djkt's diversity [34 articles] Export

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	Global patterns of speciation and diversity [My Copy] Nature, Vol. 460, No. 7253. (16 July 2009), pp. 384-387. by M. A. M. de Aguiar, M. Baranger, E. M. Baptestini, L. Kaufman, Y. Bar-Yam posted to community diversity ecology environment simulation speciation theory by djkt on 2009-07-15 19:35:21 as along with 6 people and 1 group operon kinestetika sharpton jago melo_mcr dinnes iSEEM
	Geographical structure and differential natural selection among North European populations. [My Copy] Genome research, Vol. 19, No. 5. (5 May 2009), pp. 804-814. by B. P. McEvoy, G. W. Montgomery, A. F. McRae, et al.S. Ripatti, M. Perola, T. D. Spector, L. Cherkas, K. R. Ahmadi, D. Boomsma, G. Willemsen, J. J. Hottenga, N. L. Pedersen, P. K. Magnusson, K. O. Kyvik, K. Christensen, J. Kaprio, K. Heikkilä, A. Palotie, E. Widen, J. Muilu, A. C. Syvänen, U. Liljedahl, O. Hardiman, S. Cronin, L. Peltonen, N. G. Martin, P. M. Visscher posted to demography diversity geography human popgen selection by djkt on 2009-05-02 02:40:24 as along with 4 people jmeppley xingxu dbensasson Terkko
	Global distribution of genomic diversity underscores rich complex history of continental human populations [My Copy] Genome Research, Vol. 19, No. 5. (May 2009), pp. 795-803. by Adam Auton, Katarzyna Bryc, Adam R. Boyko, et al.Kirk E. Lohmueller, John Novembre, Andy Reynolds, Amit Indap, Mark H. Wright, Jeremiah D. Degenhardt, Ryan N. Gutenkunst, Karen S. King, Matthew R. Nelson, Carlos D. Bustamante posted to demography diversity human popgen by djkt on 2009-05-02 02:38:29 as along with 4 people dbensasson psique xingxu daforerog
	Polymorphism Data Can Reveal the Origin of Species Abundance Statistics [My Copy] PLoS Comput Biol, Vol. 5, No. 4. (24 April 2009), e1000359. by Yosef E. Maruvka, Nadav M. Shnerb posted to diversity popgen species_abundance by djkt on 2009-04-24 23:26:23 as along with 1 person and 1 group jmeppley iSEEM
	An Unbiased Estimator of Gene Diversity in Samples Containing Related Individuals [My Copy] Mol Biol Evol, Vol. 26, No. 3. (1 March 2009), pp. 501-512. by Michael Degiorgio, Noah A. Rosenberg posted to diversity popgen proteins by djkt on 2009-02-13 17:23:52 as
	Bread, beer and wine: Saccharomyces cerevisiae diversity reflects human history [My Copy] Molecular Ecology, Vol. 16, No. 10. (May 2007), pp. 2091-2102. by Jean-Luc Legras, Didier Merdinoglu, Jean-Marie Cornuet, Francis Karst posted to diversity human popgen yeast by djkt on 2009-01-20 22:02:12 as along with 1 person and 1 group dbensasson iSEEM
	Metagenomics reveals our incomplete knowledge of global diversity. [My Copy] Bioinformatics (Oxford, England) (13 July 2008) by Miguel Pignatelli, Gabriel Aparicio, Ignacio Blanquer, Vicente Hernández, Andrés Moya, Javier Tamames posted to diversity metagenomics by djkt on 2008-09-05 19:09:34 as along with 10 people and 3 groups hwright Thaverkamp jmeppley microrita skembel druvus vaulot reyez bootsy nuin Papers recommended by the Roscoff Plankton Group Microbial-Ecology iSEEM
	Phylocom: software for the analysis of phylogenetic community structure and trait evolution [My Copy] Bioinformatics, Vol. 24, No. 18. (15 September 2008), pp. 2098-2100. by Campbell O. Webb, David D. Ackerly, Steven W. Kembel posted to diversity phylogenetics by djkt on 2008-09-05 19:03:43 as along with 1 person and 2 groups skembel phylocom iSEEM
	Computational Improvements Reveal Great Bacterial Diversity and High Metal Toxicity in Soil [My Copy] Science, Vol. 309, No. 5739. (26 August 2005), pp. 1387-1390. by Jason Gans, Murray Wolinsky, John Dunbar posted to diversity ecology metagenomics microbes by djkt on 2008-08-15 18:22:43 as along with 4 people and 1 group knaseanka jmeppley paleorthid jlgreen iSEEM
	Hindsight in the relative abundance, metabolic potential and genome dynamics of uncultivated marine archaea from comparative metagenomic analyses of bathypelagic plankton of different oceanic regions [My Copy] ISME J, Vol. 2, No. 8. (May 2008), pp. 865-886. by Ana-Belen Martin-Cuadrado, Francisco Rodriguez-Valera, David Moreira, et al.Jose C. Alba, Elena Ivars-Martinez, Matthew R. Henn, Emmanuel Talla, Purificacion Lopez-Garcia posted to diversity ecology metagenomics microbes by djkt on 2008-08-08 02:28:19 as along with 2 people and 2 groups anphony jlgreen Green Lab iSEEM
	The rational exploration of microbial diversity [My Copy] ISME (2008) by Christopher Quince, Thomas P. Curtis, William T. Sloan posted to diversity metagenomics microbes by djkt on 2008-08-08 02:14:18 as along with 2 people and 2 groups anphony jlgreen Green Lab iSEEM
	The evolutionary ecology of metacommunities. [My Copy] Trends in ecology & evolution (Personal edition), Vol. 23, No. 6. (June 2008), pp. 311-317. by M. C. Urban, M. A. Leibold, P. Amarasekare, et al.L. De Meester, R. Gomulkiewicz, M. E. Hochberg, C. A. Klausmeier, N. Loeuille, C. de Mazancourt, J. Norberg, J. H. Pantel, S. Y. Strauss, M. Vellend, M. J. Wade posted to diversity ecology evolution by djkt on 2008-08-08 02:01:48 as along with 4 people and 2 groups maren anphony skumagai jlgreen Green Lab iSEEM
	Biogeography: An Emerging Cornerstone for Understanding Prokaryotic Diversity, Ecology, and Evolution [My Copy] Microbial Ecology, Vol. 53, No. 2. (February 2007), pp. 197-207. by Ramette, Alban, Tiedje, James posted to diversity ecology evolution metagenomics microbes by djkt on 2008-07-29 21:13:00 as along with 2 people and 2 groups hwright jlgreen Green Lab iSEEM
	Biodiversity and biogeography of phages in modern stromatolites and thrombolites [My Copy] Nature (02 March 2008) by Christelle Desnues, Beltran Rodriguez-Brito, Steve Rayhawk, et al.Scott Kelley, Tuong Tran, Matthew Haynes, Hong Liu, Mike Furlan, Linda Wegley, Betty Chau, Yijun Ruan, Dana Hall, Florent E. Angly, Robert A. Edwards, Linlin Li, Rebecca V. Thurber, Pamela R. Reid, Janet Siefert, Valeria Souza, David L. Valentine, Brandon K. Swan, Mya Breitbart, Forest Rohwer posted to diversity ecology metagenomics virus by djkt on 2008-07-29 20:46:52 as along with 2 people and 2 groups dayjm jlgreen Green Lab iSEEM
	From the Cover: A latitudinal diversity gradient in planktonic marine bacteria [My Copy] Proceedings of the National Academy of Sciences, Vol. 105, No. 22. (3 June 2008), pp. 7774-7778. by Jed A. Fuhrman, Joshua A. Steele, Ian Hewson, et al.Michael S. Schwalbach, Mark V. Brown, Jessica L. Green, James H. Brown posted to diversity ecology microbes by djkt on 2008-07-29 20:44:34 as along with 6 people and 4 groups hwright paulm skembel skato_toyaku jlgreen vaulot Green Lab iSEEM Microbial-Ecology Papers recommended by the Roscoff Plankton Group
	Spatial scaling of microbial biodiversity [My Copy] Trends in Ecology & Evolution, Vol. 21, No. 9. (September 2006), pp. 501-507. by Jessica Green, Brendan J. Bohannan posted to diversity ecology microbes review by djkt on 2008-07-29 20:41:15 as along with 7 people and 3 groups fornstar liucun jmeppley cmm mcox vrich jlgreen FAB-lab Green Lab iSEEM
	The tragedy of the uncommon: understanding limitations in the analysis of microbial diversity. [My Copy] The ISME journal (8 May 2008) by Stephen J J. Bent, Larry J J. Forney posted to diversity metagenomics microbes by djkt on 2008-07-29 19:48:18 as along with 7 people and 4 groups lorenalizarraga80 microrita druvus vaulot jdelcampo jlgreen skembel Papers recommended by the Roscoff Plankton Group Microbial-Ecology Green Lab iSEEM
	Viral population estimation using pyrosequencing. [My Copy] PLoS computational biology, Vol. 4, No. 4. (9 April 2008), e1000074. by Nicholas Eriksson, Lior Pachter, Yumi Mitsuya, et al.Soo-Yon Y. Rhee, Chunlin Wang, Baback Gharizadeh, Mostafa Ronaghi, Robert W. Shafer, Niko Beerenwinkel posted to diversity metagenomics popgen virus by djkt on 2008-07-24 23:16:52 as along with 6 people and 2 groups nfparrish ghattem jonilaserson hpaces jmeppley bmaust SIMR bioinformatics iSEEM
	The application of rarefaction techniques to molecular inventories of microbial diversity. [My Copy] Methods Enzymol, Vol. 397 (2005), pp. 292-308. by J. B. Hughes, J. J. Hellmann posted to diversity metagenomics microbes by djkt on 2008-07-24 19:00:05 as along with 1 person and 1 group rabu iSEEM
	Quantitative and Qualitative beta Diversity Measures Lead to Different Insights into Factors That Structure Microbial Communities [My Copy] Appl. Environ. Microbiol., Vol. 73, No. 5. (1 March 2007), pp. 1576-1585. by Catherine A. Lozupone, Micah Hamady, Scott T. Kelley, Rob Knight posted to diversity metagenomics by djkt on 2008-07-24 18:59:15 as along with 2 people and 1 group liucun Olaf_Ilzins iSEEM
	Global patterns in bacterial diversity [My Copy] by Catherine A. Lozupone, Rob Knight posted to diversity metagenomics microbes review by djkt on 2008-07-24 18:58:06 as along with 1 group iSEEM
	What is the extent of prokaryotic diversity? [My Copy] Philos Trans R Soc Lond B Biol Sci, Vol. 361, No. 1475. (29 November 2006), pp. 2023-2037. by T. P. Curtis, I. M. Head, M. Lunn, S. Woodcock, P. D. Schloss, W. T. Sloan posted to diversity review by djkt on 2008-07-24 18:56:17 as along with 1 person and 2 groups kinestetika microbiology_nijmegen iSEEM
	A statistical toolbox for metagenomics: assessing functional diversity in microbial communities. [My Copy] BMC bioinformatics, Vol. 9 (23 January 2008), 34. by Patrick D. Schloss, Jo Handelsman posted to db diversity metagenomics rna by djkt on 2008-07-24 18:51:25 as along with 11 people and 4 groups orzenil taylor73 idoerg jonathaneisen skembel druvus jmeppley Thaverkamp alexisfjdufresne mjetten bluto Microbial-Ecology anammox microbiology_nijmegen iSEEM
	Evaluating different approaches that test whether microbial communities have the same structure [My Copy] ISME J, Vol. 2, No. 3. (31 January 2008), pp. 265-275. by Patrick D. Schloss posted to diversity metagenomics review by djkt on 2008-07-24 18:50:14 as along with 5 people and 2 groups hexaquo taylor73 jonathaneisen skembel sconlan Waikato - Erebus iSEEM
	An application of statistics to comparative metagenomics. [My Copy] BMC bioinformatics, Vol. 7, No. 1. (20 March 2006) by Beltran Rodriguez-Brito, Forest Rohwer, Robert A. Edwards posted to diversity metagenomics by djkt on 2008-07-24 18:48:39 as along with 7 people and 1 group taylor73 Thaverkamp jmeppley druvus knaseanka bluto carpi iSEEM
	$My PDF lozupone_06_unifrac.pdf$ UniFrac - An online tool for comparing microbial community diversity in a phylogenetic context [My Copy] BMC Bioinformatics, Vol. 7 (07 August 2006), 371. by Catherine Lozupone, Micah Hamady, Rob Knight posted to diversity metagenomics phylogenetics by djkt on 2008-07-24 18:45:57 as along with 3 people and 1 group esyoun skembel mcox iSEEM
	Phylogenetic Approaches for Describing and Comparing the Diversity of Microbial Communities [My Copy] Appl. Environ. Microbiol., Vol. 68, No. 8. (1 August 2002), pp. 3673-3682. by Andrew P. Martin posted to diversity metagenomics phylogenetics by djkt on 2008-07-24 18:45:14 as along with 7 people and 2 groups sharpton skembel sriesenfeld jmeppley Thaverkamp mcox Olaf_Ilzins Microbial-Ecology iSEEM
	Testing for Differentiation of Microbial Communities Using Phylogenetic Methods: Accounting for Uncertainty of Phylogenetic Inference and Character State Mapping [My Copy] Microbial Ecology, Vol. 52, No. 3. (October 2006), pp. 408-417. by Jones, Ryan, Martin, Andrew posted to diversity metagenomics phylogenetics by djkt on 2008-07-24 18:44:28 as along with 1 person and 1 group skembel iSEEM
	Introducing TreeClimber, a test to compare microbial community structures. [My Copy] Applied and environmental microbiology, Vol. 72, No. 4. (April 2006), pp. 2379-2384. by P. D. Schloss, J. Handelsman posted to diversity metagenomics phylogenetics by djkt on 2008-07-24 18:42:35 as along with 2 people and 1 group esyoun mcox iSEEM
	Quantitative comparisons of 16S rRNA gene sequence libraries from environmental samples. [My Copy] Applied and environmental microbiology, Vol. 67, No. 9. (September 2001), pp. 4374-4376. by D. R. Singleton, M. A. Furlong, S. L. Rathbun, W. B. Whitman posted to diversity ecology metagenomics rna by djkt on 2008-07-24 18:41:42 as along with 1 person and 1 group mcox iSEEM
	Integration of Microbial Ecology and Statistics: a Test To Compare Gene Libraries [My Copy] Appl. Environ. Microbiol., Vol. 70, No. 9. (1 September 2004), pp. 5485-5492. by Patrick D. Schloss, Bret R. Larget, Jo Handelsman posted to diversity ecology metagenomics microbes by djkt on 2008-07-24 18:39:36 as along with 2 people and 1 group jmeppley mcox iSEEM
	Introducing SONS, a tool for operational taxonomic unit-based comparisons of microbial community memberships and structures. [My Copy] Applied and environmental microbiology, Vol. 72, No. 10. (October 2006), pp. 6773-6779. by P. D. Schloss, J. Handelsman posted to diversity metagenomics phylogenetics by djkt on 2008-07-24 18:30:20 as along with 1 person and 1 group sconlan iSEEM
	Counting the Uncountable: Statistical Approaches to Estimating Microbial Diversity [My Copy] Appl. Environ. Microbiol., Vol. 67, No. 10. (1 October 2001), pp. 4399-4406. by Jennifer B. Hughes, Jessica J. Hellmann, Taylor H. Ricketts, Brendan J. Bohannan posted to diversity metagenomics review by djkt on 2008-07-24 18:27:30 as along with 6 people and 2 groups jmeppley Stenuite andrewirwin vrich mcox Olaf_Ilzins Biological oceanography iSEEM
	Introducing DOTUR, a computer program for defining operational taxonomic units and estimating species richness. [My Copy] Applied and environmental microbiology, Vol. 71, No. 3. (March 2005), pp. 1501-1506. by P. D. Schloss, J. Handelsman posted to diversity metagenomics by djkt on 2008-07-24 18:21:56 as along with 4 people and 1 group idoerg melissa_wos mcox sconlan iSEEM

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evolution	390
expression	248
popgen	213
selection	125
snps	125
proteins	113
human	107
metagenomics	106
microbes	101
sequencing	95
tf	95
phylogenetics	85
duplication	83
rna	83
primates	82
association	75
review	69
fly	63
msa	59
conservation	58
acceleration	57
chromatin	54
epigenetics	53
sv	51
recombination	49
qtl	46
yeast	46
indel	43
arrays	42
ecology	40
development	38
annotation	37
chromosome	36
alignment	35
diversity	34
motif	33
genome	31
mtp	31
prediction	31
rodents	31
mammals	29
repeats	26
testing	26
disease	24
divergence	23
chip-chip	21
histone	21
mutation	21
splicing	21
demography	20
variation	20
sysbio	19
molclock	18
simulation	18
virus	18
methylation	17
bgc	16
admixture	15
bayesian	15
imprinting	15
bias	14
microbiome	14
speciation	14
clustering	13
estimation	13
gccontent	13
nucleosome	13
db	12
genotyping	12
hmm	11
intron	11
assembly	10
cpg	10
enhancer	10
sex	10
stemcells	10
cancer	9
domestication	9
hiv	9
migration	9
model_selection	9
promoter	9
structure	9
design	8
environment	8
haplotype	8
isochores	7
resampling	7
bacteria	6
community	6
dog	6
geography	6
lactation	6
replication	6
schizophrenia	6
ancient_dna	5
brain	5
computing	5
immunity	4
model	4
pathogen	4
power	4
reconstruction	4
worm	4
bioinfo	3
drift	3
foxp2	3
gene-transfer	3
go	3
neanderthal	3
pax6	3
plants	3
synteny	3
vertebrates	3
viualization	3
acertainment	2
aging	2
cardiovascular	2
classification	2
coalescent	2
correlation	2
diet	2
epistasis	2
ethics	2
fish	2
heterochromatin	2
kmer	2
mixture	2
network	2
novel	2
signalling	2
species_abundance	2
theory	2
ultras	2
archaea	1
archeology	1
birds	1
centromeres	1
codon	1
ctcf	1
dimension_reduction	1
dna	1
enzymes	1
epidemiology	1
eukaryotes	1
forensics	1
gene_therapy	1
genome_size	1
heart	1
lactase	1
lineage_sorting	1
localization	1
lrt	1
metabolism	1
metabolomics	1
microsatellite	1
mirna	1
olfaction	1
pca	1
phosphorylation	1
placenta	1
ptmass	1
reelin	1
repeated_measures	1
svd	1
teaching	1
teeth	1
transgenic	1
utr	1
vision	1
workflow	1

djkt's diversity [34 articles] Export

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