djkt's repeats [27 articles] Export

Recent papers added to djkt's library classified by the tag repeats. You can also see everyone's repeats.

	Global Microsatellite Content Distinguishes Humans, Primates, Animals, and Plants [My Copy] Mol Biol Evol, Vol. 26, No. 12. (1 December 2009), pp. 2809-2819. by C. L. Galindo, L. J. McIver, J. F. McCormick, et al.M. A. Skinner, Y. Xie, R. A. Gelhausen, K. Ng, N. M. Kumar, H. R. Garner posted to repeats phylogenetics kmer arrays by djkt on 2009-11-11 00:45:24 as
	A Novel Mechanism of Transposon-Mediated Gene Activation [My Copy] PLoS Genet, Vol. 5, No. 10. (16 October 2009), e1000689. by Zhongge Zhang, Milton H. Saier posted to repeats expression by djkt on 2009-11-02 19:02:57 as along with 1 person and 1 group maren iSEEM
	Progressive GAA·TTC Repeat Expansion in Human Cell Lines [My Copy] PLoS Genet, Vol. 5, No. 10. (30 October 2009), e1000704. by Scott Ditch, Mimi C. Sammarco, Ayan Banerjee, Ed Grabczyk posted to repeats disease by djkt on 2009-11-02 17:40:49 as
	Unexpected consequences of a sudden and massive transposon amplification on rice gene expression [My Copy] Nature, Vol. 461, No. 7267. (22 October 2009), pp. 1130-1134. by Ken Naito, Feng Zhang, Takuji Tsukiyama, et al.Hiroki Saito, C. Nathan Hancock, Aaron O. Richardson, Yutaka Okumoto, Takatoshi Tanisaka, Susan R. Wessler posted to repeats plants expression by djkt on 2009-10-21 22:20:34 as along with 3 people operon fenghezi bpcusack
	A transposon-induced epigenetic change leads to sex determination in melon [My Copy] Nature, Vol. 461, No. 7267. (22 October 2009), pp. 1135-1138. by Antoine Martin, Christelle Troadec, Adnane Boualem, et al.Mazen Rajab, Ronan Fernandez, Halima Morin, Michel Pitrat, Catherine Dogimont, Abdelhafid Bendahmane posted to sex repeats promoter plants expression epigenetics by djkt on 2009-10-21 22:14:59 as along with 2 people maren gderwin
	Processed pseudogenes: the ‘fossilized footprints’ of past gene expression [My Copy] Trends in Genetics, Vol. 25, No. 10. (30 October 2009), pp. 429-434. by Ondrej Podlaha, Jianzhi Zhang posted to rodents repeats reconstruction expression evolution development by djkt on 2009-10-21 18:49:04 as
	Many LINE1 elements contribute to the transcriptome of human somatic cells [My Copy] Genome Biology, Vol. 10, No. 9. (2009), R100. by Sanjida Rangwala, Lili Zhang, Haig Kazazian posted to repeats expression by djkt on 2009-10-03 00:16:17 as along with 2 people operon natalia_martins
	The Evolutionary Origin of Man Can Be Traced in the Layers of Defunct Ancestral Alpha Satellites Flanking the Active Centromeres of Human Chromosomes [My Copy] PLoS Genet, Vol. 5, No. 9. (11 September 2009), e1000641. by Valery A. Shepelev, Alexander A. Alexandrov, Yuri B. Yurov, Ivan A. Alexandrov posted to repeats phylogenetics evolution chromosome centromeres by djkt on 2009-09-11 16:40:15 as along with 2 people and 1 group mspivako marywaye Journal picks
	L1 retrotransposition in human neural progenitor cells [My Copy] Nature, Vol. 460, No. 7259. (05 August 2009), pp. 1127-1131. by Nicole G. Coufal, Jose L. Garcia-Perez, Grace E. Peng, et al.Gene W. Yeo, Yangling Mu, Michael T. Lovci, Maria Morell, K. Sue OâShea, John V. Moran, Fred H. Gage posted to stemcells repeats development by djkt on 2009-09-11 16:02:11 as along with 5 people and 1 group fenghezi gangcai biomcgary pkonings rschulz Journal picks
	Mobile elements create structural variation: Analysis of a complete human genome [My Copy] Genome Research, Vol. 19, No. 9. (13 September 2009), pp. 1516-1526. by Jinchuan Xing, Yuhua Zhang, Kyudong Han, et al.Abdel H. Salem, Shurjo K. Sen, Chad D. Huff, Qiong Zhou, Ewen F. Kirkness, Samuel Levy, Mark A. Batzer, Lynn B. Jorde posted to sv repeats indel human by djkt on 2009-09-02 23:32:04 as along with 10 people and 1 group operon n00c sameersoi APRegier dchughes fenghezi jandot Dulcinea natstreet JustinCrocker Journal picks
	Dynamics of transposable elements: towards a community ecology of the genome [My Copy] Trends in Genetics, Vol. 25, No. 7. (18 July 2009), pp. 317-323. by Samuel Venner, Cédric Feschotte, Christian Biémont posted to ecology repeats by djkt on 2009-07-13 17:09:56 as along with 3 people and 1 group timflutre diamantis skembel iSEEM
	A hidden reservoir of integrative elements is the major source of recently acquired foreign genes and ORFans in archaeal and bacterial genomes [My Copy] Genome Biology, Vol. 10, No. 6. (2009), R65. by Diego Cortez, Patrick Forterre, Simonetta Gribaldo posted to evolution repeats virus by djkt on 2009-07-02 01:08:55 as along with 2 people and 1 group barriot neils iSEEM
	mRNA Retrotransposition Coupled with 5' Inversion as a Possible Source of New Genes [My Copy] Mol Biol Evol, Vol. 26, No. 6. (1 June 2009), pp. 1405-1420. by Kenji K. Kojima, Norihiro Okada posted to duplication proteins repeats by djkt on 2009-05-12 21:27:25 as along with 4 people operon dchughes bpcusack clearbluespring
	Rapid repetitive element-mediated expansion of piRNA clusters in mammalian evolution [My Copy] Proceedings of the National Academy of Sciences, Vol. 106, No. 17. (28 April 2009), pp. 7079-7082. by Raquel Assis, Alexey S. Kondrashov posted to duplication mammals repeats rna selection by djkt on 2009-05-11 17:40:38 as along with 5 people and 1 group tonamswish gdb leemond31 stajich bpcusack Mycology
	Comparative analysis of Alu repeats in primate genomes [My Copy] Genome Research, Vol. 19, No. 5. (May 2009), pp. 876-885. by George E. Liu, Can Alkan, Lu Jiang, Shaying Zhao, Evan E. Eichler posted to evolution phylogenetics primates repeats by djkt on 2009-05-02 02:51:15 as
	Revealing the History of Sheep Domestication Using Retrovirus Integrations [My Copy] Science, Vol. 324, No. 5926. (24 April 2009), pp. 532-536. by Bernardo Chessa, Filipe Pereira, Frederick Arnaud, et al.Antonio Amorim, Felix Goyache, Ingrid Mainland, Rowland R. Kao, Josephine M. Pemberton, Dario Beraldi, Michael J. Stear, Alberto Alberti, Marco Pittau, Leopoldo Iannuzzi, Mohammad H. Banabazi, Rudovick R. Kazwala, Ya-Ping Zhang, Juan J. Arranz, Bahy A. Ali, Zhiliang Wang, Metehan Uzun, Michel M. Dione, Ingrid Olsaker, Lars-Erik Holm, Urmas Saarma, Sohail Ahmad, Nurbiy Marzanov, Emma Eythorsdottir, Martin J. Holland, Paolo Ajmone-Marsan, Michael W. Bruford, Juha Kantanen, Thomas E. Spencer, Massimo Palmarini posted to domestication popgen repeats virus by djkt on 2009-04-24 19:50:44 as along with 1 person Schmidtc
	Haplotypic Background of a Private Allele at High Frequency in the Americas [My Copy] Mol Biol Evol, Vol. 26, No. 5. (1 May 2009), pp. 995-1016. by Kari B. Schroeder, Mattias Jakobsson, Michael H. Crawford, et al.Theodore G. Schurr, Simina M. Boca, Donald F. Conrad, Raul Y. Tito, Ludmilla P. Osipova, Larissa A. Tarskaia, Sergey I. Zhadanov, Jeffrey D. Wall, Jonathan K. Pritchard, Ripan S. Malhi, David G. Smith, Noah A. Rosenberg posted to admixture haplotype human migration popgen repeats by djkt on 2009-04-14 17:41:45 as
	Death and Resurrection of the Human <italic>IRGM</italic> Gene [My Copy] PLoS Genet, Vol. 5, No. 3. (6 March 2009), e1000403. by Cemalettin Bekpen, Tomas Marques-Bonet, Can Alkan, et al.Francesca Antonacci, Maria B. Leogrande, Mario Ventura, Jeffrey M. Kidd, Priscillia Siswara, Jonathan C. Howard, Evan E. Eichler posted to evolution primates proteins repeats by djkt on 2009-03-06 19:35:32 as along with 4 people memerman aprasad fenghezi bpcusack
	Origin of Primate Orphan Genes: A Comparative Genomics Approach [My Copy] Mol Biol Evol, Vol. 26, No. 3. (1 March 2009), pp. 603-612. by Macarena Toll-Riera, Nina Bosch, Nicolas Bellora, et al.Robert Castelo, Lluis Armengol, Xavier Estivill, M. Mar Alba posted to evolution primates proteins repeats by djkt on 2009-02-13 17:20:09 as along with 2 people operon nuin
	Analysis of the platypus genome suggests a transposon origin for mammalian imprinting [My Copy] Genome Biology, Vol. 10 (02 January 2009), R1. by Andrew, Marilyn B. Renfree posted to evolution imprinting repeats by djkt on 2009-02-03 02:14:43 as along with 5 people and 1 group inesdesantiago bpcusack epigenetics rschulz PaulFlook Imprinting
	The Relationship Between Microsatellite Polymorphism and Recombination Hot Spots in the Human Genome [My Copy] Mol Biol Evol, Vol. 25, No. 12. (1 December 2008), pp. 2579-2587. by Mikael Brandstrom, Andrew T. Bagshaw, Neil J. Gemmell, Hans Ellegren posted to evolution human popgen recombination repeats by djkt on 2008-11-15 00:35:05 as along with 1 person gbloeb
	CTCF cis-regulates trinucleotide repeat instability in an epigenetic manner: a novel basis for mutational hot spot determination. [My Copy] PLoS genetics, Vol. 4, No. 11. (14 November 2008), e1000257. by R. T. Libby, K. A. Hagerman, V. V. Pineda, et al.R. Lau, D. H. Cho, S. L. Baccam, M. M. Axford, J. D. Cleary, J. M. Moore, B. L. Sopher, S. J. Tapscott, G. N. Filippova, C. E. Pearson, A. R. La Spada posted to ctcf epigenetics mutation repeats by djkt on 2008-11-15 00:29:39 as along with 1 person sebastien_vigneau
	Evolution of the mammalian transcription factor binding repertoire via transposable elements [My Copy] Genome Research, Vol. 18, No. 11., 1752. by Bourque posted to chip-chip conservation evolution repeats tf by djkt on 2008-10-30 17:54:51 as
	High Rate of Recent Transposable Element–Induced Adaptation in Drosophila melanogaster [My Copy] PLoS Biology, Vol. 6, No. 10. (1 October 2008), e251. by Josefa González, Kapa Lenkov, Mikhail Lipatov, Michael J. Macpherson, Dmitri A. Petrov posted to fly repeats selection by djkt on 2008-10-21 23:04:34 as along with 8 people and 2 groups gwallau operon alweber emptyhb Neeperando cabbagesofdoom biomcgary stajich LabDros Mycology
	Diverse Splicing Patterns of Exonized Alu Elements in Human Tissues [My Copy] PLoS Genet, Vol. 4, No. 10. (17 October 2008), e1000225. by Lan Lin, Shihao Shen, Anne Tye, et al.James J. Cai, Peng Jiang, Beverly L. Davidson, Yi Xing posted to evolution expression primates proteins repeats splicing by djkt on 2008-10-17 18:22:38 as
	Abundance and length of simple repeats in vertebrate genomes are determined by their structural properties [My Copy] Genome Res., Vol. 18, No. 10., 1545. by Bacolla posted to chromatin repeats by djkt on 2008-10-01 19:03:00 as
	Intronic Alus Influence Alternative Splicing [My Copy] PLoS Genet, Vol. 4, No. 9. (2008), e1000204. by Galit Lev-Maor, Oren Ram, Eddo Kim, et al.Noa Sela, Amir Goren, Erez Y. Levanon, Gil Ast posted to intron repeats splicing by djkt on 2008-09-26 19:08:34 as along with 3 people and 1 group operon noasela aprasad Computational-Genomics

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evolution	392
expression	262
popgen	217
selection	130
snps	127
proteins	117
human	114
metagenomics	107
microbes	106
tf	100
sequencing	97
phylogenetics	87
duplication	85
rna	85
primates	84
association	75
review	70
conservation	64
fly	64
msa	59
acceleration	57
chromatin	56
epigenetics	56
recombination	52
sv	52
yeast	48
qtl	46
indel	44
arrays	44
ecology	41
development	39
motif	39
annotation	37
chromosome	37
alignment	35
diversity	34
prediction	32
rodents	32
genome	31
mtp	31
mammals	30
repeats	27
testing	27
divergence	25
disease	24
splicing	23
histone	23
demography	23
mutation	21
chip-chip	21
sysbio	20
variation	20
methylation	19
molclock	18
simulation	18
virus	18
admixture	17
imprinting	16
bgc	16
microbiome	15
bayesian	15
estimation	14
bias	14
speciation	14
nucleosome	13
gccontent	13
stemcells	13
clustering	13
db	12
genotyping	12
hmm	11
enhancer	11
intron	11
assembly	11
hiv	10
domestication	10
sex	10
cpg	10
structure	10
cancer	9
promoter	9
migration	9
model_selection	9
environment	8
haplotype	8
design	8
isochores	7
community	7
resampling	7
dog	7
schizophrenia	6
brain	6
replication	6
lactation	6
bacteria	6
geography	6
computing	5
ancient_dna	5
foxp2	5
worm	5
immunity	4
power	4
reconstruction	4
pathogen	4
kmer	4
model	4
go	3
synteny	3
theory	3
gene-transfer	3
vertebrates	3
pax6	3
viualization	3
drift	3
ctcf	3
neanderthal	3
plants	3
bioinfo	3
correlation	3
coalescent	2
ultras	2
signalling	2
diet	2
fish	2
heterochromatin	2
cardiovascular	2
metabolomics	2
network	2
classification	2
species_abundance	2
ethics	2
mixture	2
acertainment	2
novel	2
epistasis	2
aging	2
epidemiology	1
vision	1
workflow	1
distribution	1
lineage_sorting	1
svd	1
transgenic	1
dimension_reduction	1
pca	1
birds	1
mirna	1
centromeres	1
meiosis	1
archaea	1
genome_size	1
enzymes	1
teaching	1
roc	1
teeth	1
lrt	1
phosphorylation	1
localization	1
proteomics	1
heart	1
utr	1
operons	1
gene_therapy	1
metabolism	1
microsatellite	1
repeated_measures	1
eukaryotes	1
reelin	1
placenta	1
lactase	1
olfaction	1
codon	1
archeology	1
ptmass	1
dna	1
forensics	1

djkt's repeats [27 articles] Export

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