ALINE: a WYSIWYG protein-sequence alignment editor for publication-quality alignments Export

@article{citeulike:4362832, abstract = {Marked-up sequence alignments typically provide the central figure in articles describing proteins, whether in the fields of biochemistry, bioinformatics or structural biology. The generation of these figures is often unwieldy: interactive programs are often aesthetically limited and the use of batch programs requires the repetitive iterative editing of scripts. ALINE is a portable interactive graphical sequence-alignment editor implemented in Perl/Tk which produces publication-quality sequence-alignment figures where "what you see is what you get". ALINE is freely available for download from http://crystal.bcs.uwa.edu.au/px/charlie/software/aline/.}, author = {Bond, Charles S. and Sch{\"{u}}ttelkopf, Alexander W.}, citeulike-article-id = {4362832}, citeulike-linkout-0 = {http://dx.doi.org/10.1107/S0907444909007835}, citeulike-linkout-1 = {http://scripts.iucr.org/cgi-bin/paper?S0907444909007835}, citeulike-linkout-2 = {http://view.ncbi.nlm.nih.gov/pubmed/19390156}, citeulike-linkout-3 = {http://www.hubmed.org/display.cgi?uids=19390156}, doi = {10.1107/S0907444909007835}, issn = {1399-0047}, journal = {Acta Crystallographica Section D}, keywords = {alignment, annotation, sequence, software}, month = {May}, number = {5}, pages = {510--512}, posted-at = {2009-06-24 20:32:45}, priority = {2}, publisher = {International Union of Crystallography}, title = {{{\it ALINE}: a WYSIWYG protein-sequence alignment editor for publication-quality alignments}}, url = {http://dx.doi.org/10.1107/S0907444909007835}, volume = {65}, year = {2009} }

TY - JOUR ID - citeulike:4362832 L3 - citeulike-article-id:4362832 N2 - Marked-up sequence alignments typically provide the central figure in articles describing proteins, whether in the fields of biochemistry, bioinformatics or structural biology. The generation of these figures is often unwieldy: interactive programs are often aesthetically limited and the use of batch programs requires the repetitive iterative editing of scripts. ALINE is a portable interactive graphical sequence-alignment editor implemented in Perl/Tk which produces publication-quality sequence-alignment figures where "what you see is what you get". ALINE is freely available for download from http://crystal.bcs.uwa.edu.au/px/charlie/software/aline/. IS - 5 JF - Acta Crystallographica Section D SN - 1399-0047 EP - 512 TI - {{\it ALINE}: a WYSIWYG protein-sequence alignment editor for publication-quality alignments} PB - International Union of Crystallography VL - 65 SP - 510 KW - alignment KW - annotation KW - sequence KW - software AU - Bond, Charles AU - Sch{ü}ttelkopf, Alexander PY - 2009/May// UR - http://dx.doi.org/10.1107/S0907444909007835 ER -