dimka's lipid [81 articles] Export

Recent papers added to dimka's library classified by the tag lipid. You can also see everyone's lipid.

	Molecular dynamics simulation of a dipalmitoylphosphatidylcholine bilayer with NaCl. [My Copy] Biophysical journal, Vol. 84, No. 6. (1 June 2003), pp. 3743-3750. by Sagar A. Pandit, David Bostick, Max L. Berkowitz posted to lipid ion headgroup equilibration dppc by dimka on 2009-09-19 22:36:25 as along with 2 people softsimu robertvacha
	Molecular Dynamics Simulation Study of Correlated Motions in Phospholipid Bilayer Membranes [My Copy] The Journal of Physical Chemistry B, Vol. 113, No. 40. (8 October 2009), pp. 13229-13234. by Matthew Roark, Scott E. Feller posted to membrane md lipid diffusion_coefficients bilayer by dimka on 2009-09-17 19:11:29 as along with 2 people sobolevnrm agrossfield
	Experimental validation of molecular dynamics simulations of lipid bilayers: a new approach. [My Copy] Biophysical journal, Vol. 88, No. 2. (1 February 2005), pp. 805-817. by Ryan W. Benz, Francisco Castro-Román, Douglas J. Tobias, Stephen H. White posted to simulation lipid charmm27 charmm22 bilayer by dimka on 2009-09-16 21:09:13 as along with 2 people nbrayali softsimu
	All-atom empirical force field for nucleic acids: I. Parameter optimization based on small molecule and condensed phase macromolecular target data [My Copy] Journal of Computational Chemistry, Vol. 21, No. 2. (2000), pp. 86-104. by Nicolas Foloppe, Alexander D. Mackerell, Jr posted to charmm charmm27 force-field lipid md by dimka on 2009-07-27 20:26:34 as along with 3 people rpetrenko mkrishna easybakemuffin
	Molecular Dynamics Simulations of PIP2 and PIP3 in Lipid Bilayers: Determination of Ring Orientation, and the Effects of Surface Roughness on a Poisson-Boltzmann Description [My Copy] Biophysical Journal, Vol. 97, No. 1. (08 July 2009), pp. 155-163. by Zheng Li, Richard M. Venable, Laura A. Rogers, Diana Murray, Richard W. Pastor posted to bilayer lipid md pip2 pip3 simulation by dimka on 2009-07-08 21:33:21 as
	CHARMM-GUI Membrane Builder for Mixed Bilayers and Its Application to Yeast Membranes [My Copy] Vol. 97, No. 1. (8 July 2009), pp. 50-58. by Sunhwan Jo, Joseph B. Lim, Jeffery B. Klauda, Wonpil Im posted to bilayer build equilibration lipid by dimka on 2009-07-08 08:53:51 as
	Perturbations of membrane structure by cholesterol and cholesterol derivatives are determined by sterol orientation. [My Copy] Journal of the American Chemical Society, Vol. 131, No. 13. (8 April 2009), pp. 4854-4865. by Brett N. Olsen, Paul H. Schlesinger, Nathan A. Baker posted to cholesterol lipid md popc simulation by dimka on 2009-06-30 20:49:00 as along with 2 people and 1 group sunnytov sobolevnrm baker-group
	Molecular dynamics study of the effect of cholesterol on the properties of lipid monolayers at low surface tensions [My Copy] Phys. Chem. Chem. Phys., Vol. 11, No. 12. (2009), pp. 1916-1922. by Cameron Laing, Svetlana Baoukina, Peter D. Tieleman posted to cholesterol coarse-grain dopg dppc free-energy lipid simulaiton by dimka on 2009-05-15 19:52:13 as along with 3 people and 1 group patvarilly sobolevnrm flbarroso baker-group
	Absence of clustering of phosphatidylinositol-(4,5)-bisphosphate in fluid phosphatidylcholine [My Copy] J. Lipid Res., Vol. 47, No. 7. (1 July 2006), pp. 1521-1525. by Fabio Fernandes, Luis M. Loura, Alexander Fedorov, Manuel Prieto posted to inositiol lipid mixing pip2 sequesteration by dimka on 2009-04-17 19:51:31 as
	Lipid Models for United-Atom Molecular Dynamics Simulations of Proteins [My Copy] Journal of Chemical Theory and Computation, Vol. 5, No. 3. (10 March 2009), pp. 615-626. by Andreas Kukol posted to bilayer lipid md order-parameter simulation by dimka on 2009-04-06 22:31:56 as along with 3 people and 1 group arnaucordomi Marine middledomain Molecular dynamics in MSU
	Effects of fatty acid inclusion in a DMPC bilayer membrane. [My Copy] The journal of physical chemistry. B, Vol. 113, No. 1. (8 January 2009), pp. 92-102. by G. H. Peters, F. Y. Hansen, M. S. Møller, P. Westh posted to bilayer cholesterol dmpc lipid membrane simulation by dimka on 2009-03-11 19:24:40 as
	Molecular dynamics study of unbinding of the avidin-biotin complex. [My Copy] Biophysical journal, Vol. 72, No. 4. (April 1997), pp. 1568-1581. by S. Izrailev, S. Stepaniants, M. Balsera, Y. Oono, K. Schulten posted to lipid md pull smd by dimka on 2008-12-26 06:21:54 as
	Extraction of Lipids from Phospholipid Membranes by Steered Molecular Dynamics [My Copy] Journal of Molecular Modeling, Vol. 3, No. 12. (1 December 1997), pp. 473-475. by Sergey Stepaniants, Sergei Izrailev, Klaus Schulten posted to lipid md namd pull smd by dimka on 2008-12-26 05:23:45 as along with 1 person sunnytov
	Molecular Coordinates of Pre-Equilibrated Lipid Systems [My Copy] by J. B. Klauda posted to equilibration lipid md membane by dimka on 2008-11-30 23:40:22 as
	Bilayer thickness and lipid interface area in unilamellar extruded 1,2-diacylphosphatidylcholine liposomes: a small-angle neutron scattering study. [My Copy] Biochimica et biophysica acta, Vol. 1512, No. 1. (2 May 2001), pp. 40-52. by P. Balgavý, M. Dubnicková, N. Kucerka, M. A. Kiselev, S. P. Yaradaikin, D. Uhríková posted to bilayer dlpc dmpc lipid thickness by dimka on 2008-11-25 02:35:06 as
	Performance of the general amber force field in modeling aqueous POPC membrane bilayers [My Copy] Journal of Computational Chemistry, Vol. 28, No. 12. (12 April 2007), pp. 2051-2058. by Balázs Jójárt, Tamás A. Martinek posted to amber lipid md membrane simulation by dimka on 2008-11-11 21:48:17 as along with 3 people and 1 group xdeupi easybakemuffin viktor21614 LabCompMed
	The molecular face of lipid rafts in model membranes [My Copy] Proceedings of the National Academy of Sciences, Vol. 105, No. 45. (11 November 2008), pp. 17367-17372. by H. Jelger Risselada, Siewert J. Marrink posted to lipid md mixture simulations by dimka on 2008-11-07 20:27:12 as along with 8 people and 2 groups richardfranzese ARobson wsjames reister paulschlesinger chiufanlee barry kshundyak Oxford Virology McCammon
	Hydration forces between phospholipid bilayers [My Copy] Biochimica et Biophysica Acta (BBA) - Reviews on Biomembranes, Vol. 988, No. 3. (06 December 1989), pp. 351-376. by R. Rand posted to equilibration lipid md membrane review simulation by dimka on 2008-10-29 00:10:07 as along with 2 people scampos softsimu
	Determination of component volumes of lipid bilayers from simulations. [My Copy] Biophysical journal, Vol. 72, No. 5. (May 1997), pp. 2237-2242. by H. I. Petrache, S. E. Feller, J. F. Nagle posted to dppc lipid md methods simulations volume by dimka on 2008-09-25 21:02:11 as
	Molecular dynamics simulation of hydrated phospholipid bilayers. [My Copy] Indian journal of biochemistry & biophysics, Vol. 33, No. 6. (December 1996), pp. 431-447. by V. Kothekar posted to dmpc lipid md membrane simulation by dimka on 2008-08-20 19:33:30 as
	Conformational Changes and Gating at the Selectivity Filter of Potassium Channels [My Copy] J. Am. Chem. Soc. (28 June 2008) by Carmen Domene, Michael L. Klein, Davide Branduardi, Francesco L. Gervasio, Michele Parrinello posted to kirbac lipid md selectivity simulation by dimka on 2008-07-01 00:10:09 as
	Free-energy analysis of the molecular binding into lipid membrane with the method of energy representation. [My Copy] The Journal of chemical physics, Vol. 128, No. 19. (21 May 2008) by Nobuyuki Matubayasi, Wataru Shinoda, Masaru Nakahara posted to deltag free-energy lipid membrane by dimka on 2008-05-27 23:04:38 as
	Area per Lipid and Acyl Length Distributions in Fluid Phosphatidylcholines Determined by 2H NMR Spectroscopy [My Copy] Biophys. J., Vol. 79, No. 6. (1 December 2000), pp. 3172-3192. by Horia I. Petrache, Steven W. Dodd, Michael F. Brown posted to area lipid lipid-area nmr by dimka on 2008-05-13 22:16:55 as
	Lipid Bilayer Perturbations around a Transmembrane Nanotube: A Coarse Grain Molecular Dynamics Study [My Copy] Biophys. J., Vol. 88, No. 6. (1 June 2005), pp. 3822-3828. by Steve O. Nielsen, Bernd Ensing, Vanessa Ortiz, Preston B. Moore, Michael L. Klein posted to lipid md nanotube perturbation simulation by dimka on 2008-05-13 21:14:16 as along with 2 people Marine loison
	Effect of Ions on a Dipalmitoyl Phosphatidylcholine Bilayer. A Molecular Dynamics Simulation Study [My Copy] J. Phys. Chem. B (15 January 2008) by A. Cordomi, O. Edholm, J. J. Perez posted to dppc lipid lipid-area simulation by dimka on 2008-05-08 23:58:41 as along with 4 people and 1 group arnaucordomi robertvacha sobolevnrm softsimu baker-group
	Biological Membranes: A Molecular Perspective from Computation and Experiment [My Copy] (30 July 1996) by Kenneth Merz, Benoit Roux posted to lipid membrane simulation by dimka on 2008-05-07 07:29:15 as
	Acyl chain order parameter profiles in phospholipid bilayers: computation from molecular dynamics simulations and comparison with 2H NMR experiments [My Copy] European Biophysics Journal, Vol. 36, No. 8. (1 November 2007), pp. 919-931. by Louic Vermeer, Bert de Groot, Valérie Réat, Alain Milon, Jerzy Czaplicki posted to lipid lipid-order-parameter scd simulations by dimka on 2008-03-26 17:46:04 as along with 2 people scampos softsimu
	Energetics of Cholesterol Transfer between Lipid Bilayers. [My Copy] J Phys Chem B (29 February 2008) by Zhancheng Zhang, Lanyuan Lu, Max L. Berkowitz posted to cholesterol deltag energy lipid by dimka on 2008-03-03 04:01:50 as along with 2 people and 1 group sobolevnrm softsimu baker-group
	The Role of Conformation in Ion Permeation in a K+ Channel [My Copy] J. Am. Chem. Soc. (23 February 2008) by C. Domene, S. Vemparala, S. Furini, K. Sharp, M. L. Klein posted to kirbac11 lipid md permeation simulation by dimka on 2008-02-25 00:44:04 as
	Hydrogen Bonding and Binding of Polybasic Residues with Negatively Charged Mixed Lipid Monolayers. [My Copy] Langmuir (23 January 2008) by Christian D. Lorenz, Jordi Faraudo, Alex Travesset posted to charmm dopc dops force-field lipid md membrane pip2 simulations by dimka on 2008-01-24 14:42:43 as along with 1 person priyaps
	Molecular Dynamics Simulations of Ternary Membrane Mixture: Phosphatidylcholine, Phosphatidic Acid, and Cholesterol. [My Copy] J Phys Chem B (5 December 2007) by Mary H. Cheng, Lu T. Liu, Alexander C. Saladino, Yan Xu, Pei Tang posted to lipid md membrane mixture simulations by dimka on 2007-12-11 00:17:42 as along with 2 people and 1 group sobolevnrm easybakemuffin baker-group
	Electrostatic interactions in phospholipid membranes revealed by coherent 2D IR spectroscopy [My Copy] Proceedings of the National Academy of Sciences, Vol. 104, No. 39. (25 September 2007), pp. 15323-15327. by V. V. Volkov, R. Chelli, W. Zhuang, et al.F. Nuti, Y. Takaoka, A. M. Papini, S. Mukamel, R. Righini posted to dmpc experimental lipid md membrane simulation by dimka on 2007-10-31 15:52:35 as along with 1 person and 1 group sobolevnrm baker-group
	An ab Initio Study on the Torsional Surface of Alkanes and Its Effect on Molecular Simulations of Alkanes and a DPPC Bilayer [My Copy] J. Phys. Chem. B, Vol. 109, No. 11. (24 March 2005), pp. 5300-5311. by J. B. Klauda, B. R. Brooks, A. D. Mackerell, R. M. Venable, R. W. Pastor posted to dppc force-field lipid simulations by dimka on 2007-10-15 19:50:26 as along with 1 person easybakemuffin
	Short range order and collective dynamics of DMPC bilayers. A comparison between molecular dynamics simulations, x-ray, and neutron scattering experiments [My Copy] Biophys. J. (13 July 2007), biophysj.107.104885. by Jochen S. Hub, Tim Salditt, Maikel C. Rheinstadter, Bert L. de Groot posted to dmpc lipid md membrane by dimka on 2007-07-22 06:40:35 as along with 3 people and 1 group sobolevnrm char paulschlesinger baker-group
	Molecular Dynamics Simulations of C-Terminal Decapeptide of Gastrin-Releasing Peptide in DMPC Bilayers: Structure, Stability and Orientation of the Peptide Hormone Within the Bilayers [My Copy] Protein and Peptide Letters, Vol. 14, No. 6. (June 2007), pp. 590-596. by Priyanka Prakash, , Ramasubbu Sankararamakrishnan, posted to dmpc lipid md membrane pro by dimka on 2007-07-22 06:28:44 as
	Molecular dynamics simulation of an archaeal lipid bilayer with sodium chloride. [My Copy] Phys Chem Chem Phys, Vol. 9, No. 5. (7 February 2007), pp. 643-650. by K. Shinoda, W. Shinoda, M. Mikami posted to lipid md membrane simulations by dimka on 2007-04-26 04:11:50 as
	Molecular simulation study of the influence of small molecules on the dynamic and structural properties of phospholipid bilayers. [My Copy] Chem Biodivers, Vol. 2, No. 11. (November 2005), pp. 1503-1516. by A. K. Sum posted to lipid md membrane by dimka on 2007-01-03 18:36:19 as along with 1 person softsimu
	Using cryo-EM to measure the dipole potential of a lipid membrane. [My Copy] Proc Natl Acad Sci U S A, Vol. 103, No. 49. (5 December 2006), pp. 18528-18533. by L. Wang, P. S. Bose, F. J. Sigworth posted to cryo-em lipid md by dimka on 2006-12-13 21:22:10 as
	Molecular dynamics simulation of a palmitoyl-oleoyl phosphatidylserine bilayer with Na+ counterions and NaCl. [My Copy] Biophys J, Vol. 86, No. 3. (March 2004), pp. 1601-1609. by P. Mukhopadhyay, L. Monticelli, D. P. Tieleman posted to bilayer lipid md membrane pops properties by dimka on 2006-12-11 01:32:28 as along with 3 people easybakemuffin softsimu robertvacha
	MD simulation of asymmetric phospholipid bilayers with ions and cholesterols [My Copy] Chem-Bio Informatics Journal, Vol. 4, No. 1. (2004), pp. 15-26. by Kenichi Mori, Masayuki Hata, Saburo Neya, Tyuji Hoshino posted to asymmetry bilayer chlesterol lipid md popc pope pops by dimka on 2006-12-10 23:36:30 as
	Dynamics in atomistic simulations of phospholipid membranes: Nuclear magnetic resonance relaxation rates and lateral diffusion. [My Copy] J Chem Phys, Vol. 125, No. 20. (28 November 2006) by J. Wohlert, O. Edholm posted to diffusion dppc lipid md membrane nmr by dimka on 2006-12-07 18:43:57 as
	Ion Conduction through MscS as Determined by Electrophysiology and Simulation. [My Copy] Biophys J, Vol. 92, No. 3. (17 February 2007), pp. 886-902. by Marcos Sotomayor, Valeria Vasquez, Eduardo Perozo, Klaus Schulten posted to channel lipid membrane mscs simulation by dimka on 2006-11-28 20:25:33 as
	Coarse-grained molecular dynamics simulations of membrane proteins and peptides. [My Copy] J Struct Biol (20 October 2006) by Peter J J. Bond, John Holyoake, Anthony Ivetac, Syma Khalid, Mark S P S. Sansom posted to coarse-grain lipid membrane protein by dimka on 2006-11-28 20:20:31 as along with 4 people krapnik paulschlesinger choonpeng sunnytov
	Investigation of finite system-size effects in molecular dynamics simulations of lipid bilayers. [My Copy] J Phys Chem B Condens Matter Mater Surf Interfaces Biophys, Vol. 110, No. 47. (30 November 2006), pp. 24157-24164. by F. Castro-Roman, R. W. Benz, S. H. White, D. J. Tobias posted to dopc lipid simulation by dimka on 2006-11-28 20:18:25 as along with 1 person nbrayali
	Atomistic simulations of biologically realistic transmembrane potential gradients. [My Copy] J Chem Phys, Vol. 121, No. 22. (8 December 2004), pp. 10847-10851. by J. N. Sachs, P. S. Crozier, T. B. Woolf posted to ion lipid md membrane membrane_potential by dimka on 2006-11-10 22:28:44 as
	The role of electrostatics in protein-membrane interactions [My Copy] Biochimica et Biophysica Acta (BBA) - Molecular and Cell Biology of Lipids In Lipid-Binding Domains, Vol. 1761, No. 8. (August 2006), pp. 812-826. by Anna Mulgrew-Nesbitt, Karthikeyan Diraviyam, Jiyao Wang, et al.Shaneen Singh, Paul Murray, Zhaohui Li, Laura Rogers, Nebojsa Mirkovic, Diana Murray posted to lipid lipid-protein pip2 protein simulations by dimka on 2006-11-05 19:29:03 as along with 1 person kallberg
	Molecular dynamics simulation of melittin in a dimyristoylphosphatidylcholine bilayer membrane. [My Copy] Biophys J, Vol. 75, No. 4. (October 1998), pp. 1603-1618. by S. Bernèche, M. Nina, B. Roux posted to sse model melitten lipid dmpc bilayer by dimka on 2006-09-27 01:27:13 as along with 2 people and 1 group priyaps sobolevnrm baker-group
	Mixed Atomistic and Coarse-Grained Molecular Dynamics: Simulation of a Membrane-Bound Ion Channel [My Copy] The Journal of Physical Chemistry B, Vol. 110, No. 31. (1 August 2006), pp. 15045-15048. by Qiang Shi, Sergei Izvekov, Gregory A. Voth posted to coarse-grain lipid md membrane protein by dimka on 2006-09-25 22:05:23 as along with 3 people flbarroso arnaucordomi RamuAnandakrishnan
	FRET Study of Membrane Proteins: Simulation-Based Fitting for Analysis of Membrane Protein Embedment and Association [My Copy] Biophys. J., Vol. 91, No. 2. (15 July 2006), pp. 454-466. by Petr V. Nazarov, Rob B. Koehorst, Werner L. Vos, Vladimir V. Apanasovich, Marcus A. Hemminga posted to fret lipid membrane protein by dimka on 2006-09-12 19:36:43 as along with 1 person xdeupi
	Coupling between Lipid Shape and Membrane Curvature [My Copy] Biophys. J., Vol. 91, No. 2. (15 July 2006), pp. 487-495. by Ira R. Cooke, Markus Deserno posted to coarse-grain curvature lipid model shape by dimka on 2006-09-12 19:34:57 as along with 1 person kupopo

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md	100
pip2	100
channel	85
structure	84
lipid	81
membrane	72
kir	61
protein	61
mmult-ref	60
gating	47
simulation	47
molecular	44
phosphatidylinositol	38
potassium	38
simulations	38
review	37
ph	34
ph-sensor	33
sequence	33
romk	29
ion	25
katp	24
alignment	22
bilayer	22
conformation	21
dppc	21
kir62	21
classification	20
kcsa	20
models	20
irk1	19
kir21	17
binding	15
electrostatics	15
inositol	15
mutation	15
peptide	14
amp	13
domain	12
inwardly	12
kir11	12
mutagenesis	12
adenosine	11
analysis	11
cholesterol	11
crystallography	11
electrophysiology	11
gtp-binding	11
tertiary	11
triphosphate	11
dmpc	10
free-energy	10
girk	10
g-protein	10
kinetics	10
multiple	10
charmm	9
conductivity	9
homology	9
humans	9
inhibitor	9
model	9
nmr	9
patch-clamp	9
pore	9
smallmol	9
structure-activity	9
thermodynamics	9
automatic	8
coarse-grain	8
fluorescence	8
girk1	8
headgroup	8
kir31	8
kir41	8
kirbac11	8
kv12	8
ligand	8
open-closed	8
phospholipase	8
phosphorylation	8
proteins	8
atp	7
calcium	7
deltag	7
force-field	7
gromacs	7
methods	7
pca	7
phosphate	7
protein-lipid	7
rats	7
recombinant	7
relationship	7
scop	7
site-directed	7
sites	7
transduction	7
ach	6
activation	6
chimera	6
disease	6
dna	6
dynamics	6
folding	6
heart	6
interaction	6
kir23	6
kv	6
laevis	6
microscopy	6
open	6
permeation	6
phosphatidylcholine	6
phosphoinositides	6
popc	6
rectify	6
secondary	6
signal	6
sodium	6
software	6
specificity	6
voltage-gated	6
cations	5
cell	5
diffusion	5
enzyme	5
guanosine	5
heterotrimeric	5
identification	5
ip3	5
kir34	5
lipid-area	5
md-analysis	5
mechanosensitive	5
membrane-protein	5
modeling	5
mscl	5
muscarinic	5
myocardium	5
namd	5
orientation	5
partition	5
polyamines	5
rectifying	5
selectivity	5
techniques	5
tool	5
voltage	5
1-phosphatidylinositol	4
algorithm	4
bacterial	4
blocker	4
blood	4
chemistry	4
concentration	4
crystal	4
cytoplasm	4
database	4
derivatives	4
desease	4
desmond	4
distribution	4
dopc	4
electrostatic	4
equilibration	4
hydrogen-ion	4
hydrolysis	4
implicit	4
inhibition	4
inositiol	4
irk3	4
kir51	4
kirbac31	4
lipid-protein	4
modeller	4
montecarlo	4
pdb	4
phosphoprotein	4
pip3	4
pressure	4
receptor	4
rectification	4
single-channel	4
synthesis	4
trajectory	4
transport	4
3-kinase	3
ab-initio	3
ach-receptor-channel	3
acyl-coa	3
assembly	3
bartter	3
biological	3
biophysics	3
book	3
brownian	3
charge	3
charmm27	3
chemical	3
comparative	3
compare	3
competitive	3
computation	3
cultured	3
cysteine	3
cytoplasmic	3
cytoskeleton	3
cytosol	3
data	3
diffraction	3
dimyristoyl	3
docking	3
drug-design	3
effects	3
electric	3
experimental	3
factor	3
fep	3
force-fields	3
function	3
gb	3
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girk4	3
glycine	3
gromos	3
growth	3
helix	3
implicit-membrane	3
isoenzyme	3
k-channel	3
kir2	3
kir3	3
kvap	3
lc-coa	3
lipid-order-parameter	3
macromolecular	3
magnesium	3
mcd	3
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mice	3
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oocyte	3
pb	3
pcm	3
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pip2-binding	3
pkc	3
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predict	3
program	3
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pull	3
rdf	3
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shaker	3
smd	3
spectroscopy	3
statistics	3
syndrome	3
temperature	3
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2d	2
5-o-3-thiotriphosphate	2
acetate	2
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andersen	2
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area	2
arginine	2
assesment	2
atria	2
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beta-gamma	2
binding-energy	2
bioinformatics	2
bonding	2
camp	2
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cath	2
cells	2
cercopithecus	2
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cho	2
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co2	2
coa	2
computational	2
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dielectric	2
diglycerides	2
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epsin	2
esp	2
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ied	2
ige-receptor	2
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long	2
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lysine	2
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mc	2
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mscs	2
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nerve	2
nose-hoover	2
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nucleus	2
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porin	2
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pseudomallei	2
quantum	2
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radiation	2
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score	2
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simulaid	2
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substrate	2
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tea	2
tetradecanoylphorbol	2
theory	2
transcription	2
tree	2
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tutorial	2
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vdw	2
vesicle	2
visualization	2
vmd	2
water	2
110-decanediamine	1
1-12-dodecanediamine	1
2-naphthylamine	1
3d-to-2d	1
3-ribose	1
45-bisphosphate	1
4-aminopyridine	1
abundance	1
academy	1
achr	1
actin-binding	1
adaptor	1
afm	1
ala-scanning	1
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amber	1
aminopyridine	1
amyloid-beta	1
analog	1
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analyais	1
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angie	1
animal	1
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ba	1
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beta-adrenoceptor	1
bilayers	1
binding-site	1
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bonds	1
build	1
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c27r	1
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cg	1
cgmp	1
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chloride	1
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cloning	1
close	1
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cryem	1
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culstering	1
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cytochrome	1
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da10	1
da12	1
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density	1
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diffusion_coefficients	1
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dppe	1
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electrophy	1
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em	1
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emf	1
endocytosis	1
endothelin	1
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ige	1
iglur	1
ikvol	1
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immunology	1
implicit-water	1
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insertion	1
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ionic-strength	1
ip7	1
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oleic	1
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ompf	1
ompla	1
oocytes	1
opls	1
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oxidative	1
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pc	1
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phase	1
phenylalanine	1
phenylephrine	1
pho-his	1
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phosphatidylethanolamine	1
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pi34p2	1
pi3k	1
pi-3-kinase	1
piperazine	1
piperidine	1
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pis	1
pka	1
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plc	1
pme	1
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polymerase	1
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potasium	1
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pro	1
probability	1
proline	1
protein_structure	1
protein-structure	1
protein-tyrosine	1
proximity-analysis	1
ptx	1
pxoom	1
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qcdf	1
qm	1
qt	1
quality	1
r	1
radii	1
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ras	1
rattle	1
recognition	1
rectifier	1
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rev1	1
rhodopsin	1
ribonuclease	1
rip	1
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rotamer	1
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s143f	1
sarcolem	1
sca	1
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science	1
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screening	1
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second	1
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sensor	1
sequence-identity	1
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server	1
setup	1
shake	1
shape	1
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silver	1
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simulstions	1
small	1
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stimulation	1
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subunit	1
sulf	1
sulfonyurea	1
sulfur	1
superfamily	1
sur1	1
sur2	1
synaptic	1
systems	1
template	1
tendem	1
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tertiapin	1
thickness	1
thionucleotide	1
timescale	1
transferase	1
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transmembrane	1
trehalose	1
trp8	1
trp-channel	1
trpm4	1
tubules	1
two-pore	1
typology	1
v302m	1
vector	1
venom	1
viewer	1
viral	1
voltage-sensor	1
volume	1
water-protein	1

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