dpollard's method [56 articles] Export

Recent papers added to dpollard's library classified by the tag method. You can also see everyone's method.

	CLIP: a method for identifying protein-RNA interaction sites in living cells. [My Copy] Methods (San Diego, Calif.), Vol. 37, No. 4. (December 2005), pp. 376-386. by Jernej Ule, Kirk Jensen, Aldo Mele, Robert B. Darnell posted to biochemical in_vivo method rnp by dpollard on 2009-07-07 22:16:55 as along with 1 person and 1 group kieran101 RockmanLab
	Discovering structural cis-regulatory elements by modeling the behaviors of mRNAs. [My Copy] Molecular systems biology, Vol. 5 (28 April 2009) by B. C. Foat, G. D. Stormo posted to method motif_detection rna_structure by dpollard on 2009-05-05 16:14:42 as along with 3 people and 1 group cassj psique TRHvidsten RockmanLab
	Capturing the spectrum of interaction effects in genetic association studies by simulated evaporative cooling network analysis. [My Copy] PLoS genetics, Vol. 5, No. 3. (20 March 2009), e1000432. by Brett A. McKinney, James E. Crowe, Jingyu Guo, Dehua Tian posted to association_mapping epistasis method by dpollard on 2009-04-15 19:22:14 as along with 4 people and 1 group daforerog guhjy jdbowes rdiaz RockmanLab
	ChIP-seq accurately predicts tissue-specific activity of enhancers [My Copy] Nature, Vol. 457, No. 7231. (12 February 2009), pp. 854-858. by Axel Visel, Matthew J. Blow, Zirong Li, et al.Tao Zhang, Jennifer A. Akiyama, Amy Holt, Ingrid Plajzer-Frick, Malak Shoukry, Crystal Wright, Feng Chen, Veena Afzal, Bing Ren, Edward M. Rubin, Len A. Pennacchio posted to chip_seq method by dpollard on 2009-02-12 22:09:48 as along with 23 people and 2 groups hzoltan tonamswish ewilban1 samanthacooper ashkelon13 isimpson gdb dnewburger jochenG bertelsen oelemento rpatward cajunsushi WanderingAengus absterga provero cassj anphony caseybrown biomcgary xingxu idonaldson djkt RockmanLab cis-regulatory-evolution
	Purification of proteins associated with specific genomic Loci. [My Copy] Cell, Vol. 136, No. 1. (9 January 2009), pp. 175-186. by Jérôme Déjardin, Robert E. Kingston posted to method protein_dna_interaction proteomics transcription_factor by dpollard on 2009-02-10 20:46:54 as along with 8 people and 1 group TorstenWaldminghaus rschulz fenghezi xingxu christoffpale ericsuh faion rjlawren RockmanLab
	Population Genetic Inference From Resequencing Data [My Copy] Genetics, Vol. 181, No. 1. (1 January 2009), pp. 187-197. by Rong Jiang, Simon Tavare, Paul Marjoram posted to 454 method next_gen_sequencing parameter_estimation solexa by dpollard on 2009-01-15 17:08:28 as along with 10 people and 3 groups scmelton taylor73 maren jbsaltz katholt natstreet djkt abizar druvus stajich RockmanLab iSEEM Mycology
	Rapid SNP Discovery and Genetic Mapping Using Sequenced RAD Markers [My Copy] PLoS ONE, Vol. 3, No. 10. (13 October 2008), e3376. by Nathan A. Baird, Paul D. Etter, Tressa S. Atwood, et al.Mark C. Currey, Anthony L. Shiver, Zachary A. Lewis, Eric U. Selker, William A. Cresko, Eric A. Johnson posted to mapping method rockman_journal_club snps by dpollard on 2009-01-05 19:47:49 as along with 1 group RockmanLab
	A genome-wide approach to identifying novel-imprinted genes. [My Copy] Hum Genet, Vol. 122, No. 6. (January 2008), pp. 625-634. by K. S. Pollard, D. Serre, X. Wang, et al.H. Tao, E. Grundberg, T. J. Hudson, A. G. Clark, K. Frazer posted to allele-specific array expression method rockman_journal_club by dpollard on 2008-06-27 21:03:45 as along with 4 people and 1 group alweber bpcusack nolodie gjuggler RockmanLab
	Genome-wide allele-specific expression analysis using Massively Parallel Signature Sequencing (MPSS) reveals cis- and trans-effects on gene expression in maize hybrid meristem tissue. [My Copy] Plant molecular biology, Vol. 66, No. 5. (March 2008), pp. 551-563. by M. Guo, S. Yang, M. Rupe, et al.B. Hu, D. R. Bickel, L. Arthur, O. Smith posted to allele-specific expression massively_parallel_signature_sequencing method rockman_journal_club by dpollard on 2008-06-27 21:00:03 as along with 1 person and 1 group caseybrown RockmanLab
	Analysis of allelic differential expression in human white blood cells [My Copy] Genome Res., Vol. 16, No. 3. (1 March 2006), pp. 331-339. by Krishna P. V. Pant, Heng Tao, Erica J. Beilharz, Dennis G. Ballinger, David R. Cox, Kelly A. Frazer posted to allele-specific array expression method rockman_journal_club by dpollard on 2008-06-27 20:54:12 as along with 5 people and 1 group xwbcn RMGraze qfwills emarker mimulus_99 RockmanLab
	SNP-specific array-based allele-specific expression analysis. [My Copy] Genome research, Vol. 18, No. 5. (27 May 2008), pp. 771-779. by H. T. Bjornsson, T. J. Albert, C. M. Ladd-Acosta, et al.R. D. Green, M. A. Rongione, C. M. Middle, R. A. Irizarry, K. W. Broman, A. P. Feinberg posted to allele-specific array expression method rockman_journal_club by dpollard on 2008-06-27 20:50:13 as along with 5 people and 1 group vplagnol gruberjd xwbcn guhjy rschulz RockmanLab
	Allelic Variation in Gene Expression Is Common in the Human Genome [My Copy] Genome Res., Vol. 13, No. 8. (1 August 2003), pp. 1855-1862. by Shuen H. Lo, Zhining Wang, Ying Hu, et al.Howard H. Yang, Sheryl Gere, Kenneth H. Buetow, Maxwell P. Lee posted to affy_array allele-specific expression method rockman_journal_club by dpollard on 2008-06-27 20:44:16 as along with 4 people and 1 group RMGraze qfwills emarker mimulus_99 RockmanLab
	Allele-Specific Chromatin Immunoprecipitation Studies Show Genetic Influence on Chromatin State in Human Genome [My Copy] PLoS Genetics, Vol. 3, No. 5. (1 May 2007), e81. by Mitsutaka Kadota, Howard H. Yang, Nan Hu, et al.Chaoyu Wang, Ying Hu, Philip R. Taylor, Kenneth H. Buetow, Maxwell P. Lee posted to allele-specific chip_chip method by dpollard on 2008-06-27 20:41:19 as along with 1 group RockmanLab
	Differential allelic expression in the human genome: a robust approach to identify genetic and epigenetic cis-acting mechanisms regulating gene expression. [My Copy] PLoS genetics, Vol. 4, No. 2. (29 February 2008), e1000006. by D. Serre, S. Gurd, B. Ge, et al.R. Sladek, D. Sinnett, E. Harmsen, M. Bibikova, E. Chudin, D. L. Barker, T. Dickinson, J. B. Fan, T. J. Hudson posted to allele-specific expression illumina_beads method rockman_journal_club by dpollard on 2008-06-27 20:36:21 as along with 6 people and 2 groups fenghezi athma gruberjd guhjy vplagnol caseybrown cis-regulatory-evolution RockmanLab
	Gene network inference via structural equation modeling in genetical genomics experiments. [My Copy] Genetics, Vol. 178, No. 3. (3 March 2008), pp. 1763-1776. by B. Liu, A. de la Fuente, I. Hoeschele posted to eqtl method network system by dpollard on 2008-02-12 23:12:26 as along with 8 people and 1 group roys Scis0000002 orzenil raiyar xingxu caseybrown smgomez guhjy EisenLab
	Using DNA duplex stability information for transcription factor binding site discovery. [My Copy] Pac Symp Biocomput (2008), pp. 453-464. by R. Gordân, A. J. Hartemink posted to binding_site biophysical_model method motif_detection prediction transcription_factor by dpollard on 2008-02-01 06:21:41 as along with 1 person and 1 group bootsy EisenLab
	The effect of the guide tree on multiple sequence alignments and subsequent phylogenetic analyses. [My Copy] Pac Symp Biocomput (2008), pp. 25-36. by S. Nelesen, K. Liu, D. Zhao, C. R. Linder, T. Warnow posted to accuracy alignment alignment_accuracy method multiple_alignment phylogeny reconstruction by dpollard on 2008-02-01 06:14:51 as along with 2 people and 1 group sriesenfeld treangen EisenLab
	CisModule: De novo discovery of cis-regulatory modules by hierarchical mixture modeling [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 101, No. 33. (17 August 2004), pp. 12114-12119. by Qing Zhou, Wing H. Wong posted to ab_initio cis_regulatory_elements clustering method prediction by dpollard on 2007-12-05 22:46:33 as along with 4 people and 1 group tonamswish isimpson indigoviolet ep161302 EisenLab
	Genome-wide analysis of clustered Dorsal binding sites identifies putative target genes in the Drosophila embryo. [My Copy] Proc Natl Acad Sci U S A, Vol. 99, No. 2. (22 January 2002), pp. 763-768. by M. Markstein, P. Markstein, V. Markstein, M. S. Levine posted to cis_regulatory_elements clustering drosophila embryonic_patterning method prediction by dpollard on 2007-12-05 20:41:26 as along with 2 people and 1 group emptyhb indigoviolet EisenLab
	Accurate gene-tree reconstruction by learning gene- and species-specific substitution rates across multiple complete genomes. [My Copy] Genome research, Vol. 17, No. 12. (7 December 2007), pp. 1932-1942. by Matthew D. Rasmussen, Manolis Kellis posted to drosophila method phylogeny prediction yeast by dpollard on 2007-11-21 02:56:16 as along with 6 people and 1 group roys mmfonseca inquil druvus stajich caseybrown EisenLab
	The cost of inbreeding in Arabidopsis. [My Copy] Nature, Vol. 416, No. 6880. (4 April 2002), pp. 531-534. by C. D. Bustamante, R. Nielsen, S. A. Sawyer, K. M. Olsen, M. D. Purugganan, D. L. Hartl posted to method population_genetics test_for_selection by dpollard on 2007-11-19 07:32:25 as along with 2 people and 1 group emptyhb djkt EisenLab
	MORPH: Probabilistic Alignment Combined with Hidden Markov Models of cis-Regulatory Modules [My Copy] PLoS Computational Biology, Vol. 3, No. 11. (1 November 2007), e216. by Saurabh Sinha, Xin He posted to alignment alignment_accuracy binding_site_alignment brant_presented cis_regulatory_elements eisen_journal_club method round_robin by dpollard on 2007-11-16 23:53:34 as along with 7 people and 2 groups ana cjeans zwang maximilianh hpaces Ema uwe EisenLab cis-regulatory-evolution
	Transcriptional Control in the Segmentation Gene Network of Drosophila [My Copy] PLoS Biol, Vol. 2, No. 9. (31 August 2004), e271. by Mark D. Schroeder, Michael Pearce, John Fak, et al.HongQing Fan, Ulrich Unnerstall, Eldon Emberly, Nikolaus Rajewsky, Eric D. Siggia, Ulrike Gaul posted to cis_regulatory_elements embryonic_patterning expression_pattern method modeling prediction by dpollard on 2007-11-07 22:44:52 as along with 8 people and 5 groups daveGerrard indigoviolet adepace wrowell emptyhb dlmace pradiptaray balicea BergmanLab TranscriptionalRegulationWithThermodynamicModels EisenLab Cline_lab UH - Computational Biology
	Bayesian estimation of concordance among gene trees. [My Copy] Mol Biol Evol, Vol. 24, No. 2. (February 2007), pp. 412-426. by C. Ané, B. Larget, D. A. Baum, S. D. Smith, A. Rokas posted to concordance gene_tree gene_vs_species_tree method phylogeny speciation by dpollard on 2007-11-06 22:35:21 as along with 2 people and 1 group aprasad AaronDarling EisenLab
	Discovery of Regulatory Elements by a Computational Method for Phylogenetic Footprinting [My Copy] Genome Res., Vol. 12, No. 5. (1 May 2002), pp. 739-748. by Mathieu Blanchette, Martin Tompa posted to ab_initio binding_site conservation method prediction by dpollard on 2007-11-01 00:41:11 as along with 7 people and 2 groups wowalz coldmeadow chad_davis balajis lyongu dquest csdhwang EisenLab cis-regulatory-evolution
	Enhancing the quality of phylogenetic analysis using fuzzy hidden Markov model alignments. [My Copy] Medinfo, Vol. 12, No. Pt 2. (2007), pp. 1245-1249. by C. Collyda, S. Diplaris, P. Mitkas, N. Maglaveras, C. Pappas posted to alignment alignment_accuracy method phylogeny by dpollard on 2007-10-25 02:23:22 as along with 1 group EisenLab
	Incorporating evolution of transcription factor binding sites into annotated alignments. [My Copy] J Biosci, Vol. 32, No. 5. (August 2007), pp. 841-850. by A. S. Bais, S. Grossmann, M. Vingron posted to alignment binding_site conserved method prediction by dpollard on 2007-10-25 02:20:56 as along with 1 person and 2 groups maximilianh EisenLab cis-regulatory-evolution
	Systematic detection of statistically overrepresented DNA motif association rules. [My Copy] Genome Inform, Vol. 17, No. 1. (2006), pp. 124-133. by J. M. Lin, Z. Weng posted to ab_initio binding_site eisen_journal_club method motif_detection prediction round_robin rules venky_presented by dpollard on 2007-06-15 00:04:13 as along with 1 person and 1 group indigoviolet EisenLab
	Computational and experimental approaches for modeling gene regulatory networks. [My Copy] Curr Pharm Des, Vol. 13, No. 14. (2007), pp. 1415-1436. by J. Goutsias, N. H. Lee posted to computational experimental method modeling regulatory_network review by dpollard on 2007-06-14 23:48:35 as along with 1 person and 1 group bertelsen EisenLab
	Binding Site Graphs: A New Graph Theoretical Framework for Prediction of Transcription Factor Binding Sites [My Copy] PLoS Comput Biol, Vol. 3, No. 5. (11 May 2007), e90. by Timothy E. Reddy, Charles DeLisi, Boris E. Shakhnovich posted to ab_initio binding_site eisen_journal_club method motif round_robin venky_presented yeast by dpollard on 2007-06-14 23:38:43 as along with 7 people and 1 group pradiptaray nklee aalibes medic0747 GustavoLacerda mircea marti EisenLab
	Determination of local statistical significance of patterns in Markov sequences with application to promoter element identification. [My Copy] J Comput Biol, Vol. 11, No. 1. (2004), pp. 1-14. by H. Huang, M. C. Kao, X. Zhou, J. S. Liu, W. H. Wong posted to ab_initio binding_site eisen_journal_club markov method motif round_robin stuart_presented by dpollard on 2007-06-04 22:47:45 as along with 1 person and 1 group jguinney EisenLab
	Localizing Recent Adaptive Evolution in the Human Genome [My Copy] PLoS Genetics, Vol. 3, No. 6. (1 June 2007), e90. by Scott H. Williamson, Melissa J. Hubisz, Andrew G. Clark, Bret A. Payseur, Carlos D. Bustamante, Rasmus Nielsen posted to adaptive_evolution dan_presented eisen_journal_club human method prediction round_robin by dpollard on 2007-05-31 23:22:20 as along with 11 people and 2 groups athma ilyashl renewang mbj brant madhadron candypmcg shoshin emarker iris42 dmc EisenLab Durbin group
	Binding Site Graphs: A New Graph Theoretical Framework for Prediction of Transcription Factor Binding Sites [My Copy] PLoS Computational Biology, Vol. 3, No. 5. (1 May 2007), e90. by Timothy E. Reddy, Charles Delisi, Boris E. Shakhnovich posted to cis_regulatory_elements method prediction by dpollard on 2007-05-31 23:16:30 as along with 2 people and 1 group adepace ajgentles EisenLab
	Imputation-based analysis of association studies: candidate regions and quantitative traits [My Copy] PLoS Genetics, Vol. preprint, No. 2007. (1 May 2007), e114.eor. by Bertrand Servin, Matthew Stephens posted to association_mapping method by dpollard on 2007-05-31 22:45:19 as along with 1 group EisenLab
	SPACER: identification of cis-regulatory elements with non-contiguous critical residues. [My Copy] Bioinformatics, Vol. 23, No. 8. (15 April 2007), pp. 1029-1031. by A. Chakravarty, J. M. Carlson, R. S. Khetani, C. E. DeZiel, R. H. Gross posted to binding_site cis_regulatory_elements clustering method prediction by dpollard on 2007-05-23 01:10:50 as along with 1 group EisenLab
	STAMP: a web tool for exploring DNA-binding motif similarities. [My Copy] Nucleic acids research, Vol. 35, No. Web Server issue. (3 July 2007) by Shaun Mahony, Panayiotis V. Benos posted to alignment method motif pwm website by dpollard on 2007-05-23 00:40:45 as along with 3 people and 1 group yuslinaz aalibes raylim EisenLab
	A phylogenetic Gibbs sampler that yields centroid solutions for cis-regulatory site prediction [My Copy] Bioinformatics, Vol. 23, No. 14. (15 July 2007), pp. 1718-1727. by Lee A. Newberg, William A. Thompson, Sean Conlan, Thomas M. Smith, Lee A. McCue, Charles E. Lawrence posted to cis_regulatory_elements clustering discovery method motif prediction by dpollard on 2007-05-23 00:29:25 as along with 7 people and 1 group vingron operon Dulce Mehlhorn cjeans sconlan siebert EisenLab
	RE-MuSiC: a tool for multiple sequence alignment with regular expression constraints. [My Copy] Nucleic Acids Res (8 May 2007) by Yun-Sheng S. Chung, Wei-Hsun H. Lee, Chuan Yi Y. Tang, Chin Lung L. Lu posted to method multiple_alignment regular_expressions by dpollard on 2007-05-23 00:25:21 as along with 1 group EisenLab
	Discovering transcriptional regulatory regions in Drosophila by a nonalignment method for phylogenetic footprinting. [My Copy] Proc Natl Acad Sci U S A (29 March 2007) by Alona Sosinsky, Barry Honig, Richard S S. Mann, Andrea Califano posted to clustering comparative drosophila enhancer method prediction by dpollard on 2007-04-09 17:43:36 as along with 4 people and 2 groups Stew maximilianh cisevol isimpson EisenLab cis-regulatory-evolution
	ChIP-on-chip protocol for genome-wide analysis of transcription factor binding in Drosophila melanogaster embryos. [My Copy] Nat Protoc, Vol. 1, No. 6. (2006), pp. 2839-2855. by T. Sandmann, J. S. Jakobsen, E. E. Furlong posted to binding chip_chip drosophila method transcription_factor by dpollard on 2007-04-09 17:24:28 as along with 1 person and 1 group johncumbers EisenLab
	In vitro analysis of DNA-protein interactions by proximity ligation. [My Copy] Proc Natl Acad Sci U S A, Vol. 104, No. 9. (27 February 2007), pp. 3067-3072. by S. M. Gustafsdottir, J. Schlingemann, A. Rada-Iglesias, et al.E. Schallmeiner, M. Kamali-Moghaddam, C. Wadelius, U. Landegren posted to binding colin_presented eisen_journal_club method round_robin transcription_factor by dpollard on 2007-03-23 19:28:14 as along with 2 people and 1 group guhjy zwang EisenLab
	Global Discriminative Learning for Higher-Accuracy Computational Gene Prediction [My Copy] PLoS Computational Biology, Vol. 3, No. 3. (1 March 2007), e54. by Axel Bernal, Koby Crammer, Artemis Hatzigeorgiou, Fernando Pereira posted to ab_initio gene_prediction method by dpollard on 2007-03-23 00:33:15 as along with 1 person and 1 group GustavoLacerda EisenLab
	Multiple Hypothesis Testing to Detect Lineages Under Positive Selection that Affects Only a Few Sites. [My Copy] Mol Biol Evol (5 March 2007) by Maria Anisimova, Ziheng Yang posted to adaptive evolution method multiple_testing by dpollard on 2007-03-22 23:51:26 as along with 3 people and 2 groups stevanspringer operon gjuggler EisenLab FAB-lab
	Incorporating indel information into phylogeny estimation for rapidly emerging pathogens [My Copy] BMC Evolutionary Biology, Vol. 7, No. 1. (14 March 2007), 40. by Benjamin Redelings, Marc Suchard posted to alignment gene indels method phylogeny by dpollard on 2007-03-22 22:56:37 as along with 5 people and 1 group timflutre druvus operon aprasad stajich EisenLab
	Global Discriminative Learning for Higher-Accuracy Computational Gene Prediction [My Copy] PLoS Computational Biology, Vol. 3, No. 3. (1 March 2007), e54. by Axel Bernal, Koby Crammer, Artemis Hatzigeorgiou, Fernando Pereira posted to ab_initio gene_prediction method by dpollard on 2007-03-16 21:10:40 as along with 5 people and 2 groups dakelley wenhan zwang acarbo alexl Bioinformatics EisenLab
	Computational methods for transcriptional regulation. [My Copy] Curr Opin Genet Dev, Vol. 15, No. 2. (April 2005), pp. 214-221. by E. D. Siggia posted to cis_regulatory_elements expression_pattern gene_expression method modeling prediction by dpollard on 2007-03-15 00:30:41 as along with 7 people and 2 groups barry koller bertelsen Borelli nklee balicea jjray Bioinformatics EisenLab
	Prediction of cis-regulatory elements using binding site matrices--the successes, the failures and the reasons for both. [My Copy] Curr Opin Genet Dev, Vol. 15, No. 4. (August 2005), pp. 395-402. by T. Vavouri, G. Elgar posted to binding_site cis_regulatory_elements method motif pattern prediction pwm regulatory_sequence by dpollard on 2007-03-15 00:24:34 as along with 6 people and 2 groups troels_marstrand kaspermunch adepace lusk Stew brant Bioinformatics EisenLab
	Statistical significance of cis-regulatory modules [My Copy] BMC Bioinformatics, Vol. 8, No. 1. (2007) by Dustin Schones, Andrew Smith, Michael Zhang posted to prediction method crm by dpollard on 2007-02-01 19:56:05 as along with 10 people and 1 group druvus indigoviolet dquest sebastien_vigneau shigepong SeungjoonOh GustavoLacerda nklee xili03 sconlan EisenLab
	Multiple alignment by sequence annealing. [My Copy] Bioinformatics, Vol. 23, No. 2. (15 January 2007) by A. S. Schwartz, L. Pachter posted to protein method alignment by dpollard on 2007-02-01 19:47:22 as along with 1 group EisenLab
	Single-Molecule Detection of Transcription Factor Binding to DNA in Real Time: Specificity, Equilibrium, and Kinetic Parameters. [My Copy] Biochemistry, Vol. 45, No. 46. (21 November 2006), pp. 13794-13806. by Eric A. Nalefski, Eugene Nebelitsky, Janice A. Lloyd, Steven R. Gullans posted to binding kenetics method motif by dpollard on 2006-11-17 13:00:37 as along with 1 group EisenLab

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drosophila	119
eisen_journal_club	115
round_robin	94
evolution	71
method	56
cis_regulatory_elements	51
gene	45
prediction	43
expression	40
binding_site	32
transcription	27
alignment	25
yeast	25
review	24
development	22
variation	22
in_depth_suggestion	20
transcription_factor	19
motif	18
phylogeny	18
selection	18
expression_pattern	17
turnover	17
binding	16
genome_architecture	16
polymorphism	16
regulatory_evolution	16
rockman_journal_club	16
adaptive	15
conserved	15
dan_presented	15
network	15
qtl	15
rate	15
gene_expression	14
human	14
modeling	14
devin_presented	13
genome_size	13
noncoding	13
c_elegans	12
colin_presented	12
grammar	12
indels	12
pattern	12
population_genetics	12
chip_chip	11
in_depth	11
promoter	11
rnai	11
embryonic_patterning	10
regulatory_sequence_evolution	10
rich_presented	10
allele-specific	9
association_mapping	9
eqtl	9
expression_divergence	9
insect	9
model	9
ab_initio	8
alignment_accuracy	8
angela_presented	8
duplication	8
mammal	8
regulatory_sequence	8
small_rnas	8
stuart_presented	8
venky_presented	8
adaptation	7
chromatin	7
constraint	7
lab_library	7
matt_presented	7
protein	7
pwm	7
regulation	7
speciation	7
annotation	6
array	6
clustering	6
comparative	6
conservation	6
crm	6
embryo	6
emily_presented	6
epistasis	6
expression_polymorphism	6
regulatory_polymorphism	6
brain	5
enhancer	5
evo_devo	5
insulators	5
motif_detection	5
mutation	5
nucleosome	5
population_structure	5
recombination	5
reconstruction	5
regulatory_network	5
seminal_paper	5
structure	5
system	5
transposable_elements	5
vertebrate	5
bacteria	4
brant_presented	4
chromatin_modification	4
discovery	4
dynamics	4
environment	4
gene_family	4
genome_wide	4
indel	4
insects	4
lenny_presented	4
nervous	4
neuro	4
snps	4
te	4
worms	4
accuracy	3
affinity	3
argonaute	3
cis_vs_trans	3
coactivator	3
comparative_genomics	3
correlation	3
dominance	3
effect_size	3
enhanceosome	3
experimental_evolution	3
fitness	3
genome	3
genome_sequence	3
genomic	3
intergenic	3
mapping	3
mechanism	3
microrna	3
morphological_evolution	3
mouse	3
multiple_alignment	3
nematode	3
neutral	3
noncoding_dna	3
spacing	3
stew_presented	3
test_for_selection	3
tree	3
whole_genome	3
3utr	2
adaptive_evolution	2
association	2
binding_site_alignment	2
bootstrap	2
cis	2
coexpression	2
color_variation	2
complex_trait	2
composition	2
concatonation	2
convergent	2
corepression	2
database	2
divergence_estimation	2
gene_prediction	2
gene_tree	2
germline	2
gradient	2
histone	2
hitchhiking	2
hox	2
hybrid	2
hypersensitive	2
in-depth	2
inversion	2
kenetics	2
length	2
lineage_specific	2
linkage	2
loss	2
meiosis	2
modularity	2
noncoding_rna	2
noncoding_transcription	2
non-essential	2
parameter_estimation	2
pigmentation	2
placticity	2
positive_selection	2
protein_function_evolution	2
proteomics	2
pseudogene	2
purifying	2
repression	2
rna	2
sechellia	2
sequence_specificity	2
specific	2
translation_rate	2
vertibrates	2
website	2
454	1
acid	1
advanced_intercross	1
affy_array	1
americana	1
amino	1
amino_acid	1
anterior_posterior	1
antisense	1
antiviral	1
ap_x_dv	1
assembly	1
background_selection	1
base	1
bee	1
biochemical	1
biophysical_model	1
body	1
bristle	1
browser	1
cgh	1
chimp	1
chimpanzee	1
chip_seq	1
cis_reg_polymorphism	1
cnv	1
co_dominance	1
codon_usage	1
coevolution	1
cofactor	1
cognative_evolution	1
computational	1
concordance	1
cutoff	1
danr_presented	1
data	1
degredation	1
demography	1
detection	1
diffusion	1
disease	1
dnasei	1
dn_ds_ratio	1
domain	1
domains	1
domestication	1
dosage_compensation	1
encode	1
energy_landscape	1
eukaryote	1
even-skipped	1
experimental	1
experssion_pattern	1
extension	1
extrinsic	1
false_positive	1
fish	1
formation	1
fst	1
ftz	1
gc_content	1
genealogy	1
gene_by_environment_interaction	1
gene-expression	1
gene_function_evolution	1
genetic	1
genetic_interactions	1
genetic_screen	1
gene_vs_species_tree	1
genome_structure	1
germ	1
gwas	1
haplotype_inference	1
heart	1
helical_phasing	1
heterogeneity	1
heterotachy	1
horizontal_transfer	1
illumina_beads	1
imprinting	1
inbred_lines	1
in_situ	1
integration	1
interval_mapping	1
intron	1
intron_evolution	1
in_vitro	1
in_vivo	1
karyotype	1
lethality	1
life	1
lineage	1
low_frequency	1
markov	1
massively_parallel_signature_sequencing	1
maternal	1
matrix	1
metazoan	1
micro_array	1
morphology	1
multi-copy	1
multiple_testing	1
mutational_load	1
natural_selection	1
natural_variation	1
neo-y	1
neural	1
next_gen_sequencing	1
noise	1
non-neutral	1
nonstationary	1
not_recommended	1
odorant	1
paleoecology	1
parallel_evolution	1
paralog	1
paralog_divergence	1
phenotype	1
phenotypic_effect	1
physical	1
pirna	1
plan	1
plants	1
post_transcriptional_modification	1
properties	1
protein_dna_interaction	1
qst	1
range	1
rapid	1
regular_expressions	1
response	1
rna_structure	1
rnp	1
rules	1
scaling	1
segmentation	1
semi_dominance	1
sequence_properties	1
sequencing_error	1
sequencing_technology	1
sex	1
short	1
similarity	1
simulation	1
slightly_deleterious_mutations	1
snp	1
solexa	1
sorting	1
specialization	1
sperm	1
splicing	1
steric_repression	1
strains	1
structural_variation	1
substitution_rate_variation	1
symbiont	1
synteny	1
targets	1
theory	1
threshold	1
timing	1
tissue_specific	1
tissue-specific	1
trait_covariance	1
trait_decomposition	1
tree_topology	1
tribolium	1
virilis	1
weak	1
x_inactivation	1
x_vs_autosomes	1
zygotic	1

dpollard's method [56 articles] Export

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