djkt's sequencing [97 articles] Export

Recent papers added to djkt's library classified by the tag sequencing. You can also see everyone's sequencing.

	Identifiability of isoform deconvolution from junction arrays and RNA-Seq [My Copy] Bioinformatics, Vol. 25, No. 23. (1 December 2009), pp. 3056-3059. by David Hiller, Hui Jiang, Weihong Xu, Wing H. Wong posted to splicing sequencing expression arrays by djkt on 2009-11-17 17:36:03 as along with 5 people and 2 groups jwfoley hzoltan cajunsushi ghattem GeeSharpMinor Journal picks SIMR bioinformatics
	Benchmarking Next-Generation Transcriptome Sequencing for Functional and Evolutionary Genomics [My Copy] Mol Biol Evol, Vol. 26, No. 12. (1 December 2009), pp. 2731-2744. by John G. Gibbons, Eric M. Janson, Chris T. Hittinger, Mark Johnston, Patrick Abbot, Antonis Rokas posted to sequencing assembly by djkt on 2009-11-11 00:09:19 as along with 7 people and 1 group mlog kiekyon biomcgary GustavoLacerda stajich natstreet druvus Mycology
	Enrichment of sequencing targets from the human genome by solution hybridization [My Copy] Genome Biology, Vol. 10, No. 10. (16 October 2009), R116. by Ryan Tewhey, Masakazu Nakano, Xiaoyun Wang, et al.Carlos P. Pena, Barbara Novak, Angelica Giuffre, Eric Lin, Scott Happe, Doug Roberts, Emily LeProust, Eric Topol, Olivier Harismendy, Kelly Frazer posted to snps sequencing popgen by djkt on 2009-11-03 01:41:15 as along with 2 people pst seb1
	ALLPATHS 2: small genomes assembled accurately and with high continuity from short paired reads [My Copy] Genome Biology, Vol. 10, No. 10. (1 October 2009), R103. by Iain MacCallum, Dariusz Przybylski, Sante Gnerre, et al.Joshua Burton, Ilya Shlyakhter, Andreas Gnirke, Joel Malek, Kevin McKernan, Swati Ranade, Terrance Shea, Louise Williams, Sarah Young, Chad Nusbaum, David Jaffe posted to sequencing assembly by djkt on 2009-11-03 01:40:24 as along with 10 people and 1 group n00c azazello dakelley jgill GustavoLacerda ramonvidal justinhjohnson stajich druvus neils Mycology
	TagDust--a program to eliminate artifacts from next generation sequencing data [My Copy] Bioinformatics, Vol. 25, No. 21. (1 November 2009), pp. 2839-2840. by Timo Lassmann, Yoshihide Hayashizaki, Carsten O. Daub posted to sequencing by djkt on 2009-10-23 23:53:28 as along with 20 people and 1 group orzenil hzoltan chvlyl operon kshameer rtogawa seb1 idonaldson nuin debasis jgill GeeSharpMinor sotacam torfinnnome walshtp heliopais jandot n00c rschulz druvus Journal picks
	Updates to the RMAP short-read mapping software [My Copy] Bioinformatics, Vol. 25, No. 21. (1 November 2009), pp. 2841-2842. by Andrew D. Smith, Wen-Yu Chung, Emily Hodges, et al.Jude Kendall, Greg Hannon, James Hicks, Zhenyu Xuan, Michael Q. Zhang posted to sequencing by djkt on 2009-10-23 23:53:12 as along with 8 people and 1 group seb1 darian natstreet rtogawa idonaldson heliopais n00c druvus Journal picks
	Characterizing natural variation using next-generation sequencing technologies [My Copy] Trends in Genetics, Vol. 25, No. 10. (02 October 2009), pp. 463-471. by Yoav Gilad, Jonathan K. Pritchard, Kevin Thornton posted to sequencing review popgen by djkt on 2009-10-21 18:55:43 as along with 5 people and 1 group operon jwfoley skembel n00c natstreet iSEEM
	Genome evolution and adaptation in a long-term experiment with Escherichia coli. [My Copy] Nature, Vol. 461, No. 7268. (29 October 2009), pp. 1243-1247. by Jeffrey E. Barrick, Dong Su S. Yu, Sung Ho H. Yoon, et al.Haeyoung Jeong, Tae Kwang K. Oh, Dominique Schneider, Richard E. Lenski, Jihyun F. Kim posted to sequencing selection mutation molclock evolution bacteria by djkt on 2009-10-21 18:18:30 as along with 31 people and 5 groups pmalkus dokky samubernard ilyashl biomcgary kintoki zwang jasontsai aaltenburger sawasthi nurban josepe tjandra venancio maren qayub Garamonfok yyfwuhan Asclepius dbikard nzm jjray treangen lp2 codonusage operon diamantis michaelbarton druvus DrRichardBadge richardfranzese ronbun_2009au Pedro Martinez EvoDevo lab Barcelona iSEEM Journal picks BergmanLab
	Mutational evolution in a lobular breast tumour profiled at single nucleotide resolution. [My Copy] Nature, Vol. 461, No. 7265. (8 October 2009), pp. 809-813. by Sohrab P. Shah, Ryan D. Morin, Jaswinder Khattra, et al.Leah Prentice, Trevor Pugh, Angela Burleigh, Allen Delaney, Karen Gelmon, Ryan Guliany, Janine Senz, Christian Steidl, Robert A. Holt, Steven Jones, Mark Sun, Gillian Leung, Richard Moore, Tesa Severson, Greg A. Taylor, Andrew E. Teschendorff, Kane Tse, Gulisa Turashvili, Richard Varhol, René L. Warren, Peter Watson, Yongjun Zhao, Carlos Caldas, David Huntsman, Martin Hirst, Marco A. Marra, Samuel Aparicio posted to snps sequencing mutation cancer by djkt on 2009-10-07 21:23:23 as along with 13 people and 2 groups misonneh pst jwfoley stubrown chvlyl giovenko frohike brianb Zephyrus jsuchit mkiyer torfinnnome merpublic Chinnaiyan Lab Journal picks
	Direct RNA sequencing. [My Copy] Nature, Vol. 461, No. 7265. (8 October 2009), pp. 814-818. by Fatih Ozsolak, Adam R. Platt, Dan R. Jones, et al.Jeffrey G. Reifenberger, Lauryn E. Sass, Peter McInerney, John F. Thompson, Jayson Bowers, Mirna Jarosz, Patrice M. Milos posted to sequencing rna by djkt on 2009-10-07 21:21:34 as along with 20 people and 2 groups pmalkus hzoltan manduca gotgenes jwfoley GeeSharpMinor mlc39 colinveal reyez TRHvidsten ppgardne dchughes heliopais vingron nzm n00c lp2 toni_marco dswan kinestetika Journal picks Bioinformatics - CRUK
	Simultaneous alignment of short reads against multiple genomes [My Copy] Genome Biology, Vol. 10, No. 9. (17 September 2009), R98. by Korbinian Schneeberger, Jorg Hagmann, Stephan Ossowski, et al.Norman Warthmann, Sandra Gesing, Oliver Kohlbacher, Detlef Weigel posted to sequencing by djkt on 2009-10-03 00:15:56 as along with 12 people n00c seninp darian maren megraw fstrozzi jamselem justinhjohnson torfinnnome reyez natstreet druvus
	BayesCall: A model-based base-calling algorithm for high-throughput short-read sequencing [My Copy] Genome Research, Vol. 19, No. 10. (6 October 2009), pp. 1884-1895. by Wei-Chun Kao, Kristian Stevens, Yun S. Song posted to sequencing by djkt on 2009-10-01 23:56:24 as along with 13 people and 2 groups heliopais dakelley lp2 megraw rdiaz torfinnnome n00c farhat druvus polivares stajich fpattyn jbhiatt BergmanLab Mycology
	Personalized copy number and segmental duplication maps using next-generation sequencing. [My Copy] Nature genetics, Vol. 41, No. 10. (30 October 2009), pp. 1061-1067. by Can Alkan, Jeffrey M. Kidd, Tomas Marques-Bonet, et al.Gozde Aksay, Francesca Antonacci, Fereydoun Hormozdiari, Jacob O. Kitzman, Carl Baker, Maika Malig, Onur Mutlu, S. Cenk Sahinalp, Richard A. Gibbs, Evan E. Eichler posted to sv sequencing duplication by djkt on 2009-09-29 17:36:24 as along with 30 people and 1 group ongenetics chvlyl leemachado daed gbenson n00c bozdagd dakelley sbmontgomery eshirdel merpublic shyamsg scmelton qayub natstreet fenghezi Annab nuin xingxu jamesmorris rdiaz brant torfinnnome jandot pkonings danmaclean daforerog frohike rschulz gangcai Journal picks
	Upcoming challenges for multiple sequence alignment methods in the high-throughput era [My Copy] Bioinformatics, Vol. 25, No. 19. (1 October 2009), pp. 2455-2465. by Carsten Kemena, Cedric Notredame posted to sequencing review alignment by djkt on 2009-09-28 19:31:26 as along with 10 people and 2 groups fstrozzi manduca rdiaz sjcockell torfinnnome walshtp nuin natstreet druvus ollieredfernwork Journal picks Orengo Group Journal Picks
	ShortRead: a bioconductor package for input, quality assessment and exploration of high-throughput sequence data. [My Copy] Bioinformatics (Oxford, England), Vol. 25, No. 19. (1 October 2009), pp. 2607-2608. by Martin Morgan, Simon Anders, Michael Lawrence, Patrick Aboyoun, Hervé Pagès, Robert Gentleman posted to sequencing by djkt on 2009-09-28 19:24:53 as along with 13 people and 1 group darian jforment fstrozzi rschulz jmeppley dswan torfinnnome walshtp jamesmorris joaocarrico natstreet n00c druvus Bioinformatics Core Service
	PineSAP--sequence alignment and SNP identification pipeline [My Copy] Bioinformatics, Vol. 25, No. 19. (1 October 2009), pp. 2609-2610. by Jill L. Wegrzyn, Jennifer M. Lee, John Liechty, David B. Neale posted to snps sequencing alignment by djkt on 2009-09-28 19:23:25 as along with 7 people jasontsai jsatkosk daforerog operon nuin n00c druvus
	Fast mapping of short sequences with mismatches, insertions and deletions using index structures. [My Copy] PLoS computational biology, Vol. 5, No. 9. (11 September 2009), e1000502. by Steve Hoffmann, Christian Otto, Stefan Kurtz, et al.Cynthia M. Sharma, Philipp Khaitovich, Jörg Vogel, Peter F. Stadler, Jörg Hackermüller posted to sequencing indel alignment by djkt on 2009-09-11 16:27:56 as along with 19 people and 4 groups cthachuk hzoltan darian nuin fenghezi behindtherabbit jandot walshtp torfinnnome stubrown dswan polivares orzenil natstreet jmcq n00c heliopais ppgardne druvus Bioinformatics BergmanLab iSEEM Journal picks
	Targeted capture and massively parallel sequencing of 12 human exomes. [My Copy] Nature, Vol. 461, No. 7261. (10 September 2009), pp. 272-276. by Sarah B. Ng, Emily H. Turner, Peggy D. Robertson, et al.Steven D. Flygare, Abigail W. Bigham, Choli Lee, Tristan Shaffer, Michelle Wong, Arindam Bhattacharjee, Evan E. Eichler, Michael Bamshad, Deborah A. Nickerson, Jay Shendure posted to snps sequencing human genome expression disease association by djkt on 2009-09-09 20:28:18 as along with 23 people and 1 group seb1 hzoltan liqbbi chvlyl ongenetics psique fenghezi n00c dswan jmanning2k torfinnnome GeeSharpMinor pkonings neils daforerog PabloMarin stubrown danmaclean xingxu vplagnol druvus jandot frohike Journal picks
	Improved base calling for the Illumina Genome Analyzer using machine learning strategies [My Copy] Genome Biology, Vol. 10, No. 8. (14 August 2009), R83. by Martin Kircher, Udo Stenzel, Janet Kelso posted to sequencing by djkt on 2009-09-02 23:55:00 as along with 7 people and 1 group seb1 reyez fpattyn danmaclean ppgardne n00c druvus Journal picks
	The first Korean genome sequence and analysis: Full genome sequencing for a socio-ethnic group [My Copy] Genome Research, Vol. 19, No. 9. (24 September 2009), pp. 1622-1629. by Sung-Min Ahn, Tae-Hyung Kim, Sunghoon Lee, et al.Deokhoon Kim, Ho Ghang, Dae-Soo Kim, Byoung-Chul Kim, Sang-Yoon Kim, Woo-Yeon Kim, Chulhong Kim, Daeui Park, Yong S. Lee, Sangsoo Kim, Rohit Reja, Sungwoong Jho, Chang G. Kim, Ji-Young Cha, Kyung-Hee Kim, Bonghee Lee, Jong Bhak, Seong-Jin Kim posted to sv snps sequencing human genome by djkt on 2009-09-02 23:47:00 as along with 5 people and 1 group n00c ppgardne fenghezi jessopher daforerog Journal picks
	High definition profiling of mammalian DNA methylation by array capture and single molecule bisulfite sequencing [My Copy] Genome Research, Vol. 19, No. 9. (6 September 2009), pp. 1593-1605. by Emily Hodges, Andrew D. Smith, Jude Kendall, et al.Zhenyu Xuan, Kandasamy Ravi, Michelle Rooks, Michael Q. Zhang, Kenny Ye, Arindam Bhattacharjee, Leonardo Brizuela, W. Richard McCombie, Michael Wigler, Gregory J. Hannon, James B. Hicks posted to sequencing methylation cpg arrays by djkt on 2009-09-02 23:45:26 as along with 3 people inesdesantiago fenghezi ychang0918
	Multiplex padlock targeted sequencing reveals human hypermutable CpG variations [My Copy] Genome Research, Vol. 19, No. 9. (12 September 2009), pp. 1606-1615. by Jin B. Li, Yuan Gao, John Aach, et al.Kun Zhang, Gregory V. Kryukov, Bin Xie, Annika Ahlford, Jung-Ki Yoon, Abraham M. Rosenbaum, Alexander W. Zaranek, Emily Leproust, Shamil R. Sunyaev, George M. Church posted to snps sequencing cpg by djkt on 2009-09-02 23:44:03 as
	Sequence and structural variation in a human genome uncovered by short-read, massively parallel ligation sequencing using two-base encoding [My Copy] Genome Research, Vol. 19, No. 9. (22 September 2009), pp. 1527-1541. by Kevin J. McKernan, Heather E. Peckham, Gina L. Costa, et al.Stephen F. McLaughlin, Yutao Fu, Eric F. Tsung, Christopher R. Clouser, Cisyla Duncan, Jeffrey K. Ichikawa, Clarence C. Lee, Zheng Zhang, Swati S. Ranade, Eileen T. Dimalanta, Fiona C. Hyland, Tanya D. Sokolsky, Lei Zhang, Andrew Sheridan, Haoning Fu, Cynthia L. Hendrickson, Bin Li, Lev Kotler, Jeremy R. Stuart, Joel A. Malek, Jonathan M. Manning, Alena A. Antipova, Damon S. Perez, Michael P. Moore, Kathleen C. Hayashibara, Michael R. Lyons, Robert E. Beaudoin, Brittany E. Coleman, Michael W. Laptewicz, Adam E. Sannicandro, Michael D. Rhodes, Rajesh K. Gottimukkala, Shan Yang, Vineet Bafna, Ali Bashir, Andrew MacBride, Can Alkan, Jeffrey M. Kidd, Evan E. Eichler, Martin G. Reese, Francisco M. De La Vega, Alan P. Blanchard posted to sv snps sequencing human haplotype by djkt on 2009-09-02 23:34:01 as along with 17 people hzoltan gbenson adijr chrisamiller heliopais daforerog druvus psique sameersoi APRegier fenghezi jmanning2k xingxu pkonings n00c jandot natstreet
	PIQA: pipeline for Illumina G1 genome analyzer data quality assessment [My Copy] Bioinformatics, Vol. 25, No. 18. (15 September 2009), pp. 2438-2439. by A. Martinez-Alcantara, E. Ballesteros, C. Feng, et al.M. Rojas, H. Koshinsky, V. Y. Fofanov, P. Havlak, Y. Fofanov posted to sequencing by djkt on 2009-09-02 23:30:12 as along with 2 people guhjy n00c
	HI: haplotype improver using paired-end short reads. [My Copy] Bioinformatics (Oxford, England), Vol. 25, No. 18. (15 September 2009), pp. 2436-2437. by Quan Long, Daniel MacArthur, Zemin Ning, Chris Tyler-Smith posted to sequencing haplotype by djkt on 2009-09-02 23:29:26 as along with 5 people and 1 group PabloMarin pkonings natstreet guhjy jasontsai Journal picks
	SHREC: a short-read error correction method [My Copy] Bioinformatics, Vol. 25, No. 17. (1 September 2009), pp. 2157-2163. by Jan Schroder, Heiko Schroder, Simon J. Puglisi, Ranjan Sinha, Bertil Schmidt posted to sequencing by djkt on 2009-08-20 19:00:26 as along with 12 people and 1 group adthrasher dakelley skembel thegoose katholt sotacam rtogawa torfinnnome natstreet druvus n00c jmeppley Journal picks
	Swift: primary data analysis for the Illumina Solexa sequencing platform [My Copy] Bioinformatics, Vol. 25, No. 17. (1 September 2009), pp. 2194-2199. by Nava Whiteford, Tom Skelly, Christina Curtis, et al.Matt E. Ritchie, Andrea Lohr, Alexander W. Zaranek, Irina Abnizova, Clive Brown posted to sequencing by djkt on 2009-08-20 18:58:28 as along with 21 people and 4 groups heliopais hzoltan dakelley sotacam lh49 rtogawa cassj dswan torfinnnome rschulz natstreet druvus jasontsai jmeppley ghattem nuin polivares n00c aprasad niallhaslam idoerg Bioinformatics BergmanLab SIMR bioinformatics Journal picks
	A fast hybrid short read fragment assembly algorithm [My Copy] Bioinformatics, Vol. 25, No. 17. (1 September 2009), pp. 2279-2280. by Bertil Schmidt, Ranjan Sinha, Bryan Beresford-Smith, Simon J. Puglisi posted to sequencing assembly by djkt on 2009-08-20 18:57:48 as along with 16 people and 2 groups torfinnnome hzoltan cthachuk orzenil GustavoLacerda APRegier dakelley katholt GeeSharpMinor dayjm dswan pachorip natstreet druvus n00c jmeppley Bioinformatics Journal picks
	VarScan: variant detection in massively parallel sequencing of individual and pooled samples [My Copy] Bioinformatics, Vol. 25, No. 17. (1 September 2009), pp. 2283-2285. by Daniel C. Koboldt, Ken Chen, Todd Wylie, et al.David E. Larson, Michael D. McLellan, Elaine R. Mardis, George M. Weinstock, Richard K. Wilson, Li Ding posted to snps sequencing by djkt on 2009-08-20 18:56:25 as along with 15 people and 3 groups hzoltan Peiyong darian seb1 heliopais mkiyer dakelley PabloMarin guhjy n00c orzenil natstreet druvus stajich malcook Journal picks Mycology SIMR bioinformatics
	A highly annotated whole-genome sequence of a Korean individual [My Copy] Nature, Vol. advance online publication, No. 7258. (08 July 2009), pp. 1011-1015. by Jong-Il Kim, Young S. Ju, Hansoo Park, et al.Sheehyun Kim, Seonwook Lee, Jae-Hyuk Yi, Joann Mudge, Neil A. Miller, Dongwan Hong, Callum J. Bell, Hye-Sun Kim, In-Soon Chung, Woo-Chung Lee, Ji-Sun Lee, Seung-Hyun Seo, Ji-Young Yun, Hyun N. Woo, Heewook Lee, Dongwhan Suh, Seungbok Lee, Hyun-Jin Kim, Maryam Yavartanoo, Minhye Kwak, Ying Zheng, Mi K. Lee, Hyunjun Park, Jeong Y. Kim, Omer Gokcumen, Ryan E. Mills, Alexander W. Zaranek, Joseph Thakuria, Xiaodi Wu, Ryan W. Kim, Jim J. Huntley, Shujun Luo, Gary P. Schroth, Thomas D. Wu, HyeRan Kim, Kap-Seok Yang, Woong-Yang Park, Hyungtae Kim, George M. Church, Charles Lee, Stephen F. Kingsmore, Jeong-Sun Seo posted to sv snps sequencing genome by djkt on 2009-08-19 20:19:46 as along with 8 people and 1 group n00c fenghezi nicolesoranzo mtagaya reyez pkonings psique jbhiatt Journal picks
	Systematic artifacts in metagenomes from complex microbial communities [My Copy] ISME (July 2009) by V. Gomez-Alvarez, T. K. Teal, Schmidt Tm posted to bias metagenomics sequencing by djkt on 2009-08-07 21:44:22 as along with 1 group iSEEM
	Methods for analyzing deep sequencing expression data: constructing the human and mouse promoterome with deepCAGE data [My Copy] Genome Biology, Vol. 10, No. 7. (22 July 2009), R79. by Piotr Balwierz, Piero Carninci, Carsten Daub, et al.Jun Kawai, Yoshihide Hayashizaki, Werner Van Belle, Christian Beisel, Erik van Nimwegen posted to annotation expression promoter sequencing by djkt on 2009-07-27 18:52:22 as along with 7 people vingron orzenil ptrobajo maximilianh inesdesantiago guhjy dolchan
	SOAP2: an improved ultrafast tool for short read alignment [My Copy] Bioinformatics, Vol. 25, No. 15. (1 August 2009), pp. 1966-1967. by Ruiqiang Li, Chang Yu, Yingrui Li, et al.Tak-Wah Lam, Siu-Ming Yiu, Karsten Kristiansen, Jun Wang posted to alignment sequencing by djkt on 2009-07-18 00:49:41 as along with 26 people and 6 groups hzoltan agbiotec torfinnnome natstreet cthachuk jforment GustavoLacerda adijr bozdagd stubrown polivares guhjy ollieredfernwork operon cassj adamjamesreid Stew jamselem dswan idonaldson TRHvidsten humburg farhat n00c jmeppley druvus Bioinformatics Core Service BergmanLab Orengo Group Journal Picks Bioinformatics - CRUK Bioinformatics Journal picks
	A probabilistic approach for SNP discovery in high-throughput human resequencing data [My Copy] Genome Research, Vol. 19, No. 9. (15 September 2009), pp. 1542-1552. by Rose Hoberman, Joana Dias, Bing Ge, et al.Eef Harmsen, Michael Mayhew, Dominique J. Verlaan, Tony Kwan, Ken Dewar, Mathieu Blanchette, Tomi Pastinen posted to sequencing snps by djkt on 2009-07-16 00:10:00 as along with 7 people druvus sameersoi megraw guhjy n00c fenghezi natstreet
	Fast and accurate short read alignment with Burrows-Wheeler transform. [My Copy] Bioinformatics (Oxford, England), Vol. 25, No. 14. (15 July 2009), pp. 1754-1760. by Heng Li, Richard Durbin posted to alignment sequencing by djkt on 2009-07-02 19:23:19 as along with 33 people and 4 groups lianping hzoltan cthachuk maren bozdagd adijr heliopais jmanning2k GustavoLacerda stubrown jessopher guhjy katholt mkiyer jmcq idonaldson michaelbarton polivares darian orzenil cassj inesdesantiago TRHvidsten operon ghattem n00c danmaclean ppgardne nuin rschulz natstreet druvus humburg BergmanLab SIMR bioinformatics Bioinformatics Journal picks
	Efficient frequency-based de novo short-read clustering for error trimming in next-generation sequencing [My Copy] Genome Research, Vol. 19, No. 7. (4 July 2009), pp. 1309-1315. by Wei Qu, Shin-ichi Hashimoto, Shinichi Morishita posted to sequencing by djkt on 2009-07-01 22:23:36 as along with 8 people heliopais druvus n00c megraw nlapalu dakelley operon natstreet
	Combinatorial algorithms for structural variation detection in high-throughput sequenced genomes [My Copy] Genome Research, Vol. 19, No. 7. (15 July 2009), pp. 1270-1278. by Fereydoun Hormozdiari, Can Alkan, Evan E. Eichler, S. Cenk Sahinalp posted to evolution indel sequencing sv by djkt on 2009-07-01 22:21:57 as along with 17 people hzoltan n00c rdiaz aezrin jandot GustavoLacerda guhjy jessopher megraw jonilaserson chrisamiller dandaman sameersoi dakelley APRegier natstreet druvus
	Overlapping pools for high-throughput targeted resequencing [My Copy] Genome Research, Vol. 19, No. 7. (15 July 2009), pp. 1254-1261. by Snehit Prabhu, Itsik Pe'er posted to association popgen sequencing by djkt on 2009-07-01 22:11:49 as along with 13 people and 1 group hzoltan jandot guhjy pkonings jcbarret orzenil natstreet druvus n00c dandaman xingxu sameersoi jdbowes Journal picks
	DNA Sudoku--harnessing high-throughput sequencing for multiplexed specimen analysis. [My Copy] Genome research, Vol. 19, No. 7. (15 July 2009), pp. 1243-1253. by Yaniv Erlich, Kenneth Chang, Assaf Gordon, et al.Roy Ronen, Oron Navon, Michelle Rooks, Gregory J. Hannon posted to association popgen sequencing by djkt on 2009-07-01 22:11:10 as along with 19 people and 1 group hzoltan orzenil heliopais qayub jandot pkonings jcbarret nlapalu guhjy fenghezi dandaman xingxu ppgardne daforerog n00c rpatward jbhiatt natstreet samgj Journal picks
	Managing and analyzing next-generation sequence data. [My Copy] PLoS computational biology, Vol. 5, No. 6. (26 June 2009), e1000369. by Brent G. Richter, David P. Sexton posted to bioinfo review sequencing by djkt on 2009-06-27 02:45:25 as along with 41 people and 3 groups Geknitics cthachuk hzoltan chvlyl sameersoi hpaces gdv GeeSharpMinor idonaldson darian daveGerrard tharris Yanno inesdesantiago jcaddy agbiotec humburg Zephyrus daforerog stubrown GustavoLacerda torfinnnome natstreet polivares orzenil kongl guhjy druvus n00c leemond31 nuin operon jasontsai jmeppley rdiaz michaelbarton dswan reyez kshameer TRHvidsten ppgardne BergmanLab Bioinformatics Journal picks
	Estimates of Positive Darwinian Selection Are Inflated by Errors in Sequencing, Annotation, and Alignment [My Copy] Genome Biology and Evolution, Vol. 0 (2009), 114. by Schneider posted to alignment annotation selection sequencing by djkt on 2009-06-23 18:00:42 as
	A practical algorithm for finding maximal exact matches in large sequence datasets using sparse suffix arrays [My Copy] Bioinformatics, Vol. 25, No. 13. (1 July 2009), pp. 1609-1616. by Zia Khan, Joshua S. Bloom, Leonid Kruglyak, Mona Singh posted to alignment sequencing by djkt on 2009-06-17 21:59:49 as along with 2 people n00c guhjy
	Inferring population mutation rate and sequencing error rate using the SNP frequency spectrum in a sample of DNA sequences. [My Copy] Molecular biology and evolution (24 March 2009) by Xiaoming Liu, Taylor J J. Maxwell, Eric Boerwinkle, Yun-Xin X. Fu posted to popgen sequencing snps by djkt on 2009-06-09 19:01:28 as along with 4 people jsatkosk sameersoi jmeppley bpcusack
	SHRiMP: Accurate Mapping of Short Color-space Reads [My Copy] PLoS Comput Biol, Vol. 5, No. 5. (22 May 2009), e1000386. by Stephen M. Rumble, Phil Lacroute, Adrian V. Dalca, Marc Fiume, Arend Sidow, Michael Brudno posted to alignment sequencing by djkt on 2009-06-09 00:04:12 as along with 23 people and 4 groups Julien_Fayolle heliopais jfr cthachuk hzoltan bozdagd ilanc burak guhjy trfield n00c natstreet adijr druvus Stew farhat humburg kshameer operon stajich GeeSharpMinor AlexBateman barry Bioinformatics - CRUK Mycology Journal picks Bioinformatics
	Distinct DNA methylation patterns characterize differentiated human embryonic stem cells and developing human fetal liver [My Copy] Genome Research (1 January 2009) by Alayne L. Brunner, David S. Johnson, Si W. Kim, et al.Anton Valouev, Timothy E. Reddy, Norma F. Neff, Elizabeth Anton, Catherine Medina, Loan Nguyen, Eric Chiao, Chuba B. Oyolu, Gary P. Schroth, Devin M. Absher, Julie C. Baker, Richard M. Myers posted to development methylation sequencing by djkt on 2009-06-03 17:53:14 as along with 3 people absterga provero xingxu
	High-throughput genotyping by whole-genome resequencing. [My Copy] Genome research, Vol. 19, No. 6. (6 June 2009), pp. 1068-1076. by Xuehui Huang, Qi Feng, Qian Qian, et al.Qiang Zhao, Lu Wang, Ahong Wang, Jianping Guan, Danlin Fan, Qijun Weng, Tao Huang, Guojun Dong, Tao Sang, Bin Han posted to recombination sequencing snps by djkt on 2009-06-03 17:52:02 as along with 9 people APRegier jandot n00c reyez sandfire natstreet jbhiatt GeeSharpMinor langmead
	SNP detection for massively parallel whole-genome resequencing [My Copy] Genome Research, Vol. 19, No. 6. (6 June 2009), pp. 1124-1132. by Ruiqiang Li, Yingrui Li, Xiaodong Fang, et al.Huanming Yang, Jian Wang, Karsten Kristiansen, Jun Wang posted to sequencing snps by djkt on 2009-06-03 17:50:41 as along with 19 people Julien_Fayolle torfinnnome hzoltan seb1 maren adijr greg jandot guhjy jonilaserson n00c druvus reyez sandfire jasontsai sameersoi natstreet jbhiatt GeeSharpMinor
	Genome-Wide Identification of Human RNA Editing Sites by Parallel DNA Capturing and Sequencing [My Copy] Science, Vol. 324, No. 5931. (29 May 2009), pp. 1210-1213. by Jin B. Li, Erez Y. Levanon, Jung-Ki Yoon, et al.John Aach, Bin Xie, Emily Leproust, Kun Zhang, Yuan Gao, George M. Church posted to rna sequencing by djkt on 2009-05-30 18:22:38 as along with 8 people absterga reyez fenghezi hagechouchin443 neils jbhiatt giovanni fpattyn
	Discovery of Rare Variants via Sequencing: Implications for the Design of Complex Trait Association Studies. [My Copy] PLoS genetics, Vol. 5, No. 5. (May 2009) by B. Li, S. M. Leal posted to acertainment association design sequencing snps by djkt on 2009-05-15 16:40:29 as along with 7 people daforerog kimorley reyez psique bertrandservin giovanni jdbowes
	CloudBurst: highly sensitive read mapping with MapReduce [My Copy] Bioinformatics, Vol. 25, No. 11. (1 June 2009), pp. 1363-1369. by Michael C. Schatz posted to alignment computing sequencing by djkt on 2009-05-14 18:21:22 as along with 33 people and 2 groups joshdsullivan cthachuk hzoltan jfr walshtp idonaldson orzenil heliopais dakelley bozdagd agbiotec jandot guhjy n00c cymacs semrich nuin operon AlexBateman fgibson rschulz dswan mitko humburg jmeppley coela vagoskar svenrahmann natstreet brianb Neeperando druvus neils KCL & UCL Bioinformatics Bioinformatics

Note: You may cite this page as: http://www.citeulike.org/user/djkt/tag/sequencing

Result page: 1 2 Next

evolution	390
expression	250
popgen	214
selection	128
snps	126
proteins	116
human	108
metagenomics	106
microbes	101
sequencing	97
tf	96
phylogenetics	86
duplication	84
primates	83
rna	83
association	75
review	70
fly	63
conservation	59
msa	59
acceleration	57
chromatin	54
epigenetics	53
sv	51
recombination	49
yeast	47
qtl	46
arrays	44
indel	43
ecology	41
development	39
annotation	37
chromosome	36
alignment	35
diversity	34
motif	34
prediction	32
genome	31
mtp	31
rodents	31
mammals	29
repeats	27
testing	27
disease	24
divergence	23
splicing	22
chip-chip	21
demography	21
histone	21
mutation	21
variation	20
sysbio	19
molclock	18
simulation	18
virus	18
methylation	17
bgc	16
admixture	15
bayesian	15
imprinting	15
bias	14
microbiome	14
speciation	14
clustering	13
estimation	13
gccontent	13
nucleosome	13
db	12
genotyping	12
assembly	11
hmm	11
intron	11
cpg	10
domestication	10
enhancer	10
hiv	10
sex	10
stemcells	10
cancer	9
migration	9
model_selection	9
promoter	9
structure	9
design	8
environment	8
haplotype	8
community	7
dog	7
isochores	7
resampling	7
bacteria	6
brain	6
geography	6
lactation	6
replication	6
schizophrenia	6
ancient_dna	5
computing	5
foxp2	5
immunity	4
kmer	4
model	4
pathogen	4
power	4
reconstruction	4
worm	4
bioinfo	3
drift	3
gene-transfer	3
go	3
neanderthal	3
pax6	3
plants	3
synteny	3
theory	3
vertebrates	3
viualization	3
acertainment	2
aging	2
cardiovascular	2
classification	2
coalescent	2
correlation	2
diet	2
epistasis	2
ethics	2
fish	2
heterochromatin	2
mixture	2
network	2
novel	2
signalling	2
species_abundance	2
ultras	2
archaea	1
archeology	1
birds	1
centromeres	1
codon	1
ctcf	1
dimension_reduction	1
distribution	1
dna	1
enzymes	1
epidemiology	1
eukaryotes	1
forensics	1
gene_therapy	1
genome_size	1
heart	1
lactase	1
lineage_sorting	1
localization	1
lrt	1
metabolism	1
metabolomics	1
microsatellite	1
mirna	1
olfaction	1
pca	1
phosphorylation	1
placenta	1
ptmass	1
reelin	1
repeated_measures	1
roc	1
svd	1
teaching	1
teeth	1
transgenic	1
utr	1
vision	1
workflow	1

djkt's sequencing [97 articles] Export

djkt's tags