djkt's mtp [31 articles] Export

Recent papers added to djkt's library classified by the tag mtp. You can also see everyone's mtp.

	Multiple testing in genome-wide association studies via hidden Markov models [My Copy] Bioinformatics, Vol. 25, No. 21. (1 November 2009), pp. 2802-2808. by Zhi Wei, Wenguang Sun, Kai Wang, Hakon Hakonarson posted to testing snps mtp hmm association by djkt on 2009-10-23 23:54:18 as along with 6 people and 1 group ppgardne WJWilson rdiaz pkonings jmeppley guhjy Journal picks
	Rotation Testing in Gene Set Enrichment Analysis for Small Direct Comparison Experiments [My Copy] SAGMB, Vol. 8, No. 1., article 34. by Guro Dørum, Lars Snipen, Margrete Solheim, Solve Sæbø posted to testing mtp by djkt on 2009-09-23 17:05:08 as
	Sample size calculations for controlling the distribution of false discovery proportion in microarray experiments [My Copy] Biostat, Vol. 10, No. 4. (1 October 2009), pp. 694-705. by Tomonori Oura, Shigeyuki Matsui, Koji Kawakami posted to mtp by djkt on 2009-09-11 19:58:40 as along with 2 people rdiaz renatomilani
	A new multitest correction (SGoF) that increases its statistical power when increasing the number of tests. [My Copy] BMC bioinformatics, Vol. 10, No. 1. (8 July 2009), 209. by Antonio Carvajal-Rodríguez, Jacobo de Uña-Alvarez, Emilio Rolán-Alvarez posted to mtp by djkt on 2009-07-10 00:31:04 as along with 8 people olberd natstreet guhjy druvus joaocarrico barriot humburg jmeppley
	Estimating the posterior probability that genome-wide association findings are true or false [My Copy] Bioinformatics, Vol. 25, No. 14. (15 July 2009), pp. 1807-1813. by Jozsef Bukszar, Joseph L. McClay, Edwin J. C. G. van den Oord posted to association bayesian mtp by djkt on 2009-07-02 19:22:48 as along with 3 people zufar nklee guhjy
	Large-scale multiple testing under dependence [My Copy] Journal of the Royal Statistical Society: Series B (Statistical Methodology), Vol. 71, No. 2., pp. 393-424. by Wenguang Sun, Tony posted to mtp testing by djkt on 2009-05-11 17:36:14 as
	Control of the false discovery rate under dependence using the bootstrap and subsampling [My Copy] TEST by Joseph Romano, Azeem Shaikh, Michael Wolf posted to mtp by djkt on 2008-12-17 17:07:44 as along with 1 person renreff
	Poisson Approximation for Significance in Genome-wide ChIP-chip Tiling Arrays [My Copy] Bioinformatics (25 October 2008), btn549. by Yu Zhang posted to arrays chip-chip mtp by djkt on 2008-10-27 16:11:56 as along with 4 people and 2 groups jfr Stew ghattem behindtherabbit Bioinformatics - CRUK SIMR bioinformatics
	Efficient p-value estimation in massively parallel testing problems [My Copy] Biostat, Vol. 9, No. 4. (1 October 2008), pp. 601-612. by Rafal Kustra, Xiaofei Shi, Duncan J. Murdoch, Celia M. T. Greenwood, Jagadish Rangrej posted to mtp by djkt on 2008-09-17 16:19:23 as along with 3 people ipark-kaist jfr guhjy
	Considering dependence among genes and markers for false discovery control in eQTL mapping. [My Copy] Bioinformatics (Oxford, England), Vol. 24, No. 18. (15 September 2008), pp. 2015-2022. by L. Chen, T. Tong, H. Zhao posted to expression mtp qtl by djkt on 2008-09-05 19:01:47 as along with 3 people caseybrown guhjy orzenil
	A Weighted-Holm Procedure accounting for allele frequencies in Genome-Wide Association Studies [My Copy] Genetics (24 August 2008), genetics.108.089839. by Cyril Dalmasso, Emmanuelle Genin, David-Alexandre Tregouet posted to mtp association popgen by djkt on 2008-09-01 19:59:34 as
	On correcting the overestimation of the permutation based false discovery rate estimator. [My Copy] Bioinformatics (Oxford, England) (23 June 2008) by Shuo Jiao, Shunpu Zhang posted to mtp by djkt on 2008-07-19 17:16:56 as along with 3 people jfr shigepong guhjy
	Evaluating Statistical Methods Using Plasmode Data Sets in the Age of Massive Public Databases: An Illustration Using False Discovery Rates [My Copy] PLoS Genet, Vol. 4, No. 6. (20 June 2008), e1000098. by Gary L. Gadbury, Qinfang Xiang, Lin Yang, Stephen Barnes, Grier P. Page, David B. Allison posted to mtp by djkt on 2008-06-21 01:13:25 as along with 3 people jfr guhjy nuin
	Significance levels for studies with correlated test statistics. [My Copy] Biostatistics (18 December 2007) by Jianxin Shi, Douglas F F. Levinson, Alice S S. Whittemore posted to mtp by djkt on 2008-06-18 18:42:13 as along with 2 people jfr guhjy
	Hierarchical False Discovery RateControlling Methodology [My Copy] Journal of the American Statistical Association, Vol. 103, No. 481. (March 2008), pp. 309-316. by Yekutieli, Daniel posted to mtp by djkt on 2008-03-31 20:47:29 as
	A Uniform Improvement of Bonferroni-Type Tests by Sequential Tests [My Copy] Journal of the American Statistical Association, Vol. 103, No. 481. (March 2008), pp. 299-308. by Posch, Martin, Futschik, Andreas posted to mtp by djkt on 2008-03-31 20:46:49 as
	Bayesian models based on test statistics for multiple hypothesis testing problems. [My Copy] Bioinformatics (1 February 2008) by Yuan Ji, Yiling Lu, Gordon B B. Mills posted to mtp by djkt on 2008-03-27 16:41:58 as along with 8 people guhjy jfr shigepong GeeSharpMinor bertelsen mailund maralena craigwilson06
	Multiple testing on the directed acyclic graph of gene ontology [My Copy] Bioinformatics, Vol. 24, No. 4. (15 February 2008), pp. 537-544. by Jelle J. Goeman, Ulrich Mansmann posted to annotation mtp by djkt on 2008-02-13 16:51:35 as along with 9 people Zephyrus bertelsen pkonings guhjy jfr eckart_bindewald barriot seemu carlk
	Naive Application of Permutation Testing Leads to Inflated Type I Error Rates [My Copy] Genetics, Vol. 178, No. 1. (1 January 2008), pp. 609-610. by G. A. Churchill, R. W. Doerge posted to mtp resampling by djkt on 2008-01-18 01:49:55 as along with 1 person laral
	To How Many Simultaneous Hypothesis Tests Can Normal, Student's t or Bootstrap Calibration Be Applied? [My Copy] Journal of the American Statistical Association, Vol. 102, No. 480. (December 2007), pp. 1282-1288. by Fan, Jianqing, Hall, Peter, Yao, Qiwei posted to mtp by djkt on 2008-01-10 00:11:15 as
	False Discovery Rates for Spatial Signals [My Copy] Journal of the American Statistical Association, Vol. 102, No. 480. (December 2007), pp. 1272-1281. by Benjamini, Yoav, Heller, Ruth posted to mtp by djkt on 2008-01-10 00:10:16 as
	Controlling the false discovery rate - a practical and powerful approach to multiple testing [My Copy] Journal of the Royal Statistical Society B, Vol. 57 (1995), pp. 289-300. by Y. Benjamini, Y. Hochberg posted to mtp by djkt on 2006-08-04 01:27:40 as
	Augmentation Procedures for Control of the Generalized Family-Wise Error Rate and Tail Probabilities for the Proportion of False Positives [My Copy] Statistical Applications in Genetics and Molecular Biolog, Vol. 3, No. 1. (2004), article 15. by M. J. van der Laan, S. Dudoit, K. S. Pollard posted to mtp resampling by djkt on 2006-08-04 00:31:30 as
	Multiple Testing Part II. Step-Down Procedures for Control of the Family-Wise Error Rate [My Copy] Statistical Applications in Genetics and Molecular Biology, Vol. 3, No. 1. (2004), article 14. by M. J. van der Laan, S. Dudoit, K. S. Pollard posted to mtp resampling by djkt on 2006-08-04 00:29:32 as
	Multiple Testing Part I. Single-step procedures for control of general type I error rates [My Copy] Statistical Applications in Genetics and Molecular Biology, Vol. 3, No. 1. (2004), article 13. by S. Dudoit, M. J. van der Laan, K. S. Pollard posted to mtp resampling by djkt on 2006-08-04 00:27:11 as
	Testing statistical hypotheses [My Copy] In Testing statistical hypotheses (1986) by E. L. Lehmann posted to mtp by djkt on 2006-08-04 00:24:04 as
	Multiple testing methods for ChIP-Chip high density oligonucleotide array data [My Copy] Journal of Computational Biology, Vol. 13, No. 3., pp. 579-613. by S. Keles, Mj van der Laan, S. Dudoit, Se Cawley posted to arrays chip-chip mtp by djkt on 2006-08-03 23:00:24 as
	A tail strength measure for assessing the overall univariate significance in a dataset [My Copy] Biostatistics, Vol. 7, No. 2. (April 2006), pp. 167-181. by Taylor, Jonathan, Tibshirani, Robert posted to mtp by djkt on 2006-08-03 22:49:28 as along with 1 person jfr
	Construction of null statistics in permutation-based multiple testing for multi-factorial microarray experiments [My Copy] Bioinformatics, Vol. 22, No. 12. (15 June 2006), pp. 1486-1494. by Xin Gao posted to mtp resampling by djkt on 2006-08-03 22:48:25 as along with 1 person shikin
	Multidimensional local false discovery rate for microarray studies [My Copy] Bioinformatics, Vol. 22, No. 5. (1 March 2006), pp. 556-565. by Alexander Ploner, Stefano Calza, Arief Gusnanto, Yudi Pawitan posted to mtp by djkt on 2006-08-03 22:46:55 as along with 2 people guhjy shigepong
	Quantile-Function Based Null Distribution in Resampling Based Multiple Testing [My Copy] Statistical Applications in Genetics and Molecular Biolog, Vol. 5, No. 1. (2006), article 14. by Mark J. van der Laan, Alan E. Hubbard posted to mtp resampling by djkt on 2006-08-03 22:43:02 as

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evolution	393
expression	262
popgen	218
selection	130
snps	128
proteins	117
human	116
metagenomics	108
microbes	107
tf	100
sequencing	99
phylogenetics	87
rna	86
duplication	85
primates	84
association	75
review	70
fly	66
conservation	64
msa	59
acceleration	57
chromatin	57
epigenetics	56
sv	52
recombination	52
yeast	48
qtl	46
indel	44
arrays	44
ecology	41
development	39
motif	39
annotation	37
chromosome	37
alignment	35
diversity	34
rodents	32
prediction	32
genome	31
mtp	31
mammals	30
testing	27
repeats	27
disease	25
divergence	25
demography	24
splicing	23
histone	23
chip-chip	21
mutation	21
sysbio	20
variation	20
methylation	19
simulation	18
virus	18
molclock	18
admixture	17
imprinting	16
bgc	16
bias	15
microbiome	15
bayesian	15
speciation	15
estimation	14
clustering	13
gccontent	13
nucleosome	13
stemcells	13
db	12
genotyping	12
intron	11
enhancer	11
hmm	11
assembly	11
domestication	10
hiv	10
sex	10
migration	10
cpg	10
structure	10
cancer	9
promoter	9
model_selection	9
environment	8
design	8
haplotype	8
dog	7
resampling	7
community	7
isochores	7
brain	6
schizophrenia	6
replication	6
bacteria	6
lactation	6
geography	6
computing	5
worm	5
ancient_dna	5
foxp2	5
power	4
model	4
reconstruction	4
immunity	4
kmer	4
pathogen	4
bioinfo	3
go	3
synteny	3
correlation	3
plants	3
pax6	3
viualization	3
ctcf	3
drift	3
gene-transfer	3
neanderthal	3
vertebrates	3
diet	3
theory	3
coalescent	2
ultras	2
signalling	2
fish	2
heterochromatin	2
cardiovascular	2
metabolomics	2
network	2
classification	2
species_abundance	2
ethics	2
mixture	2
acertainment	2
novel	2
epistasis	2
aging	2
epidemiology	1
vision	1
workflow	1
distribution	1
lineage_sorting	1
svd	1
transgenic	1
dimension_reduction	1
pca	1
birds	1
mirna	1
centromeres	1
meiosis	1
archaea	1
genome_size	1
enzymes	1
teaching	1
roc	1
teeth	1
lrt	1
phosphorylation	1
localization	1
proteomics	1
heart	1
utr	1
operons	1
gene_therapy	1
metabolism	1
microsatellite	1
repeated_measures	1
eukaryotes	1
reelin	1
placenta	1
lactase	1
olfaction	1
codon	1
archeology	1
ptmass	1
dna	1
forensics	1

djkt's mtp [31 articles] Export

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