djkt's testing [27 articles] Export

Recent papers added to djkt's library classified by the tag testing. You can also see everyone's testing.

	Characterizing the D2 Statistic: Word Matches in Biological Sequences [My Copy] SAGMB, Vol. 8 by Sylvain Forêt, Susan R. Wilson, Conrad J. Burden posted to testing kmer distribution conservation by djkt on 2009-11-10 19:56:54 as along with 1 group iSEEM
	Empirical Bayes Estimates for Large-Scale Prediction Problems [My Copy] JASA, Vol. 104, pp. 1015-1028. by Bradley Efron posted to testing prediction by djkt on 2009-11-02 19:20:15 as along with 1 person rdiaz
	Multiple testing in genome-wide association studies via hidden Markov models [My Copy] Bioinformatics, Vol. 25, No. 21. (1 November 2009), pp. 2802-2808. by Zhi Wei, Wenguang Sun, Kai Wang, Hakon Hakonarson posted to testing snps mtp hmm association by djkt on 2009-10-23 23:54:18 as along with 6 people and 1 group ppgardne WJWilson rdiaz pkonings jmeppley guhjy Journal picks
	Calculating Asymptotic Significance Levels of the Constrained Likelihood Ratio Test with Application to Multivariate Genetic Linkage Analysis [My Copy] SAGMB, Vol. 8, No. 1., Article 39. by Nathan J. Morris, Robert Elston, Catherine M. Stein posted to testing lrt by djkt on 2009-10-06 05:29:59 as
	Rotation Testing in Gene Set Enrichment Analysis for Small Direct Comparison Experiments [My Copy] SAGMB, Vol. 8, No. 1., article 34. by Guro Dørum, Lars Snipen, Margrete Solheim, Solve Sæbø posted to testing mtp by djkt on 2009-09-23 17:05:08 as
	Statistical detection of cooperative transcription factors with similarity adjustment [My Copy] Bioinformatics (Oxford, England) In Bioinformatics, Vol. 25, No. 16. (15 August 2009), pp. 2103-2109. by Utz J. Pape, Holger Klein, Martin Vingron posted to motif testing tf by djkt on 2009-08-07 21:41:12 as along with 3 people bsamal idonaldson TRHvidsten
	SigWin-detector: a Grid-enabled workflow for discovering enriched windows of genomic features related to DNA sequences [My Copy] BMC Research Notes, Vol. 1, No. 1. (2008), 63. by Marcia Inda, Marinus van Batenburg, Marco Roos, et al.Adam Belloum, Dmitry Vasunin, Adianto Wibisono, Antoine van Kampen, Timo Breit posted to chromosome testing by djkt on 2009-08-03 19:21:59 as
	Fewer permutations, more accurate P-values [My Copy] Bioinformatics, Vol. 25, No. 12. (15 June 2009), pp. i161-168. by Theo A. Knijnenburg, Lodewyk F. A. Wessels, Marcel J. T. Reinders, Ilya Shmulevich posted to testing by djkt on 2009-05-28 23:43:04 as along with 10 people and 1 group heliopais jfr rdiaz Ayest farhat AlexBateman bmajoros idonaldson TRHvidsten sameersoi Journal picks
	Large-scale multiple testing under dependence [My Copy] Journal of the Royal Statistical Society: Series B (Statistical Methodology), Vol. 71, No. 2., pp. 393-424. by Wenguang Sun, Tony posted to mtp testing by djkt on 2009-05-11 17:36:14 as
	The difficulty of avoiding false positives in genome scans for natural selection [My Copy] Genome Research, Vol. 19, No. 5. (May 2009), pp. 922-933. by Swapan Mallick, Sante Gnerre, Paul Muller, David Reich posted to alignment selection testing by djkt on 2009-05-02 02:52:37 as along with 4 people operon dakelley gjuggler jbhiatt
	Rapid and accurate multiple testing correction and power estimation for millions of correlated markers. [My Copy] PLoS genetics, Vol. 5, No. 4. (17 April 2009), e1000456. by Buhm Han, Hyun Min M. Kang, Eleazar Eskin posted to association sequencing testing by djkt on 2009-04-17 16:47:32 as along with 12 people songpku xingxu brianb nuin buyske ekostem jdbowes guhjy psique ptrobajo emptyhb rdiaz
	Statistical Methods for Detecting Differentially Abundant Features in Clinical Metagenomic Samples [My Copy] PLoS Comput Biol, Vol. 5, No. 4. (10 April 2009), e1000352. by James R. White, Niranjan Nagarajan, Mihai Pop posted to metagenomics microbes microbiome testing by djkt on 2009-04-13 18:00:16 as along with 12 people and 2 groups jfr CorinYeats dayjm taylor73 Thaverkamp hpaces sriesenfeld APRegier dswan druvus skembel idoerg Orengo Group Journal Picks iSEEM
	Testing of Chromosomal Clumping of Gene Properties [My Copy] Statistical Applications in Genetics and Molecular Biology, Vol. 8, No. 1. (2009), article 19. by Luciano Fernandez-Ricaud, Daniel Dalevi, Anders Blomberg, Olle Nerman posted to chromosome expression testing by djkt on 2009-04-07 20:08:49 as along with 1 person bais
	QVALITY: non-parametric estimation of q-values and posterior error probabilities. [My Copy] Bioinformatics (Oxford, England), Vol. 25, No. 7. (1 April 2009), pp. 964-966. by Lukas Käll, John D. Storey, William Stafford S. Noble posted to bayesian testing by djkt on 2009-03-25 17:33:46 as along with 5 people guhjy jfr cassj nuin rdiaz
	Modified FDR Controlling Procedure for Multi-Stage Analyses [My Copy] Statistical Applications in Genetics and Molecular Biology, Vol. 8, No. 1. (2009), article 12. by Catherine Tuglus, Mark J. van der Laan posted to testing by djkt on 2009-03-24 18:16:39 as
	Optimal multistage designs--a general framework for efficient genome-wide association studies. [My Copy] Biostatistics (Oxford, England), Vol. 10, No. 2. (15 April 2009), pp. 297-309. by R. Pahl, H. Schäfer, H. H. Müller posted to association design testing by djkt on 2009-02-28 02:50:41 as along with 2 people renreff guhjy
	Multiperm: shuffling multiple sequence alignments while approximately preserving dinucleotide frequencies [My Copy] Bioinformatics (9 January 2009), btp006. by Parvez Anandam, Elfar Torarinsson, Walter L. Ruzzo posted to msa testing by djkt on 2009-02-25 18:04:57 as along with 2 people idonaldson rschulz
	A Groupwise Association Test for Rare Mutations Using a Weighted Sum Statistic [My Copy] PLoS Genet, Vol. 5, No. 2. (13 February 2009), e1000384. by Bo E. Madsen, Sharon R. Browning posted to association testing by djkt on 2009-02-13 18:32:29 as along with 5 people kimorley psique ptrobajo pkonings bertrandservin
	PASTAA: identifying transcription factors associated with sets of co-regulated genes [My Copy] Bioinformatics In Bioinformatics, Vol. 25, No. 4. (15 February 2009), pp. 435-442. by Helge G. Roider, Thomas Manke, Sean O'Keeffe, Martin Vingron, Stefan A. Haas posted to expression motif testing tf by djkt on 2009-02-13 18:30:18 as along with 11 people and 1 group bsamal TRHvidsten maximilianh jimineep cassj idonaldson dswan dolchan nuin natstreet druvus Bioinformatics
	ATOM: a powerful gene-based association test by combining optimally weighted markers. [My Copy] Bioinformatics (Oxford, England), Vol. 25, No. 4. (15 February 2009), pp. 497-503. by M. Li, K. Wang, S. F. Grant, H. Hakonarson, C. Li posted to association snps testing by djkt on 2009-02-13 18:29:11 as along with 4 people druvus guhjy akmanning pkonings
	Variable Locus Length in the Human Genome Leads to Ascertainment Bias in Functional Inference For Noncoding Elements [My Copy] Bioinformatics (25 January 2009), btp043. by Leila Taher, Ivan Ovcharenko posted to annotation go testing by djkt on 2009-01-26 16:42:32 as along with 2 people and 1 group caseybrown daveGerrard BergmanLab
	Bayes factors for genome-wide association studies: comparison with P-values. [My Copy] Genetic epidemiology, Vol. 33, No. 1. (18 January 2009), pp. 79-86. by Jon Wakefield posted to association bayesian testing by djkt on 2009-01-23 16:53:07 as along with 2 people jo_davies guhjy
	Distributions of Hardy-Weinberg Equilibrium Test Statistics [My Copy] Genetics, Vol. 180, No. 3. (1 November 2008), pp. 1609-1616. by R. V. Rohlfs, B. S. Weir posted to popgen testing by djkt on 2008-11-10 23:29:26 as along with 1 person guhjy
	Controlling Type-I Error of the McDonald-Kreitman Test in Genomewide Scans for Selection on Noncoding DNA [My Copy] Genetics, Vol. 180, No. 3. (1 November 2008), pp. 1767-1771. by Peter Andolfatto posted to popgen testing by djkt on 2008-11-10 23:26:53 as along with 4 people operon emptyhb druvus renewang
	Extended Bayesian information criteria for model selection with large model spaces [My Copy] Biometrika, Vol. 95, No. 3. (1 September 2008), pp. 759-771. by Jiahua Chen, Zehua Chen posted to model_selection testing by djkt on 2008-11-04 03:27:01 as
	Statistical Significance of Clustering for High-Dimension, LowSample Size Data [My Copy] Journal of the American Statistical Association, Vol. 103, No. 483. (September 2008), pp. 1281-1293. by Yufeng Liu, David Neil N. Hayes, Andrew Nobel, J. S. Marron posted to clustering testing by djkt on 2008-11-03 16:46:46 as
	A Test for Partial Differential Expression [My Copy] Journal of the American Statistical Association, Vol. 103, No. 483. (September 2008), pp. 1039-1049. by Wessel N. van Wieringen, Mark A. van de Wiel, Aad W. van der Vaart posted to expression mixture testing by djkt on 2008-11-03 16:41:47 as

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evolution	393
expression	262
popgen	218
selection	130
snps	128
proteins	117
human	116
metagenomics	107
microbes	106
tf	100
sequencing	98
phylogenetics	87
rna	85
duplication	85
primates	84
association	75
review	70
fly	66
conservation	64
msa	59
acceleration	57
chromatin	57
epigenetics	56
sv	52
recombination	52
yeast	48
qtl	46
indel	44
arrays	44
ecology	41
development	39
motif	39
annotation	37
chromosome	37
alignment	35
diversity	34
rodents	32
prediction	32
genome	31
mtp	31
mammals	30
testing	27
repeats	27
disease	25
divergence	25
demography	24
splicing	23
histone	23
chip-chip	21
mutation	21
sysbio	20
variation	20
methylation	19
simulation	18
virus	18
molclock	18
admixture	17
imprinting	16
bgc	16
microbiome	15
bayesian	15
speciation	15
bias	14
estimation	14
clustering	13
gccontent	13
nucleosome	13
stemcells	13
db	12
genotyping	12
intron	11
enhancer	11
hmm	11
assembly	11
domestication	10
hiv	10
sex	10
migration	10
cpg	10
structure	10
cancer	9
promoter	9
model_selection	9
environment	8
design	8
haplotype	8
dog	7
resampling	7
community	7
isochores	7
brain	6
schizophrenia	6
replication	6
bacteria	6
lactation	6
geography	6
computing	5
worm	5
ancient_dna	5
foxp2	5
power	4
model	4
reconstruction	4
immunity	4
kmer	4
pathogen	4
bioinfo	3
go	3
synteny	3
correlation	3
plants	3
pax6	3
viualization	3
ctcf	3
drift	3
gene-transfer	3
neanderthal	3
vertebrates	3
diet	3
theory	3
coalescent	2
ultras	2
signalling	2
fish	2
heterochromatin	2
cardiovascular	2
metabolomics	2
network	2
classification	2
species_abundance	2
ethics	2
mixture	2
acertainment	2
novel	2
epistasis	2
aging	2
epidemiology	1
vision	1
workflow	1
distribution	1
lineage_sorting	1
svd	1
transgenic	1
dimension_reduction	1
pca	1
birds	1
mirna	1
centromeres	1
meiosis	1
archaea	1
genome_size	1
enzymes	1
teaching	1
roc	1
teeth	1
lrt	1
phosphorylation	1
localization	1
proteomics	1
heart	1
utr	1
operons	1
gene_therapy	1
metabolism	1
microsatellite	1
repeated_measures	1
eukaryotes	1
reelin	1
placenta	1
lactase	1
olfaction	1
codon	1
archeology	1
ptmass	1
dna	1
forensics	1

djkt's testing [27 articles] Export

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