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djkt's Nielsen [13 articles]

Recent papers posted to djkt's library by the author Nielsen. You can also see everyone's Nielsen.
  • Patterns of Positive Selection in Six Mammalian Genomes
    PLoS Genet, Vol. 4, No. 8. (2008), e1000144.
    by Carolin Kosiol, Tomáš Vinař, Rute R da Fonseca, Melissa J Hubisz, Carlos D Bustamante, Rasmus Nielsen, Adam Siepel
    posted to evolution mammals selection by djkt on 2008-08-01 18:26:18 as read along with 4 people bpcusack gjuggler cabbagesofdoom hdopazo
  • Population genetic analysis of shotgun assemblies of genomic sequences from multiple individuals
    Genome Res., Vol. 18, No. 7. (1 July 2008), pp. 1020-1029.
    by Ines Hellmann, Yuan Mang, Zhiping Gu, Peter Li, de La, Andrew G Clark, Rasmus Nielsen
    posted to human popgen sequencing by djkt on 2008-07-01 19:13:57 as ** along with 4 people APRegier balicea Neeperando serdarbozdag
  • Proportionally more deleterious genetic variation in European than in African populations
    Nature, Vol. 451, No. 7181. (21 February 2008), pp. 994-997.
    by Kirk E Lohmueller, Amit R Indap, Steffen Schmidt, Adam R Boyko, Ryan D Hernandez, Melissa J Hubisz, John J Sninsky, Thomas J White, Shamil R Sunyaev, Rasmus Nielsen, Andrew G Clark, Carlos D Bustamante
    posted to popgen selection by djkt on 2008-02-21 19:21:34 as ** along with 3 people and 1 group caseybrown mailund ramensky Fasting, food and evolution
  • Evolutionary and Biomedical Insights from the Rhesus Macaque Genome
    Science, Vol. 316, No. 5822. (13 April 2007), pp. 222-234.
    by Rhesus, Richard A Gibbs, Jeffrey Rogers, Michael G Katze, Roger Bumgarner, George M Weinstock, Elaine R Mardis, Karin A Remington, Robert L Strausberg, Craig J Venter, Richard K Wilson, Mark A Batzer, Carlos D Bustamante, Evan E Eichler, Matthew W Hahn, Ross C Hardison, Kateryna D Makova, Webb Miller, Aleksandar Milosavljevic, Robert E Palermo, Adam Siepel, James M Sikela, Tony Attaway, Stephanie Bell, Kelly E Bernard, Christian J Buhay, Mimi N Chandrabose, Marvin Dao, Clay Davis, Kimberly D Delehaunty, Yan Ding, Huyen H Dinh, Shannon Dugan-Rocha, Lucinda A Fulton, Ramatu A Gabisi, Toni T Garner, Jennifer Godfrey, Alicia C Hawes, Judith Hernandez, Sandra Hines, Michael Holder, Jennifer Hume, Shalini N Jhangiani, Vandita Joshi, Ziad M Khan, Ewen F Kirkness, Andrew Cree, Gerald R Fowler, Sandra Lee, Lora R Lewis, Zhangwan Li, Yih-Shin Liu, Stephanie M Moore, Donna Muzny, Lynne V Nazareth, Dinh N Ngo, Geoffrey O Okwuonu, Grace Pai, David Parker, Heidie A Paul, Cynthia Pfannkoch, Craig S Pohl, Yu-Hui Rogers, San J Ruiz, Aniko Sabo, Jireh Santibanez, Brian W Schneider, Scott M Smith, Erica Sodergren, Amanda F Svatek, Teresa R Utterback, Selina Vattathil, Wesley Warren, Courtney S White, Asif T Chinwalla, Yucheng Feng, Aaron L Halpern, Ladeana W Hillier, Xiaoqiu Huang, Pat Minx, Joanne O Nelson, Kymberlie H Pepin, Xiang Qin, Granger G Sutton, Eli Venter, Brian P Walenz, John W Wallis, Kim C Worley, Shiaw-Pyng Yang, Steven M Jones, Marco A Marra, Mariano Rocchi, Jacqueline E Schein, Robert Baertsch, Laura Clarke, Miklos Csuros, Jarret Glasscock, Alan R Harris, Paul Havlak, Andrew R Jackson, Huaiyang Jiang, Yue Liu, David N Messina, Yufeng Shen, Henry X Song, Todd Wylie, Lan Zhang, Ewan Birney, Kyudong Han, Miriam K Konkel, Jungnam Lee, Arian F Smit, Brygg Ullmer, Hui Wang, Jinchuan Xing, Richard Burhans, Ze Cheng, John E Karro, Jian Ma, Brian Raney, Xinwei She, Michael J Cox, Jeffery P Demuth, Laura J Dumas, Sang-Gook Han, Janet Hopkins, Anis Karimpour-Fard, Young H Kim, Jonathan R Pollack, Tomas Vinar, Charles Addo-Quaye, Jeremiah Degenhardt, Alexandra Denby, Melissa J Hubisz, Amit Indap, Carolin Kosiol, Bruce T Lahn, Heather A Lawson, Alison Marklein, Rasmus Nielsen, Eric J Vallender, Andrew G Clark, Betsy Ferguson, Ryan D Hernandez, Kashif Hirani, Hildegard Kehrer-Sawatzki, Jessica Kolb, Shobha Patil, Ling-Ling Pu, Yanru Ren, David G Smith, David A Wheeler, Ian Schenck, Edward V Ball, Rui Chen, David N Cooper, Belinda Giardine, Fan Hsu, James W Kent, Arthur Lesk, David L Nelson, William E O'Brien, Kay Prufer, Peter D Stenson, James C Wallace, Hui Ke, Xiao-Ming Liu, Peng Wang, Andy P Xiang, Fan Yang, Galt P Barber, David Haussler, Donna Karolchik, Andy D Kern, Robert M Kuhn, Kayla E Smith, Ann S Zwieg
    posted to genome primates by djkt on 2007-04-13 18:30:18 as *** along with 4 people and 4 groups dchughes stajich hpaces Garamonfok Bioinformatics G4ID Genetics-of-Gambling Berkeley Mycology
  • Demographic Histories and Patterns of Linkage Disequilibrium in Chinese and Indian Rhesus Macaques
    Science, Vol. 316, No. 5822. (13 April 2007), pp. 240-243.
    by Ryan D Hernandez, Melissa J Hubisz, David A Wheeler, David G Smith, Betsy Ferguson, Jeffrey Rogers, Lynne Nazareth, Amit Indap, Traci Bourquin, John Mcpherson, Donna Muzny, Richard Gibbs, Rasmus Nielsen, Carlos D Bustamante
    posted to popgen primates by djkt on 2007-04-13 18:28:47 as ** along with 2 people and 2 groups dchughes usagi-kirin G4ID Genetics-of-Gambling
  • Inferring nonneutral evolution from human-chimp-mouse orthologous gene trios.
    Science, Vol. 302, No. 5652. (12 December 2003), pp. 1960-1963.
    by AG Clark, S Glanowski, R Nielsen, PD Thomas, A Kejariwal, MA Todd, DM Tanenbaum, D Civello, F Lu, B Murphy, S Ferriera, G Wang, X Zheng, TJ White, JJ Sninsky, MD Adams, M Cargill
    posted to evolution primates proteins rodents selection by djkt on 2006-08-04 01:37:25 as read along with 4 people and 1 group ejeffery gjuggler hdopazo Ema BioinfoCIPF
  • Ascertainment bias in studies of human genome-wide polymorphism.
    Genome Res, Vol. 15, No. 11. (November 2005), pp. 1496-1502.
    by AG Clark, MJ Hubisz, CD Bustamante, SH Williamson, R Nielsen
    posted to design popgen snps by djkt on 2006-08-04 01:23:20 as read along with 4 people and 1 group stevanspringer chrn ashandanj jermth FAB-lab
  • The discovery of single-nucleotide polymorphisms--and inferences about human demographic history.
    Am J Hum Genet, Vol. 69, No. 6. (December 2001), pp. 1332-1347.
    by J Wakeley, R Nielsen, SN Liu-Cordero, K Ardlie
    posted to design evolution popgen snps by djkt on 2006-08-04 01:22:38 as read
  • A scan for positively selected genes in the genomes of humans and chimpanzees.
    PLoS Biol, Vol. 3, No. 6. (June 2005)
    by R Nielsen, C Bustamante, AG Clark, S Glanowski, TB Sackton, MJ Hubisz, A Fledel-Alon, DM Tanenbaum, D Civello, TJ White, J J Sninsky, MD Adams, M Cargill
    posted to evolution primates proteins selection by djkt on 2006-08-04 00:46:39 as read along with 6 people and 3 groups stevanspringer jwortman bpb penka hdopazo iris42 Nie FAB-lab BioinfoCIPF
  • Detecting selection in noncoding regions of nucleotide sequences.
    Genetics, Vol. 167, No. 2. (June 2004), pp. 949-958.
    by WS Wong, R Nielsen
    posted to evolution proteins selection by djkt on 2006-08-04 00:20:59 as read along with 1 person and 1 group cisevol cis-regulatory-evolution
  • Natural selection on protein-coding genes in the human genome
    Nature, Vol. 437, No. 7062., pp. 1153-1157.
    by Carlos D Bustamante, Adi Fledel-Alon, Scott Williamson, Rasmus Nielsen, Melissa T Hubisz, Stephen Glanowski, David M Tanenbaum, Thomas J White, John J Sninsky, Ryan D Hernandez, Daniel Civello, Mark D Adams, Michele Cargill, Andrew G Clark
    posted to acceleration evolution msa proteins selection by djkt on 2006-08-03 23:42:14 as read along with 15 people and 5 groups stevanspringer operon jwortman aprasad dayjm balajis marcius dpollard hdopazo JBEgwa01 ramensky Garamonfok iris42 dmc shoshin EisenLab FAB-lab BioinfoCIPF SGU-CIPF Durbin group
  • The cost of inbreeding in Arabidopsis.
    Nature, Vol. 416, No. 6880. (4 April 2002), pp. 531-534.
    by CD Bustamante, R Nielsen, SA Sawyer, KM Olsen, MD Purugganan, DL Hartl
    posted to evolution popgen selection by djkt on 2006-08-03 23:26:48 as read along with 1 person and 1 group dpollard EisenLab
  • Statistical tests of selective neutrality in the age of genomics.
    Heredity, Vol. 86, No. Pt 6. (June 2001), pp. 641-647.
    by R Nielsen
    posted to evolution review selection by djkt on 2006-08-03 23:24:27 as read along with 2 people jbsaltz operon
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