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	Three-dimensional cluster analysis identifies interfaces and functional residue clusters in proteins. [My Copy] J Mol Biol, Vol. 307, No. 5. (13 April 2001), pp. 1487-1502. by R. Landgraf, I. Xenarios, D. Eisenberg posted to window_contact seq_interface docking by dfdong on 2009-11-28 02:31:06 as along with 8 people and 2 groups ramiro2k barry pansapiens sriram_s cjeans mingzhi Pao-Yang marti structural_bioinformatics Bioinformatics
	Statistical analysis and prediction of protein-protein interfaces [My Copy] Proteins: Structure, Function, and Bioinformatics, Vol. 60, No. 3. (19 May 2005), pp. 353-366. by Andrew J. Bordner, Ruben Abagyan posted to predict patch docking complex by dfdong on 2009-11-28 02:24:30 as along with 8 people and 2 groups boris_aguilar barry bicko lyongu ameetsoni cjeans Evangelia marti structural_bioinformatics Bioinformatics
	Identifying protein–protein interaction sites in transient complexes with temperature factor, sequence profile and accessible surface area [My Copy] Amino Acids by Rong Liu, Wenchao Jiang, Yanhong Zhou posted to docking by dfdong on 2009-11-23 08:56:27 as along with 1 person higueruelo
	Common physical basis of macromolecule-binding sites in proteins [My Copy] Nucl. Acids Res. (6 November 2008), gkn868. by Yao C. Chen, Carmay Lim posted to docking by dfdong on 2009-11-23 08:49:53 as along with 4 people zwang lptolik reyez markchen
	Combining interface core and whole interface descriptors in postscan processing of protein-protein docking models [My Copy] Proteins: Structure, Function, and Bioinformatics, Vol. 77, No. 2. (2009), NA. by Noga Kowalsman, Miriam Eisenstein posted to docking by dfdong on 2009-11-23 08:43:14 as
	Neutral evolution on mammalian protein surfaces [My Copy] Trends in Genetics, Vol. 25, No. 9. (26 September 2009), pp. 377-381. by Gavin C. Conant posted to evolution docking by dfdong on 2009-11-23 08:40:36 as along with 1 person biomcgary
	Quaternary Structure Constraints on Evolutionary Sequence Divergence [My Copy] Mol Biol Evol, Vol. 24, No. 2. (1 February 2007), pp. 349-351. by Maria S. Fornasari, Gustavo Parisi, Julian Echave posted to structure_evolution evolution docking by dfdong on 2009-11-23 08:40:12 as along with 2 people zwang Garamonfok
	Protein docking using surface matching and supervised machine learning [My Copy] Proteins: Structure, Function, and Bioinformatics, Vol. 68, No. 2. (1 August 2007), pp. 488-502. by Andrew J. Bordner, Andrey A. Gorin posted to docking by dfdong on 2009-11-23 08:37:51 as along with 2 people and 1 group whitead bicko Jiang Research Group
	Architectures and Functional Coverage of Protein–Protein Interfaces [My Copy] Journal of Molecular Biology, Vol. 381, No. 3. (05 September 2008), pp. 785-802. by Nurcan Tuncbag, Attila Gursoy, Emre Guney, Ruth Nussinov, Ozlem Keskin posted to docking by dfdong on 2009-11-23 08:37:40 as along with 2 people daforerog marti
	Protein binding site prediction using an empirical scoring function [My Copy] Nucl. Acids Res., Vol. 34, No. 13. (7 August 2006), pp. 3698-3707. by Shide Liang, Chi Zhang, Song Liu, Yaoqi Zhou posted to seq_interface predict docking by dfdong on 2009-11-23 08:33:29 as along with 4 people iaolier bicko emidio_capriotti marti
	Structure, function, and evolution of transient and obligate proteinâprotein interactions [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 102, No. 31. (2 August 2005), pp. 10930-10935. by Julian Mintseris, Zhiping Weng posted to docking complex coevolution coevoluion_interface by dfdong on 2009-11-23 08:11:28 as along with 12 people and 3 groups timg mgomes barry bjorns wiehe julianm bicko chad_davis cjeans Evangelia marti higueruelo structural_bioinformatics ZLAB Bioinformatics
	ISIS: interaction sites identified from sequence. [My Copy] Bioinformatics (Oxford, England), Vol. 23, No. 2. (15 January 2007), pp. e13-16. by Yanay Ofran, Burkhard Rost posted to predict docking coevolution by dfdong on 2009-11-04 03:23:25 as along with 2 people bicko qluo
	Prediction of interface residues in protein-protein complexes by a consensus neural network method: test against NMR data. [My Copy] Proteins. , Vol. 61, No. 1. (1 October 2005), pp. 21-35. by H. Chen, H. X. Zhou posted to predict ml docking complex coevolution by dfdong on 2009-11-04 03:23:02 as along with 2 people qluo karbak
	Insights into Protein–Protein Interfaces using a Bayesian Network Prediction Method [My Copy] Journal of Molecular Biology, Vol. 362, No. 2. (15 September 2006), pp. 365-386. by James R. Bradford, Chris J. Needham, Andrew J. Bulpitt, David R. Westhead posted to predict docking complex by dfdong on 2009-11-03 15:05:10 as along with 8 people and 2 groups barry conkymacro ameetsoni grahamc massivemayhem phoenixzxl marti paolomarcatili structural_bioinformatics Bioinformatics
	Interaction-site prediction for protein complexes: a critical assessment [My Copy] Bioinformatics, Vol. 23, No. 17. (1 September 2007), pp. 2203-2209. by Huan-Xiang Zhou, Sanbo Qin posted to predict docking complex by dfdong on 2009-11-03 15:03:56 as along with 14 people jinghu_fandm flbarroso timg phoenixzxl tjimenez bicko malcook zwang cabbagezs niallhaslam carlescorbi marti higueruelo kintoki
	Accurate Prediction of Peptide Binding Sites on Protein Surfaces [My Copy] PLoS Comput Biol, Vol. 5, No. 3. (27 March 2009), e1000335. by Evangelia Petsalaki, Alexander Stark, Eduardo García-Urdiales, Robert B. Russell posted to predict docking complex by dfdong on 2009-11-03 15:02:34 as along with 8 people and 1 group higueruelo pablocarb nickolay phoenixzxl neils idoerg sobolevnrm paulschlesinger baker-group
	Identification of computational hot spots in protein interfaces: combining solvent accessibility and inter-residue potentials improves the accuracy [My Copy] Bioinformatics, Vol. 25, No. 12. (15 June 2009), pp. 1513-1520. by Nurcan Tuncbag, Attila Gursoy, Ozlem Keskin posted to predict docking complex by dfdong on 2009-11-03 15:02:04 as along with 6 people and 1 group okapi ubcg08l marti apaydin kshameer phoenixzxl structural_bioinformatics
	A Tool for calculating binding-site residues on proteins from PDB Structures [My Copy] BMC Structural Biology, Vol. 9, No. 1. (2009), 52. by Jing Hu, Changhui Yan posted to docking complex by dfdong on 2009-11-03 15:00:56 as along with 3 people balewis peteruetz phoenixzxl
	The interwinding nature of protein-protein interfaces and its implication for protein complex formation [My Copy] Bioinformatics In Bioinformatics, Vol. 25, No. 23. (1 December 2009), pp. 3108-3113. by Kei Yura, Steven Hayward posted to docking complex by dfdong on 2009-11-03 15:00:25 as along with 5 people and 1 group jperkins kshameer higueruelo tprpip phoenixzxl Orengo Group Journal Picks
	Prediction of protein-protein interaction sites using patch analysis. [My Copy] Journal of molecular biology, Vol. 272, No. 1. (12 September 1997), pp. 133-143. by S. Jones, J. M. Thornton posted to patch docking by dfdong on 2009-11-03 02:18:26 as along with 4 people mgomes cjeans marti bicko
	Principles of protein-protein interactions [My Copy] Proceedings of the National Academy of Sciences of the United States of America In Proceedings of the National Academy of Sciences of the United States of America, Vol. 93, No. 1. (9 January 1996), pp. 13-20. by S. Jones, J. M. Thornton posted to docking complex analysis by dfdong on 2009-11-02 06:56:46 as along with 8 people mgomes sergiun joseolucha boris_aguilar bicko chad_davis Evangelia iris_2001
	Coevolution at protein complex interfaces can be detected by the complementarity trace with important impact for predictive docking [My Copy] Proceedings of the National Academy of Sciences, Vol. 105, No. 22. (3 June 2008), pp. 7708-7713. by Hocine Madaoui, RaphaÃ«l Guerois posted to docking complex coevolution by dfdong on 2009-11-02 06:46:19 as along with 8 people qluo robfsouza RebeccaHamer orr cabbagesofdoom phoenixzxl bicko zwang

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dfdong's docking [22 articles] Export Sort

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