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djkt's alignment [8 articles]

Recent papers added to djkt's library classified by the tag alignment. You can also see everyone's alignment.
  • Segment-based multiple sequence alignment
    Bioinformatics, Vol. 24, No. 16. (15 August 2008), pp. i187-192.
    by Tobias Rausch, Anne-Katrin Emde, David Weese, Andreas Doring, Cedric Notredame, Knut Reinert
    posted to alignment msa by djkt on 2008-08-09 17:19:25 as ** along with 6 people zwang Ema APRegier aprasad groepl chad_davis
  • Phylogeny-Aware Gap Placement Prevents Errors in Sequence Alignment and Evolutionary Analysis
    Science, Vol. 320, No. 5883. (20 June 2008), pp. 1632-1635.
    by Ari Loytynoja, Nick Goldman
  • A Probabilistic Model of Local Sequence Alignment That Simplifies Statistical Significance Estimation
    by Sean Eddy
    posted to alignment by djkt on 2008-05-31 00:45:04 as **
  • Uncertainty in homology inferences: Assessing and improving genomic sequence alignment
    Genome Res., Vol. 18, No. 2. (1 February 2008), pp. 298-309.
    by Gerton Lunter, Andrea Rocco, Naila Mimouni, Andreas Heger, Alexandre Caldeira, Jotun Hein
  • Alignment Uncertainty and Genomic Analysis
    Science, Vol. 319, No. 5862. (25 January 2008), pp. 473-476.
    by Karen M Wong, Marc A Suchard, John P Huelsenbeck
  • Phylocomposer and phylodirector: analysis and visualization of transducer indel models
    Bioinformatics, Vol. 23, No. 23. (1 December 2007), pp. 3263-3264.
    by Ian Holmes
  • Transducers: an emerging probabilistic framework for modeling indels on trees
    Bioinformatics, Vol. 23, No. 23. (1 December 2007), pp. 3258-3262.
    by Robert K Bradley, Ian Holmes
    posted to alignment evolution indel by djkt on 2007-11-27 16:59:06 as ** along with 2 people druvus ryanraaum
  • Phylogenetic Simulation of Promoter Evolution: Estimation and Modeling of Binding Site Turnover Events and Assessing Their Impact on Alignment Tools
    Genome Biology, Vol. 8 (24 October 2007), R225.
    by Weichun Huang, Joseph R Nevins, Uwe Ohler
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