dbikard's synthetic_biology [103 articles] Export

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	Synthetic biology: Engineering Escherichia coli to see light [My Copy] Nature, Vol. 438, No. 7067. (24 November 2005), pp. 441-442. by Anselm Levskaya, Aaron A. Chevalier, Jeffrey J. Tabor, et al.Zachary B. Simpson, Laura A. Lavery, Matthew Levy, Eric A. Davidson, Alexander Scouras, Andrew D. Ellington, Edward M. Marcotte, Christopher A. Voigt posted to transduction synthetic_biology light escherichia_coli by dbikard on 2009-11-25 08:52:02 as along with 4 people and 3 groups abhishek_tiwari ClaireFB marcius dansullivanblk Synthetic Biology BioinfoCIPF SGU-CIPF
	Construction of a genetic toggle switch in Escherichia coli [My Copy] Nature, Vol. 403, No. 6767. (20 January 2000), pp. 339-342. by Timothy S. Gardner, Charles R. Cantor, James J. Collins posted to synthetic_biology switch by dbikard on 2009-11-23 14:05:40 as along with 13 people and 1 group joseph_x_zhou genocad sjayanthi marcio rdowell reidw Borelli ClaireFB lenov rklancer satsumakenji tvdbulck austin bioNetwork_sysBio
	Positive feedback in eukaryotic gene networks: cell differentiation by graded to binary response conversion [My Copy] The EMBO Journal, Vol. 20, No. 10. (15 May 2001), pp. 2528-2535. by Attila Becskei, Bertrand Seraphin, Luis Serrano posted to synthetic_biology switch noise gene_expression feedback by dbikard on 2009-11-20 14:52:43 as
	Novel Electrochemically Active Bacterium Phylogenetically Related to Arcobacter butzleri, Isolated from a Microbial Fuel Cell [My Copy] Appl. Environ. Microbiol., Vol. 75, No. 23. (1 December 2009), pp. 7326-7334. by Viatcheslav Fedorovich, Matthew C. Knighton, Eulyn Pagaling, F. Bruce Ward, Andrew Free, Igor Goryanin posted to synthetic_biology energy electron_acceptors electricity bacteria by dbikard on 2009-11-20 10:34:44 as
	Synthetic Gene Networks That Count [My Copy] Science, Vol. 324, No. 5931. (29 May 2009), pp. 1199-1202. by Ari E. Friedland, Timothy K. Lu, Xiao Wang, David Shi, George Church, James J. Collins posted to synthetic_biology gene_networks by dbikard on 2009-11-09 13:53:06 as along with 15 people pyjamashark abhishek_tiwari mjoach myzhang reyez austin alexknight twatanab kshundyak phoenixzxl sen_cheng leliavski jbhiatt jjray dswan
	Automated unrestricted multigene recombineering for multiprotein complex production [My Copy] Nature Methods, Vol. 6, No. 6. (03 May 2009), pp. 447-450. by Christoph Bieniossek, Yan Nie, Daniel Frey, et al.Natacha Olieric, Christiane Schaffitzel, Ian Collinson, Christophe Romier, Philipp Berger, Timothy J. Richmond, Michel O. Steinmetz, Imre Berger posted to synthetic_biology recombinant_protein gene_expression escherichia_coli by dbikard on 2009-11-05 19:39:09 as along with 3 people austin zwang guhjy
	Design Parameters to Control Synthetic Gene Expression in Escherichia coli [My Copy] PLoS ONE, Vol. 4, No. 9. (14 September 2009), e7002. by Mark Welch, Sridhar Govindarajan, Jon E. Ness, et al.Alan Villalobos, Austin Gurney, Jeremy Minshull, Claes Gustafsson posted to synthetic_gene synthetic_dna synthetic_biology genetic_code gene_expression by dbikard on 2009-11-05 14:39:25 as along with 6 people and 1 group RasmusJensen pala0088 jjray Vincent_Rouilly michaelbarton bmduggan Synthetic Biology
	Cells need safety valves [My Copy] BioEssays, Vol. 31, No. 7. (2009), pp. 769-773. by Antoine Danchin posted to synthetic_biology permeases osmotic_pressure lactose_operon by dbikard on 2009-11-05 06:00:56 as along with 1 person cambray
	Automated design of synthetic ribosome binding sites to control protein expression. [My Copy] Nature biotechnology, Vol. 27, No. 10. (04 October 2009), pp. 946-950. by Howard M. Salis, Ethan A. Mirsky, Christopher A. Voigt posted to synthetic_biology ribosome_binding_site optimization methods gene_expression by dbikard on 2009-10-14 15:12:01 as along with 4 people and 1 group pmalkus johntheap mhamidi michaelbarton BergmanLab
	Computational design of receptor and sensor proteins with novel functions [My Copy] Nature, Vol. 423, No. 6936. (08 May 2003), pp. 185-190. by Loren L. Looger, Mary A. Dwyer, James J. Smith, Homme W. Hellinga posted to synthetic_biology protein_structure ligand_binding computational_design by dbikard on 2009-10-13 10:37:48 as along with 4 people and 1 group whitead antonkratz dfgreen dgront Jiang Research Group
	Creating Bacterial Strains from Genomes That Have Been Cloned and Engineered in Yeast [My Copy] Science, Vol. 325, No. 5948. (25 September 2009), pp. 1693-1696. by Carole Lartigue, Sanjay Vashee, Mikkel A. Algire, et al.Ray-Yuan Chuang, Gwynedd A. Benders, Li Ma, Vladimir N. Noskov, Evgeniya A. Denisova, Daniel G. Gibson, Nacyra Assad-Garcia, Nina Alperovich, David W. Thomas, Chuck Merryman, Clyde A. Hutchison, Hamilton O. Smith, J. Craig Venter, John I. Glass posted to synthetic_biology by dbikard on 2009-09-30 12:41:28 as along with 6 people and 1 group abhishek_tiwari viren4388 ramonvidal zwang jbhiatt dswan Synthetic Biology
	Engineering for biofuels: exploiting innate microbial capacity or importing biosynthetic potential? [My Copy] Nature Reviews Microbiology, Vol. 7, No. 10. (01 October 2009), pp. 715-723. by Hal Alper, Gregory Stephanopoulos posted to synthetic_biology biofuel by dbikard on 2009-09-23 18:40:54 as along with 2 people zwang Vincent_Rouilly
	Complete Chemical Synthesis, Assembly, and Cloning of a Mycoplasma genitalium Genome [My Copy] Science, Vol. 319, No. 5867. (29 February 2008), pp. 1215-1220. by Daniel G. Gibson, Gwynedd A. Benders, Cynthia Andrews-Pfannkoch, et al.Evgeniya A. Denisova, Holly Baden-Tillson, Jayshree Zaveri, Timothy B. Stockwell, Anushka Brownley, David W. Thomas, Mikkel A. Algire, Chuck Merryman, Lei Young, Vladimir N. Noskov, John I. Glass, J. Craig Venter, Clyde A. Hutchison, Hamilton O. Smith posted to synthetic_dna synthetic_biology by dbikard on 2009-09-22 10:53:57 as along with 16 people and 1 group abhishek_tiwari viren4388 nzm Scis0000002 antonkratz druvus austin balicea operon neveaire grahamc zwang GeeSharpMinor lisa1 renatomilani kevinchannon Synthetic Biology
	A synthetic oscillatory network of transcriptional regulators [My Copy] Nature, Vol. 403, No. 6767. (20 January 2000), pp. 335-338. by Michael B. Elowitz, Stanislas Leibler posted to gene_expression synthetic_biology by dbikard on 2009-09-21 09:41:53 as along with 23 people and 1 group joseph_x_zhou balabu stharward dannya222 abhishek_tiwari adamnellis sjayanthi jasonpark1 cjryan ClaireFB mattions rklancer dgront sharatjv mhucka margaritis Grobi msuarezdiez tvdbulck austin jjray dagmar Borelli BP205
	Bacteria as computers making computers [My Copy] FEMS Microbiology Reviews, Vol. 33, No. 1. (January 2009), pp. 3-26. by Antoine Danchin posted to synthetic_biology molecular_biology epistemology by dbikard on 2009-09-11 11:27:30 as along with 6 people and 1 group MurphysLab bertelsen marcio druvus Borelli jjray Synthetic Biology
	American Chemical Society fall meeting, 16-20 August, Washington, D.C. Altered microbes make dark-horse biofuels. [My Copy] Science (New York, N.Y.), Vol. 325, No. 5945. (4 September 2009), 1201. by Robert F. Service posted to synthetic_biology biofuel by dbikard on 2009-09-07 12:23:15 as along with 3 people Winzer cambray chriswillmott
	On schemes of combinatorial transcription logic [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 100, No. 9. (29 April 2003), pp. 5136-5141. by Nicolas E. Buchler, Ulrich Gerland, Terence Hwa posted to gene_expression transcription synthetic_biology logic by dbikard on 2009-08-27 12:40:02 as along with 6 people and 1 group akraemer jjray siebert balajis olympos discreteonyxorb Synthetic Biology
	Refinement and standardization of synthetic biological parts and devices [My Copy] Nat Biotech, Vol. 26, No. 7. (July 2008), pp. 787-793. by Barry Canton, Anna Labno, Drew Endy posted to synthetic_biology by dbikard on 2009-08-17 16:32:47 as along with 6 people Vincent_Rouilly gvillar guhjy marck austin grahamc
	Synthetic protein scaffolds provide modular control over metabolic flux [My Copy] Nature Biotechnology, Vol. 27, No. 8. (02 August 2009), pp. 753-759. by John E. Dueber, Gabriel C. Wu, G. Reza Malmirchegini, et al.Tae S. Moon, Christopher J. Petzold, Adeeti V. Ullal, Kristala L. J. Prather, Jay D. Keasling posted to synthetic_biology metabolic_engineering by dbikard on 2009-08-17 16:20:52 as along with 6 people abhishek_tiwari grahamc phoenixzxl kevinchannon biomcgary jdoconnell
	A new revolution? The place of systems biology and synthetic biology in the history of biology. [My Copy] EMBO reports, Vol. 10 Suppl 1 (August 2009) by Michel Morange posted to systems_biology synthetic_biology epistemology by dbikard on 2009-08-17 15:36:22 as along with 3 people jjray allysonlister sjcockell
	Circular Polymerase Extension Cloning of Complex Gene Libraries and Pathways [My Copy] PLoS ONE, Vol. 4, No. 7. (30 July 2009), e6441. by Jiayuan Quan, Jingdong Tian posted to cloning synthetic_biology by dbikard on 2009-08-05 11:34:09 as along with 1 person Vincent_Rouilly
	An externally tunable bacterial band-pass filter. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 106, No. 25. (23 June 2009), pp. 10135-10140. by T. Sohka, R. A. Heins, R. M. Phelan, J. M. Greisler, C. A. Townsend, M. Ostermeier posted to gene_expression networks synthetic_biology by dbikard on 2009-07-31 13:08:56 as along with 4 people jjray Vincent_Rouilly austin adampah
	A Synthetic Genetic Edge Detection Program [My Copy] Cell, Vol. 137, No. 7. (26 June 2009), pp. 1272-1281. by Jeffrey J. Tabor, Howard M. Salis, Zachary B. Simpson, et al.Aaron A. Chevalier, Anselm Levskaya, Edward M. Marcotte, Christopher A. Voigt, Andrew D. Ellington posted to synthetic_biology by dbikard on 2009-07-31 12:51:54 as along with 2 people and 1 group pablocarb austin Synthetic Biology
	Programming cells by multiplex genome engineering and accelerated evolution [My Copy] Nature, Vol. 460, No. 7257. (26 July 2009), pp. 894-898. by Harris H. Wang, Farren J. Isaacs, Peter A. Carr, et al.Zachary Z. Sun, George Xu, Craig R. Forest, George M. Church posted to evolution genome mutagenesis synthetic_biology by dbikard on 2009-07-30 14:34:58 as along with 13 people and 2 groups abhishek_tiwari TorstenWaldminghaus jdoconnell dswan Annab badi druvus dayjm pkonings zwang phoenixzxl biomcgary djkt Journal picks Synthetic Biology
	Ultrasensitivity and noise propagation in a synthetic transcriptional cascade [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 102, No. 10. (8 March 2005), pp. 3581-3586. by Sara Hooshangi, Stephan Thiberge, Ron Weiss posted to gene_expression synthetic_biology by dbikard on 2009-07-24 16:16:11 as along with 6 people ClaireFB rklancer JKelly555 madhadron johncumbers melting
	Reassigning cysteine in the genetic code of Escherichia coli. [My Copy] Genetics, Vol. 150, No. 2. (October 1998), pp. 543-551. by V. Döring, P. Marlière posted to escherichia_coli genetic_code synthetic_biology by dbikard on 2009-06-04 10:42:34 as
	Replication of hexitol oligonucleotides as a prelude to the propagation of a third type of nucleic acid in vivo. [My Copy] Comptes rendus biologies, Vol. 326, No. 12. (December 2003), pp. 1175-1184. by S. Pochet, P. A. Kaminski, A. Van Aerschot, P. Herdewijn, P. Marlière posted to dna synthetic_biology xna by dbikard on 2009-06-04 10:34:04 as
	Enlarging the Amino Acid Set of Escherichia coli by Infiltration of the Valine Coding Pathway [My Copy] Science, Vol. 292, No. 5516. (20 April 2001), pp. 501-504. by Volker Doring, Henning D. Mootz, Leslie A. Nangle, et al.Tamara L. Hendrickson, Valerie de Crecy-Lagard, Paul Schimmel, Philippe Marliere posted to escherichia_coli genetic_code synthetic_biology trna by dbikard on 2009-06-04 10:30:37 as along with 2 people lauresultan kirasato
	Diversity-based, model-guided construction of synthetic gene networks with predicted functions [My Copy] Nat Biotech, Vol. 27, No. 5. (19 May 2009), pp. 465-471. by Tom Ellis, Xiao Wang, James J. Collins posted to networks synthetic_biology by dbikard on 2009-05-19 10:17:27 as along with 7 people boko4ikameto druvus jvb jbhiatt balabu hryk dswan
	Engineered bacteriophage targeting gene networks as adjuvants for antibiotic therapy. [My Copy] Proceedings of the National Academy of Sciences of the United States of America (2 March 2009) by Timothy K K. Lu, James J J. Collins posted to phage synthetic_biology therapy by dbikard on 2009-03-05 08:30:36 as along with 1 person and 1 group knowlengr SynBioSys
	The death of molecular biology? [My Copy] History and philosophy of the life sciences, Vol. 30, No. 1. (2008), pp. 31-42. by M. Morange posted to epistemology synthetic_biology by dbikard on 2009-02-12 08:50:48 as along with 1 person CBORIA
	Amplification of the tryptophan operon gene in Escherichia coli chromosome to increase l-tryptophan biosynthesis [My Copy] Applied Microbiology and Biotechnology, Vol. 40, No. 2. (1 November 1993), pp. 301-305. by Err-Cheng Chan, Hsiu-Lan Tsai, Shih-Lin Chen, Due-Gang Mou posted to synthetic_biology tryptophan by dbikard on 2009-01-20 10:38:58 as along with 1 person jjray
	DNA assembler, an in vivo genetic method for rapid construction of biochemical pathways. [My Copy] Nucleic acids research, Vol. 37, No. 2. (12 February 2009), gkn991. by Z. Shao, H. Zhao, H. Zhao posted to metabolic_engineering synthetic_biology by dbikard on 2009-01-12 16:11:20 as along with 7 people and 1 group guhjy mtruksa austin Vincent_Rouilly renatomilani skoch3 dullhunk Koch_Lab
	Ketosynthases in the initiation and elongation modules of aromatic polyketide synthases have orthogonal acyl carrier protein specificity. [My Copy] Biochemistry, Vol. 42, No. 21. (3 June 2003), pp. 6588-6595. by Y. Tang, T. S. Lee, S. Kobayashi, C. Khosla posted to escherichia_coli polyketide synthetic_biology by dbikard on 2008-12-16 16:01:03 as
	A fast, robust and tunable synthetic gene oscillator. [My Copy] Nature (29 October 2008) by Jesse Stricker, Scott Cookson, Matthew R R. Bennett, William H H. Mather, Lev S S. Tsimring, Jeff Hasty posted to oscillations synthetic_biology by dbikard on 2008-11-01 15:56:40 as along with 12 people and 3 groups sbottani jasonpark1 austin margaritis lflorez stasaki stringertheory allysonlister joseph_x_zhou yxue jbhiatt grahamc BP205 bioNetwork_sysBio SynBioSys
	Synthetic biology--putting engineering into biology [My Copy] Bioinformatics, Vol. 22, No. 22. (15 November 2006), pp. 2790-2799. by Matthias Heinemann, Sven Panke posted to synthetic_biology by dbikard on 2008-09-28 15:52:28 as along with 9 people and 3 groups druvus tomhebbron Synthetic_Biology_Literature aalibes marcius jtaylor Freecat fishtank karfunkel SynBioSys BioinfoCIPF SGU-CIPF
	Synthetic biology: discovering new worlds and new words. The new and not so new aspects of this emerging research field [My Copy] EMBO Reports, Vol. aop, No. current. (22 August 2008) by Victor de Lorenzo, Antoine Danchin posted to synthetic_biology by dbikard on 2008-09-05 14:58:19 as along with 2 people and 1 group treangen cambray SynBioSys
	Robust, Tunable Biological Oscillations from Interlinked Positive and Negative Feedback Loops [My Copy] Science, Vol. 321, No. 5885. (4 July 2008), pp. 126-129. by Tony Y. Tsai, Yoon S. Choi, Wenzhe Ma, Joseph R. Pomerening, Chao Tang, James E. Ferrell posted to networks oscillations synthetic_biology by dbikard on 2008-07-17 11:17:58 as along with 11 people and 3 groups balabu jjray jasonpark1 t_richardson agonzale margaritis madhadron Borelli kentsis caseybrown stringertheory Synthetic Biology BP205 SynBioSys
	Setting the standard in synthetic biology [My Copy] Nat Biotech, Vol. 26, No. 7. (July 2008), pp. 771-774. by Adam Arkin posted to synthetic_biology by dbikard on 2008-07-11 09:49:43 as along with 9 people abhishek_tiwari Scis0000002 fgibson TobiasAbenius Vincent_Rouilly guhjy marck grahamc austin
	Redesigning enzymes based on adaptive evolution for optimal function in synthetic metabolic pathways. [My Copy] Chemistry & biology, Vol. 15, No. 6. (June 2008), pp. 607-618. by Y. Yoshikuni, J. A. Dietrich, F. F. Nowroozi, P. C. Babbitt, J. D. Keasling posted to metabolic_engineering synthetic_biology by dbikard on 2008-06-20 10:52:24 as along with 1 person and 1 group grahamc SynBioSys
	Implementing arithmetic and other analytic operations by transcriptional regulation. [My Copy] PLoS computational biology, Vol. 4, No. 4. (April 2008) by S. M. Cory, T. J. Perkins posted to computational_biology synthetic_biology by dbikard on 2008-06-04 18:45:50 as along with 6 people and 1 group balabu bayesian jjray eskay maximilianh dquest SynBioSys
	Rational design of memory in eukaryotic cells. [My Copy] Genes Dev, Vol. 21, No. 18. (15 September 2007), pp. 2271-2276. by C. M. Ajo-Franklin, D. A. Drubin, J. A. Eskin, et al.E. P. Gee, D. Landgraf, I. Phillips, P. A. Silver posted to synthetic_biology by dbikard on 2008-06-02 10:20:01 as along with 4 people and 1 group austin cjeans balabu grahamc SynBioSys
	Designing biological systems. [My Copy] Genes Dev, Vol. 21, No. 3. (1 February 2007), pp. 242-254. by D. A. Drubin, J. C. Way, P. A. Silver posted to synthetic_biology by dbikard on 2008-06-02 10:18:29 as along with 7 people and 1 group Antoine_Decrulle Scis0000002 druvus tmmurali hslee snowcrash grahamc SynBioSys
	Enhancement of Cell Type Specificity by Quantitative Modulation of a Chimeric Ligand [My Copy] J. Biol. Chem., Vol. 283, No. 13. (28 March 2008), pp. 8469-8476. by Pablo Cironi, Ian A. Swinburne, Pamela A. Silver posted to synthetic_biology by dbikard on 2008-06-02 10:17:03 as
	Defossiling Fuel: How Synthetic Biology Can Transform Biofuel Production [My Copy] ACS Chem. Biol., Vol. 3, No. 1. (18 January 2008), pp. 13-16. by David Savage, F., Jeffrey Way, Pamela A. Silver posted to synthetic_biology by dbikard on 2008-06-02 10:15:22 as along with 4 people and 1 group SciNika austin cambray grahamc SynBioSys
	Foundations for engineering biology [My Copy] Nature, Vol. 438, No. 7067., pp. 449-453. by Drew Endy posted to synthetic_biology by dbikard on 2008-05-30 13:55:20 as along with 14 people and 1 group Vincent_Rouilly antonkratz gvillar jec105 ClaireFB monod jmeppley eweaver perrywoo johncumbers pirapira kevinchannon austin grahamc SynBioSys
	Design of artificial cell-cell communication using gene and metabolic networks. [My Copy] Proc Natl Acad Sci U S A, Vol. 101, No. 8. (24 February 2004), pp. 2299-2304. by T. Bulter, S. G. Lee, W. W. Wong, E. Fung, M. R. Connor, J. C. Liao posted to communication synthetic_biology by dbikard on 2008-05-29 15:19:33 as along with 3 people and 2 groups jec105 camster rklancer dbk-lab SynBioSys
	Customized signaling with reconfigurable protein scaffolds [My Copy] Nature Biotechnology, Vol. 26, No. 5., pp. 526-528. by Patrick Guye, Ron Weiss posted to synthetic_biology by dbikard on 2008-05-29 14:13:25 as along with 1 person and 1 group grahamc SynBioSys
	[The importance of synthetic biology.] [My Copy] Medecine sciences : M/S, Vol. 24, No. 5. (May 2008), pp. 447-448. by M Morange posted to synthetic_biology by dbikard on 2008-05-13 09:16:07 as
	[First French team success during iGEM Synthetic biology competition.] [My Copy] Medecine sciences : M/S, Vol. 24, No. 5. (May 2008), pp. 541-544. by David Bikard, François Képès, posted to synthetic_biology by dbikard on 2008-05-13 09:15:35 as

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synthetic_biology	103
evolution	71
replication	55
single_strand	49
hairpin	47
cooperation	40
gene_expression	39
integrons	32
recombination	31
escherichia_coli	30
cruciform	30
phage	26
dna_coiling	25
bacteria	23
noise	22
plasmid	22
promoter	21
dna_folding	17
transcription	16
chromosome	14
conjugation	13
pria	12
networks	12
protein	11
mutagenesis	11
transposon	10
genetic_circuits	10
rolling-circle	10
antibiotics	9
vibrio	9
hk022	8
systems_biology	8
rna	7
dnaa	7
lambda	7
in_vivo	6
metabolic_engineering	6
resistance	6
dna	6
kin-selection	6
horizontal_gene_transfer	6
directed_evolution	5
genetic_code	5
computational_biology	5
tryptophan	5
genome	5
primases	5
regulation	4
relaxases	4
bgp	4
eucaryotes	4
switch	3
polyketide	3
science	3
plasticity	3
heat_shock	3
dnag	3
review	3
oscillations	3
dna_repair	3
methods	3
toxinantitoxin	3
sos	3
integrase	3
linker	3
epistemology	3
protein_design	3
xna	3
gene_shuffling	3
subtilis	3
evolvability	3
protein_structure	2
differentiation	2
flagella	2
pathogen	2
phylogeny	2
gene_networks	2
segregation	2
virus	2
persistence	2
book	2
single_cell	2
lactose_operon	2
feedback	2
synthetic_dna	2
physics	2
integron	2
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biofuel	2
fusion_protein	2
transduction	2
cloning	2
population	2
microscopy	2
music	2
ppgpp	1
promoters	1
statistics	1
counterselection	1
dnab	1
computer	1
light	1
stress	1
aa	1
serratia	1
shape	1
development	1
operon	1
replicators	1
energy	1
cassettes	1
duplication	1
trna	1
division	1
cytoskeleton	1
protozoan	1
translation	1
permeases	1
a_thaliana	1
lipids	1
therapy	1
brain_plasticity	1
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cholerae	1
robot	1
bacillus_subtilis	1
terpenoids	1
cell_cycle	1
group-selection	1
time_lapse	1
osmotic_pressure	1
degradation	1
humans	1
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microfluidics	1
protein_domain	1
ribosome_binding_site	1
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kin	1
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mutations	1
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species	1
bet_hedging	1
amoeba	1
algae	1
memory	1

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