The performance of state-of-the-art modelling techniques depends on geographical distribution of species Export

@article{citeulike:3787662, abstract = {We explored the effects of prevalence, latitudinal range and clumping (spatial autocorrelation) of species distribution patterns on the predictive accuracy of eight state-of-the-art modelling techniques: Generalized Linear Models (GLMs), Generalized Boosting Method (GBM), Generalized Additive Models (GAMs), Classification Tree Analysis (CTA), Artificial Neural Network (ANN), Multivariate Adaptive Regression Splines (MARS), Mixture Discriminant Analysis (MDA) and Random Forest (RF). One hundred species of Lepidoptera, selected from the Distribution Atlas of European Butterflies, and three climate variables were used to determine the bioclimatic envelope for each butterfly species. The data set consisting of 2620 grid squares 30′ × 60′ in size all over Europe was randomly split into the calibration and the evaluation data sets. The performance of different models was assessed using the area under the curve (AUC) of a receiver operating characteristic (ROC) plot. Observed differences in modelling accuracy among species were then related to the geographical attributes of the species using GAM. The modelling performance was negatively related to the latitudinal range and prevalence, whereas the effect of spatial autocorrelation on prediction accuracy depended on the modelling technique. These three geographical attributes accounted for 19–61\% of the variation in the modelling accuracy. Predictive accuracy of GAM, GLM and MDA was highly influenced by the three geographical attributes, whereas RF, ANN and GBM were moderately, and MARS and CTA only slightly affected. The contrasting effects of geographical distribution of species on predictive performance of different modelling techniques represent one source of uncertainty in species spatial distribution models. This should be taken into account in biogeographical modelling studies and assessments of climate change impacts.}, author = {Marmion, Mathieu and Luoto, Miska and Heikkinen, Risto K. and Thuiller, Wilfried}, citeulike-article-id = {3787662}, citeulike-linkout-0 = {http://dx.doi.org/10.1016/j.ecolmodel.2008.10.019}, citeulike-linkout-1 = {http://linkinghub.elsevier.com/retrieve/pii/S0304380008004948}, day = {13}, doi = {10.1016/j.ecolmodel.2008.10.019}, issn = {03043800}, journal = {Ecological Modelling}, keywords = {cart, distribution-modeling, gam, glm, mars, model-comparison, neural-networks, random-forests}, month = {December}, posted-at = {2008-12-14 15:55:08}, priority = {2}, title = {The performance of state-of-the-art modelling techniques depends on geographical distribution of species}, url = {http://dx.doi.org/10.1016/j.ecolmodel.2008.10.019}, year = {2008} }

TY - JOUR ID - citeulike:3787662 L3 - citeulike-article-id:3787662 N2 - We explored the effects of prevalence, latitudinal range and clumping (spatial autocorrelation) of species distribution patterns on the predictive accuracy of eight state-of-the-art modelling techniques: Generalized Linear Models (GLMs), Generalized Boosting Method (GBM), Generalized Additive Models (GAMs), Classification Tree Analysis (CTA), Artificial Neural Network (ANN), Multivariate Adaptive Regression Splines (MARS), Mixture Discriminant Analysis (MDA) and Random Forest (RF). One hundred species of Lepidoptera, selected from the Distribution Atlas of European Butterflies, and three climate variables were used to determine the bioclimatic envelope for each butterfly species. The data set consisting of 2620 grid squares 30′ × 60′ in size all over Europe was randomly split into the calibration and the evaluation data sets. The performance of different models was assessed using the area under the curve (AUC) of a receiver operating characteristic (ROC) plot. Observed differences in modelling accuracy among species were then related to the geographical attributes of the species using GAM. The modelling performance was negatively related to the latitudinal range and prevalence, whereas the effect of spatial autocorrelation on prediction accuracy depended on the modelling technique. These three geographical attributes accounted for 19–61% of the variation in the modelling accuracy. Predictive accuracy of GAM, GLM and MDA was highly influenced by the three geographical attributes, whereas RF, ANN and GBM were moderately, and MARS and CTA only slightly affected. The contrasting effects of geographical distribution of species on predictive performance of different modelling techniques represent one source of uncertainty in species spatial distribution models. This should be taken into account in biogeographical modelling studies and assessments of climate change impacts. JF - Ecological Modelling SN - 03043800 TI - The performance of state-of-the-art modelling techniques depends on geographical distribution of species KW - cart KW - distribution-modeling KW - gam KW - glm KW - mars KW - model-comparison KW - neural-networks KW - random-forests AU - Marmion, Mathieu AU - Luoto, Miska AU - Heikkinen, Risto AU - Thuiller, Wilfried PY - 2008/12/13/ UR - http://dx.doi.org/10.1016/j.ecolmodel.2008.10.019 ER -