dimka's conformation [21 articles] Export

Recent papers added to dimka's library classified by the tag conformation. You can also see everyone's conformation.

	Elucidating Molecular Overlays from Pairwise Alignments Using a Genetic Algorithm [My Copy] Journal of Chemical Information and Modeling, Vol. 49, No. 7. (27 July 2009), pp. 1847-1855. by Gareth Jones, Yinghong Gao, Carleton R. Sage posted to smallmol conformation bioactive by dimka on 2009-10-20 16:41:40 as along with 2 people reyez ima
	Estimation of the pore size of the large-conductance mechanosensitive ion channel of Escherichia coli. [My Copy] Biophysical journal, Vol. 73, No. 4. (October 1997), pp. 1925-1931. by C. C. Cruickshank, R. F. Minchin, A. C. Le Dain, B. Martinac posted to pore open-closed helix conformation by dimka on 2009-10-19 05:30:49 as
	IsoStar: A library of information about nonbonded interactions [My Copy] Journal of Computer-Aided Molecular Design, Vol. 11, No. 6. (1 November 1997), pp. 525-537. by Ian J. Bruno, Jason C. Cole, Jos P. M. Lommerse, R. Scott Rowland, Robin Taylor, Marcel L. Verdonk posted to program non-bonded ligand library isostar interaction conformation by dimka on 2009-10-13 17:22:43 as
	Assessing the performance of OMEGA with respect to retrieving bioactive conformations. [My Copy] Journal of molecular graphics & modelling, Vol. 21, No. 5. (March 2003), pp. 449-462. by Jonas Boström, Jeremy R. Greenwood, Johan Gottfries posted to methods ligand conformation by dimka on 2009-10-06 16:30:36 as
	Small Molecule Conformational Preferences Derived from Crystal Structure Data. A Medicinal Chemistry Focused Analysis [My Copy] Journal of Chemical Information and Modeling, Vol. 48, No. 1. (1 January 2008), pp. 1-24. by Ken A. Brameld, Bernd Kuhn, Deborah C. Reuter, Martin Stahl posted to smallmol pdb conformation ccdc by dimka on 2009-08-20 18:19:49 as along with 2 people pslee daevans
	Direct Visualization of KirBac3.1 Potassium Channel Gating by Atomic Force Microscopy. [My Copy] J Mol Biol (20 September 2007) by Szymon Jarosławski, Brittany Zadek, Frances Ashcroft, Catherine Vénien-Bryan, Simon Scheuring posted to afm conformation kirbac31 by dimka on 2007-10-16 17:45:21 as
	MAMMOTH (matching molecular models obtained from theory): an automated method for model comparison. [My Copy] Protein science : a publication of the Protein Society, Vol. 11, No. 11. (1 November 2002), pp. 2606-2621. by Angel R. Ortiz, Charlie E. Strauss, Osvaldo Olmea posted to algorithm alignment conformation databases folding mammoth models molecular protein secondary simulation software statistics structure by dimka on 2006-03-28 23:52:07 as along with 8 people and 2 groups tomjad awarlau ana iakes jwm analogAI sebk tjimenez structural_bioinformatics Bioinformatics
	One channel: open and closed. [My Copy] Structure (Camb), Vol. 13, No. 10. (October 2005), pp. 1398-1400. by J. L. Robertson, B. Roux posted to close conformation cryomicroscopy electron kirbac31 open by dimka on 2005-10-23 23:03:55 as
	Two Different Conformational States of the KirBac3.1 Potassium Channel Revealed by Electron Crystallography. [My Copy] Structure (Camb), Vol. 13, No. 10. (October 2005), pp. 1463-1472. by A. Kuo, C. Domene, L. N. Johnson, D. A. Doyle, C. Vénien-Bryan posted to conformation kirbac31 modeling states by dimka on 2005-10-23 23:02:04 as along with 1 person jenni_p
	Localization of PIP2 activation gate in inward rectifier K+ channels [My Copy] Nature neuroscience, Vol. 6, No. 8. (2003), pp. 811-818. by J. Xiao, X. G. Zhen, J. Yang posted to amp cadmium conformation cysteine derivatives ethyl gating inhibitor irk1 kir21 mesylates mutation pip2 silver by dimka on 2005-06-06 17:48:06 as
	Specificity determinants in phosphoinositide dephosphorylation: crystal structure of an archetypal inositol polyphosphate 5-phosphatase [My Copy] Cell, Vol. 105, No. 3. (2001), pp. 379-389. by Y. Tsujishita, S. Guo, L. E. Stolz, J. D. York, J. H. Hurley posted to phosphorylation protein quaternary recombinant specificity structure substrate alignment binding calcium catalytic cloning conformation crystallography domain enzyme folding humans hydrolase inhibitor inositol models molecular monoester mutation nerve phosphate phosphoric by dimka on 2005-06-06 17:48:05 as
	Polyamines as gating molecules of inward-rectifier K+ channels [My Copy] European journal of biochemistry / FEBS, Vol. 267, No. 19. (2000), pp. 5824-5829. by D. Oliver, T. Baukrowitz, B. Fakler posted to classification conformation gating ion kir membrane polyamines by dimka on 2005-06-06 17:48:02 as
	Effects of charged amino acid mutations on the bimolecular kinetics of reduction of yeast iso-1-ferricytochrome c by bovine ferrocytochrome b5 [My Copy] Biochemistry (John Wiley & Sons), Vol. 32, No. 26. (1993), pp. 6613-6623. by S. H. Northrup, K. A. Thomasson, C. M. Miller, et al.P. D. Barker, L. D. Eltis, J. G. Guillemette, S. C. Inglis, A. G. Mauk posted to amp analog b5 binding comparative conformation cytochrome derivatives heme histidine kinetics lysine mutagenesis oxidation-reduction protein sequence by dimka on 2005-06-06 17:48:02 as
	Electrostatic effects in proteins [My Copy] Annual Review of Biophysics and Biophysical Chemistry, Vol. 14 (1985), pp. 387-417. by J. B. Matthew posted to concentration conformation diffraction humans hydrogen-ion kinetics magnetic mathematics peptide protein resonance solvents spectroscopy by dimka on 2005-06-06 17:47:57 as
	Molecular dynamics study of a gelsolin-derived peptide binding to a lipid bilayer containing phosphatidylinositol 4,5-bisphosphate [My Copy] Biopolymers, Vol. 71, No. 1. (2003), pp. 49-70. by I. Liepina, C. Czaplewski, P. Janmey, A. Liwo posted to conformation dimyristoyl gelsolin lipd models molecular pc peptide phosphatidylcholine phosphatidylinositol pi pip2 simulation by dimka on 2005-06-06 17:47:54 as
	Signal-dependent membrane targeting by pleckstrin homology (PH) domains [My Copy] The Biochemical journal, Vol. 350 (2000), pp. 1-18. by M. A. Lemmon, K. M. Ferguson posted to blood conformation homology phosphatidylinositol phosphoprotein pip2 by dimka on 2005-06-06 17:47:54 as
	Structural basis of the membrane-targeting and unmasking mechanisms of the radixin FERM domain [My Copy] The EMBO journal, Vol. 19, No. 17. (2000), pp. 4449-4462. by K. Hamada, T. Shimizu, T. Matsui, S. Tsukita, T. Hakoshima posted to blood conformation crystallography cytoskeleton homology inositol membrane models molecular protein sequence by dimka on 2005-06-06 17:47:49 as
	Simultaneous binding of PtdIns(4,5)P2 and clathrin by AP180 in the nucleation of clathrin lattices on membranes [My Copy] Science, Vol. 291, No. 5506. (2001), pp. 1051-1055. by M. G. Ford, B. M. Pearse, M. K. Higgins, et al.Y. Vallis, D. J. Owen, A. Gibson, C. R. Hopkins, P. R. Evans, H. T. Mcmahon posted to adaptor assembly binding carrier cell-membrane cells cercopithecus clathrin coated complex conformation crystallography folding liposomes membrane molecular monomeric motifs nerve phosphatidylinositol phosphoprotein protein secondary sequence structure tertiary transport vesicle by dimka on 2005-06-06 17:47:47 as
	Brownian dynamics simulations of interaction between scorpion toxin Lq2 and potassium ion channel [My Copy] Biophysical journal, Vol. 80, No. 4. (2001), pp. 1659-1669. by M. Cui, J. Shen, J. M. Briggs, et al.X. Luo, X. Tan, H. Jiang, K. Chen, R. Ji posted to bonding channel conformation databases electrostatics factual homology hydrogen ligand models molecular potassium protein scorpion secondary sequence simulation sites spectroscopy structure venom by dimka on 2005-06-06 17:47:42 as
	Improved precision and efficiency of free energy calculations for small systems using lambda-scaled atomic masses and separating conformational and transformational sampling [My Copy] J.Comput.Chem., Vol. 24, No. 12. (2003), pp. 1383-1389. by P. Carlsson, L. Nilsson posted to conformation free-energy lambda sampling small transformation by dimka on 2005-06-06 17:47:39 as
	Orientation of the headgroup of phosphatidylinositol in a model biomembrane as determined by neutron diffraction [My Copy] Biochemistry (John Wiley & Sons), Vol. 38, No. 26. (1999), pp. 8393-8401. by J. P. Bradshaw, R. J. Bushby, C. C. Giles, M. R. Saunders posted to bilayer carbohydrate chemical conformation deuterium diffraction dimyristoyl distribution lipid models molecular neutrons normal phosphatidylcholine phosphatidylinositol temperature by dimka on 2005-06-06 17:47:39 as

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md	100
pip2	100
channel	85
structure	84
lipid	81
membrane	72
kir	61
protein	61
mmult-ref	60
gating	47
simulation	47
molecular	44
phosphatidylinositol	38
potassium	38
simulations	38
review	37
ph	34
ph-sensor	33
sequence	33
romk	29
ion	25
katp	24
alignment	22
bilayer	22
conformation	21
dppc	21
kir62	21
classification	20
kcsa	20
models	20
irk1	19
kir21	17
binding	15
electrostatics	15
inositol	15
mutation	15
peptide	14
amp	13
domain	12
inwardly	12
kir11	12
mutagenesis	12
adenosine	11
analysis	11
cholesterol	11
crystallography	11
electrophysiology	11
gtp-binding	11
tertiary	11
triphosphate	11
dmpc	10
free-energy	10
girk	10
g-protein	10
kinetics	10
multiple	10
charmm	9
conductivity	9
homology	9
humans	9
inhibitor	9
model	9
nmr	9
patch-clamp	9
pore	9
smallmol	9
structure-activity	9
thermodynamics	9
automatic	8
coarse-grain	8
fluorescence	8
girk1	8
headgroup	8
kir31	8
kir41	8
kirbac11	8
kv12	8
ligand	8
open-closed	8
phospholipase	8
phosphorylation	8
proteins	8
atp	7
calcium	7
deltag	7
force-field	7
gromacs	7
methods	7
pca	7
phosphate	7
protein-lipid	7
rats	7
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scop	7
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ach	6
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open	6
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phosphatidylcholine	6
phosphoinositides	6
popc	6
rectify	6
secondary	6
signal	6
sodium	6
software	6
specificity	6
voltage-gated	6
cations	5
cell	5
diffusion	5
enzyme	5
guanosine	5
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identification	5
ip3	5
kir34	5
lipid-area	5
md-analysis	5
mechanosensitive	5
membrane-protein	5
modeling	5
mscl	5
muscarinic	5
myocardium	5
namd	5
orientation	5
partition	5
polyamines	5
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techniques	5
tool	5
voltage	5
1-phosphatidylinositol	4
algorithm	4
bacterial	4
blocker	4
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concentration	4
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hydrogen-ion	4
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implicit	4
inhibition	4
inositiol	4
irk3	4
kir51	4
kirbac31	4
lipid-protein	4
modeller	4
montecarlo	4
pdb	4
phosphoprotein	4
pip3	4
pressure	4
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transport	4
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bartter	3
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book	3
brownian	3
charge	3
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cytosol	3
data	3
diffraction	3
dimyristoyl	3
docking	3
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electric	3
experimental	3
factor	3
fep	3
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function	3
gb	3
girk2	3
girk4	3
glycine	3
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growth	3
helix	3
implicit-membrane	3
isoenzyme	3
k-channel	3
kir2	3
kir3	3
kvap	3
lc-coa	3
lipid-order-parameter	3
macromolecular	3
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mcd	3
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mice	3
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oocyte	3
pb	3
pcm	3
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pi	3
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pkc	3
popg	3
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predict	3
program	3
protein-membrane	3
pull	3
rdf	3
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recording	3
rubidium	3
scd	3
shaker	3
smd	3
spectroscopy	3
statistics	3
syndrome	3
temperature	3
transfection	3
2d	2
5-o-3-thiotriphosphate	2
acetate	2
acetylcholine	2
ala	2
alcohol	2
allosteric	2
amino	2
andersen	2
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antibody	2
arachidonic	2
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arginine	2
assesment	2
atria	2
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bd	2
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camp	2
carrier	2
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cells	2
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cho	2
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epsin	2
esp	2
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fab	2
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ied	2
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kv11	2
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lie	2
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long	2
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lysine	2
m1	2
m2	2
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mc	2
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porin	2
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properties	2
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score	2
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simulaid	2
solvation	2
spectrometry	2
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stoichiometry	2
substitution	2
substrate	2
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surface	2
tea	2
tetradecanoylphorbol	2
theory	2
transcription	2
tree	2
trp	2
tutorial	2
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vesicle	2
visualization	2
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water	2
110-decanediamine	1
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2-naphthylamine	1
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3-ribose	1
45-bisphosphate	1
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chirality	1
chlesterol	1
chloride	1
circadian	1
circular_variance	1
clasification	1
cloning	1
close	1
coated	1

dimka's conformation [21 articles] Export

dimka's tags