variation in efficiency of DNA mismatch repair at different sites in the yeast genome [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 102, No. 24. (14 June 2005), pp. 8639-8643. by Joshua D. Hawk, Lela Stefanovic, Jayne C. Boyer, Thomas D. Petes, Rosann A. Farber posted to cerevisiae mutation by dbensasson on 2009-08-11 13:16:43 as along with 1 person lesander
	Genome sequencing and comparative analysis of Saccharomyces cerevisiae strain YJM789 [My Copy] Proceedings of the National Academy of Sciences, Vol. 104, No. 31. (31 July 2007), pp. 12825-12830. by Wu Wei, John H. Mccusker, Richard W. Hyman, et al.Ted Jones, Ye Ning, Zhiwei Cao, Zhenglong Gu, Dan Bruno, Molly Miranda, Michelle Nguyen, Julie Wilhelmy, Caridad Komp, Raquel Tamse, Xiaojing Wang, Peilin Jia, Philippe Luedi, Peter J. Oefner, Lior David, Fred S. Dietrich, Yixue Li, Ronald W. Davis, Lars M. Steinmetz posted to cerevisiae genomics pop_gen by dbensasson on 2009-08-03 13:22:11 as along with 5 people and 2 groups waszak lesander raiyar lp2 dmc steinmetzlab Durbin group
	Genome-wide identification of replication origins in yeast by comparative genomics [My Copy] Genes & Development, Vol. 20, No. 14. (15 July 2006), pp. 1874-1879. by Conrad A. Nieduszynski, Yvonne Knox, Anne D. Donaldson posted to centromeres cerevisiae genomics mutation phylogenetics by dbensasson on 2009-08-03 11:18:47 as along with 1 person and 1 group indigoviolet EisenLab
	Estimating the per-base-pair mutation rate in the yeast Saccharomyces cerevisiae. [My Copy] Genetics, Vol. 178, No. 1. (1 January 2008), pp. 67-82. by G. I. Lang, A. W. Murray posted to centromeres cerevisiae mutation by dbensasson on 2009-07-27 12:27:05 as along with 4 people and 1 group Annab benjaminsb gruberjd stajich Mycology
	Replication forks pause at yeast centromeres. [My Copy] Molecular and cellular biology, Vol. 12, No. 9. (September 1992), pp. 4056-4066. by S. A. Greenfeder, C. S. Newlon posted to centromeres cerevisiae mutation by dbensasson on 2009-07-22 16:34:37 as
	Heterochromatin revisited [My Copy] Nat Rev Genet, Vol. 8, No. 1. (January 2007), pp. 35-46. by Shiv I. S. Grewal, Songtao Jia posted to centromeres cerevisiae genomics by dbensasson on 2009-07-15 14:23:54 as along with 3 people suizifish Anders cabbagezs
	Evidence for the adaptive significance of circadian rhythms [My Copy] Ecology Letters, Vol. 9999, No. 9999. (2009) by Shai Yerushalmi, Rachel M. Green posted to ecology evolution global_warming qtl by dbensasson on 2009-07-01 16:11:57 as
	A global view of pleiotropy and phenotypically derived gene function in yeast [My Copy] Mol Syst Biol, Vol. 1, No. 1. (29 March 2005), pp. msb4100004-E1-msb4100004-E11. by Aimee M. Dudley, Daniel M. Janse, Amos Tanay, Ron Shamir, George M. Church posted to cerevisiae genomics phenotypes by dbensasson on 2009-06-10 14:07:46 as along with 9 people nicholasflann michaelbarton chihchun_chen balajis balicea i41m nirfriedman koller jiny
	Retroviruses and yeast retrotransposons use overlapping sets of host genes [My Copy] Genome Research, Vol. 15, No. 5. (May 2005), pp. 641-654. by Becky Irwin, Michael Aye, Pierre Baldi, et al.Nadejda Beliakova-Bethell, Henry Cheng, Yimeng Dou, Willy Liou, Suzanne Sandmeyer posted to cerevisiae genomics transposable_elements by dbensasson on 2009-06-10 13:36:57 as
	Undermethylation associated with retroelement activation and chromosome remodelling in an interspecific mammalian hybrid [My Copy] Nature, Vol. 393, No. 6680. (7 May 1998), pp. 68-72. by Rachel J. O'Neill, Michael J. O'Neill, Jennifer A. Graves posted to centromeres mutation speciation transposable_elements by dbensasson on 2009-06-03 10:51:18 as
	Single-step selection for Ty1 element retrotransposition [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 88, No. 3. (1 February 1991), pp. 936-940. by M. J. Curcio, D. J. Garfinkel posted to cerevisiae mutation transposable_elements by dbensasson on 2009-06-02 11:45:12 as
	MUTATIONS AFFECTING TY-MEDIATED EXPRESSION OF THE HIS4 GENE OF SACCHAROMYCES CEREVISIAE [My Copy] Genetics, Vol. 107, No. 2. (1 June 1984), pp. 179-197. by Fred Winston, Deborah T. Chaleff, Barbara Valent, Gerald R. Fink posted to cerevisiae mutation transposable_elements by dbensasson on 2009-06-02 11:44:27 as
	The mismatch repair system contributes to meiotic sterility in an interspecific yeast hybrid. [My Copy] The EMBO journal, Vol. 15, No. 7. (1 April 1996), pp. 1726-1733. by N. Hunter, S. R. Chambers, E. J. Louis, R. H. Borts posted to cerevisiae mutation speciation by dbensasson on 2009-06-01 17:18:54 as
	Saccharomyces cerevisiae: population divergence and resistance to oxidative stress in clinical, domesticated and wild isolates. [My Copy] PLoS ONE, Vol. 4, No. 4. (2009) by S. Diezmann, F. S. Dietrich posted to biogeography cerevisiae microbial_ecology phenotypes by dbensasson on 2009-06-01 13:47:13 as along with 1 person and 1 group stajich Mycology
	A Yeast Hybrid Provides Insight into the Evolution of Gene Expression Regulation [My Copy] Science, Vol. 324, No. 5927. (1 May 2009), pp. 659-662. by Itay Tirosh, Sharon Reikhav, Avraham A. Levy, Naama Barkai posted to cerevisiae genomics saccharomyces by dbensasson on 2009-06-01 13:43:15 as along with 8 people mjoach dipenps absterga djkt jbhiatt maximilianh emptyhb TRHvidsten
	Dissecting the pleiotropic consequences of a quantitative trait nucleotide. [My Copy] FEMS yeast research (23 April 2009) by Hyun Seok S. Kim, Juyoung Huh, Justin C C. Fay posted to qtl cerevisiae fungi genomics saccharomyces yeast by dbensasson on 2009-06-01 13:30:55 as
	Factors affecting the reversal of antimicrobial-drug resistance. [My Copy] The Lancet infectious diseases, Vol. 9, No. 6. (June 2009), pp. 357-364. by P. J. Johnsen, J. P. Townsend, T. Bøhn, G. S. Simonsen, A. Sundsfjord, K. M. Nielsen posted to microbial_ecology by dbensasson on 2009-06-01 13:28:17 as along with 1 person Amazoness
	The histone deacetylase Rpd3p is required for transient changes in genomic expression in response to stress [My Copy] Genome Biology, Vol. 10 (26 May 2009), R57. by Adriana Alejandro-Osorio, Dana Huebert, Dominic Porcaro, et al.Megan Sonntag, Songdet Nillasithanukroh, Jessica Will, Audrey Gasch posted to qtl cerevisiae genomics phenotypes saccharomyces yeast by dbensasson on 2009-06-01 13:24:00 as
	Metabolic footprinting as a tool for discriminating between brewing yeasts. [My Copy] Yeast (Chichester, England), Vol. 24, No. 8. (August 2007), pp. 667-679. by G. A. Pope, D. A. MacKenzie, M. Defernez, et al.M. A. Aroso, L. J. Fuller, F. A. Mellon, W. B. Dunn, M. Brown, R. Goodacre, D. B. Kell, M. E. Marvin, E. J. Louis, I. N. Roberts posted to cerevisiae saccharomyces yeast by dbensasson on 2009-05-06 14:59:15 as
	Allopatric Divergence, Secondary Contact, and Genetic Isolation in Wild Yeast Populations [My Copy] Current Biology, Vol. 17, No. 5. (06 March 2007), pp. 407-411. by Heidi A. Kuehne, Helen A. Murphy, Chantal a Francis, Paul D. Sniegowski posted to biogeography fungi microbial_ecology saccharomyces speciation yeast by dbensasson on 2009-04-22 20:52:04 as
	Carbon losses from all soils across England and Wales 1978–2003 [My Copy] Nature, Vol. 437, No. 7056., pp. 245-248. by Pat H. Bellamy, Peter J. Loveland, Ian R. Bradley, Murray R. Lark, Guy J. D. Kirk posted to global_warming by dbensasson on 2009-04-21 16:14:53 as
	The Adaptive Value of Circadian ClocksAn Experimental Assessment in Cyanobacteria [My Copy] Current Biology, Vol. 14, No. 16. (24 August 2004), pp. 1481-1486. by Mark A. Woelfle, Yan Ouyang, Kittiporn Phanvijhitsiri, Carl H. Johnson posted to ecology experimental_evolution microbial_ecology phenotypes by dbensasson on 2009-04-08 14:03:34 as
	Genetic mechanisms and evolutionary significance of natural variation in Arabidopsis [My Copy] Nature, Vol. 441, No. 7096., pp. 947-952. by Thomas Mitchell-Olds, Johanna Schmitt posted to qtl ecology evolution phenotypes by dbensasson on 2009-04-08 13:59:13 as along with 1 person maren
	Seasonality and Photoperiodism in Fungi [My Copy] J Biol Rhythms, Vol. 16, No. 4. (1 August 2001), pp. 403-414. by Till Roenneberg, Martha Merrow posted to biogeography ecology evolution fungi microbial_ecology phenotypes by dbensasson on 2009-04-08 11:48:35 as
	Enhanced fitness conferred by naturally occurring variation in the circadian clock. [My Copy] Science, Vol. 302, No. 5647. (7 November 2003), pp. 1049-1053. by T. P. Michael, P. A. Salomé, H. J. Yu, et al.T. R. Spencer, E. L. Sharp, M. A. McPeek, J. M. Alonso, J. R. Ecker, C. R. McClung posted to qtl ecology natural_history phenotypes by dbensasson on 2009-04-08 11:18:38 as along with 1 person Happybene
	New findings of Neurospora in Europe and comparisons of diversity in temperate climates on continental scales. [My Copy] Mycologia, Vol. 98, No. 4. (g 2006), pp. 550-559. by D. J. Jacobson, J. R. Dettman, R. I. Adams, et al.C. Boesl, S. Sultana, T. Roenneberg, M. Merrow, M. Duarte, I. Marques, A. Ushakova, P. Carneiro, A. Videira, L. Navarro-Sampedro, M. Olmedo, L. M. Corrochano, J. W. Taylor posted to biogeography ecology fungi microbial_ecology natural_history by dbensasson on 2009-04-07 14:33:40 as
	Circadian clocks and natural antisense RNA. [My Copy] FEBS letters, Vol. 567, No. 1. (1 June 2004), pp. 49-54. by S. K. Crosthwaite posted to fungi phenotypes by dbensasson on 2009-04-07 14:07:54 as
	Enabling a community to dissect an organism: overview of the Neurospora functional genomics project. [My Copy] Adv Genet, Vol. 57 (2007), pp. 49-96. by J. C. Dunlap, K. A. Borkovich, M. R. Henn, et al.G. E. Turner, M. S. Sachs, N. L. Glass, K. McCluskey, M. Plamann, J. E. Galagan, B. W. Birren, R. L. Weiss, J. P. Townsend, J. J. Loros, M. A. Nelson, R. Lambreghts, H. V. Colot, G. Park, P. Collopy, C. Ringelberg, C. Crew, L. Litvinkova, D. DeCaprio, H. M. Hood, S. Curilla, M. Shi, M. Crawford, M. Koerhsen, P. Montgomery, L. Larson, M. Pearson, T. Kasuga, C. Tian, M. Baştürkmen, L. Altamirano, J. Xu posted to fungi genomics by dbensasson on 2009-04-07 13:45:16 as along with 2 people and 1 group JeremyZucker bootsy MetabolicModeling
	Thermotolerance in Saccharomyces cerevisiae: the Yin and Yang of trehalose [My Copy] Trends in Biotechnology, Vol. 16, No. 11. (1 November 1998), pp. 460-468. by M. Singer posted to biogeography cerevisiae ecology evolution fungi microbial_ecology phenotypes saccharomyces yeast by dbensasson on 2009-04-06 11:07:01 as
	Neurospora from Natural Populations: A Global Study [My Copy] Fungal Genetics and Biology, Vol. 32, No. 2. (March 2001), pp. 67-92. by B. Turner posted to biogeography fungi microbial_ecology natural_history pop_gen population by dbensasson on 2009-04-01 20:40:45 as along with 1 person yangjustinc
	Timeline: Neurospora: a model of model microbes. [My Copy] Nat Rev Genet, Vol. 3, No. 5. (May 2002), pp. 397-403. by R. H. Davis, D. D. Perkins posted to evolution fungi natural_history by dbensasson on 2009-04-01 20:39:15 as along with 1 person sdinka
	Quantitative Trait Loci for the Circadian Clock in Neurospora crassa [My Copy] Genetics, Vol. 177, No. 4. (1 December 2007), pp. 2335-2347. by Tae-Sung Kim, Benjamin A. Logsdon, Sohyun Park, Jason G. Mezey, Kwangwon Lee posted to qtl fungi phenotypes by dbensasson on 2009-04-01 20:27:18 as along with 1 person and 1 group stajich Mycology
	Repetitive sequence variation and dynamics in the ribosomal DNA array of Saccharomyces cerevisiae as revealed by whole genome resequencing. [My Copy] Genome research (13 January 2009) by Stephen A A. James, Michael Jt J. O'Kelly, David M M. Carter, Robert P P. Davey, Alexander van Oudenaarden, Ian N N. Roberts posted to biogeography cerevisiae genomics pop_gen population saccharomyces yeast by dbensasson on 2009-04-01 20:19:19 as along with 1 person orzenil
	The freeze-thaw stress response of the yeast Saccharomyces cerevisiae is growth phase specific and is controlled by nutritional state via the RAS-cyclic AMP signal transduction pathway. [My Copy] Applied and environmental microbiology, Vol. 63, No. 10. (October 1997), pp. 3818-3824. by J. I. Park, C. M. Grant, P. V. Attfield, I. W. Dawes posted to cerevisiae ecology microbial_ecology saccharomyces yeast by dbensasson on 2009-04-01 15:13:55 as
	Cold response in <i>Saccharomyces cerevisiae</i>: new functions for old mechanisms [My Copy] FEMS Microbiology Reviews, Vol. 31, No. 3. (April 2007), pp. 327-341. by Jaime Aguilera, Francisca Randez-Gil, Jose A. Prieto posted to cerevisiae ecology microbial_ecology saccharomyces yeast by dbensasson on 2009-04-01 15:12:20 as along with 1 person kiekyon
	Yeast adapt to near-freezing temperatures by STRE/Msn2,4-dependent induction of trehalose synthesis and certain molecular chaperones. [My Copy] Molecular cell, Vol. 13, No. 6. (26 March 2004), pp. 771-781. by O. Kandror, N. Bretschneider, E. Kreydin, D. Cavalieri, A. L. Goldberg posted to qtl cerevisiae ecology microbial_ecology saccharomyces yeast by dbensasson on 2009-04-01 15:10:37 as
	The effect of domestication on the fungal proteome. [My Copy] Trends in genetics : TIG, Vol. 25, No. 2. (February 2009), pp. 60-63. by Antonis Rokas posted to domestication fungi genomics by dbensasson on 2009-04-01 14:58:25 as along with 5 people and 2 groups biomcgary GustavoLacerda bcondon djkt stajich Turgeon Lab Mycology
	How did Saccharomyces evolve to become a good brewer? [My Copy] Trends in Genetics, Vol. 22, No. 4. (April 2006), pp. 183-186. by Jure Piskur, Elzbieta Rozpedowska, Silvia Polakova, Annamaria Merico, Concetta Compagno posted to cerevisiae domestication saccharomyces yeast by dbensasson on 2009-04-01 14:41:45 as along with 2 people JoeBanks egralla
	Streamlining and Simplification of Microbial Genome Architecture. [My Copy] Annu Rev Microbiol (23 August 2005) by Michael Lynch posted to evolution microbial_ecology by dbensasson on 2009-03-31 14:19:53 as along with 2 people bnchakraborty madhadron
	Divergence of Transcription Factor Binding Sites Across Related Yeast Species [My Copy] Science, Vol. 317, No. 5839. (10 August 2007), pp. 815-819. by Anthony R. Borneman, Tara A. Gianoulis, Zhengdong D. Zhang, et al.Haiyuan Yu, Joel Rozowsky, Michael R. Seringhaus, Lu Y. Wang, Mark Gerstein, Michael Snyder posted to qtl cerevisiae microbial_ecology natural_history phenotypes saccharomyces yeast by dbensasson on 2009-03-30 16:44:22 as along with 22 people and 2 groups pradiptaray gdb fenghezi caseybrown bryankr aalibes chad_davis dpollard djkt mikaelhuss lusk cjeans sujaikumar zwang GustavoLacerda Jporci maximilianh cisevol njcitulike emptyhb nklee anka EisenLab cis-regulatory-evolution
	The Transcriptional Landscape of the Yeast Genome Defined by RNA Sequencing [My Copy] Science, Vol. 320, No. 5881. (6 June 2008), pp. 1344-1349. by Ugrappa Nagalakshmi, Zhong Wang, Karl Waern, et al.Chong Shou, Debasish Raha, Mark Gerstein, Michael Snyder posted to cerevisiae genomics saccharomyces yeast by dbensasson on 2009-03-30 15:06:35 as along with 22 people and 1 group GustavoLacerda debasis cfvillalta rdowell poschm jmcq waszak michaelbarton djkt urgi stajich semrich caseybrown gjuggler Retchless biomcgary GeeSharpMinor mapplab faion bpcusack guhjy shurjo Mycology

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yeast	48
cerevisiae	42
genomics	33
saccharomyces	31
microbial_ecology	23
ecology	21
phenotypes	19
biogeography	18
evolution	17
natural_history	17
qtl	13
fungi	12
pop_gen	12
population	12
mutation	10
human	9
centromeres	8
numts	8
speciation	7
domestication	5
experimental_evolution	5
primate	4
transposable_elements	4
insect	3
global_warming	2
phylogenetics	2
mtdna	1

dbensasson's library 106 articles Export

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