druvus's genome [at least 200 articles] Export

Recent papers added to druvus's library classified by the tag genome. You can also see everyone's genome.

	Genome wide evolutionary analyses reveal serotype specific patterns of positive selection in selected Salmonella serotypes [My Copy] BMC Evolutionary Biology, Vol. 9, No. 1. (14 November 2009), 264. by Yesim Soyer, Renato Orsi, Lorraine R. Rivera, Qi Sun, Martin Wiedmann posted to salmonella genome evolution by druvus on 2009-11-23 12:59:39 as
	The B73 Maize Genome: Complexity, Diversity, and Dynamics [My Copy] Science, Vol. 326, No. 5956. (20 November 2009), pp. 1112-1115. by Patrick S. Schnable, Doreen Ware, Robert S. Fulton, et al.Joshua C. Stein, Fusheng Wei, Shiran Pasternak, Chengzhi Liang, Jianwei Zhang, Lucinda Fulton, Tina A. Graves, Patrick Minx, Amy D. Reily, Laura Courtney, Scott S. Kruchowski, Chad Tomlinson, Cindy Strong, Kim Delehaunty, Catrina Fronick, Bill Courtney, Susan M. Rock, Eddie Belter, Feiyu Du, Kyung Kim, Rachel M. Abbott, Marc Cotton, Andy Levy, Pamela Marchetto, Kerri Ochoa, Stephanie M. Jackson, Barbara Gillam, Weizu Chen, Le Yan, Jamey Higginbotham, Marco Cardenas, Jason Waligorski, Elizabeth Applebaum, Lindsey Phelps, Jason Falcone, Krishna Kanchi, Thynn Thane, Adam Scimone, Nay Thane, Jessica Henke, Tom Wang, Jessica Ruppert, Neha Shah, Kelsi Rotter, Jennifer Hodges, Elizabeth Ingenthron, Matt Cordes, Sara Kohlberg, Jennifer Sgro, Brandon Delgado, Kelly Mead, Asif Chinwalla, Shawn Leonard, Kevin Crouse, Kristi Collura, Dave Kudrna, Jennifer Currie, Ruifeng He, Angelina Angelova, Shanmugam Rajasekar, Teri Mueller, Rene Lomeli, Gabriel Scara, Ara Ko, Krista Delaney, Marina Wissotski, Georgina Lopez, David Campos, Michele Braidotti, Elizabeth Ashley, Wolfgang Golser, HyeRan Kim, Seunghee Lee, Jinke Lin, Zeljko Dujmic, Woojin Kim, Jayson Talag, Andrea Zuccolo, Chuanzhu Fan, Aswathy Sebastian, Melissa Kramer, Lori Spiegel, Lidia Nascimento, Theresa Zutavern, Beth Miller, Claude Ambroise, Stephanie Muller, Will Spooner, Apurva Narechania, Liya Ren, Sharon Wei, Sunita Kumari, Ben Faga, Michael J. Levy, Linda McMahan, Peter Van Buren, Matthew W. Vaughn, Kai Ying, Cheng-Ting Yeh, Scott J. Emrich, Yi Jia, Ananth Kalyanaraman, An-Ping Hsia, W. Brad Barbazuk, Regina S. Baucom, Thomas P. Brutnell, Nicholas C. Carpita, Cristian Chaparro, Jer-Ming Chia, Jean-Marc Deragon, James C. Estill, Yan Fu, Jeffrey A. Jeddeloh, Yujun Han, Hyeran Lee, Pinghua Li, Damon R. Lisch, Sanzhen Liu, Zhijie Liu, Dawn H. Nagel, Maureen C. McCann, Phillip SanMiguel, Alan M. Myers, Dan Nettleton, John Nguyen, Bryan W. Penning, Lalit Ponnala, Kevin L. Schneider, David C. Schwartz, Anupma Sharma, Carol Soderlund, Nathan M. Springer, Qi Sun, Hao Wang, Michael Waterman, Richard Westerman, Thomas K. Wolfgruber, Lixing Yang, Yeisoo Yu, Lifang Zhang, Shiguo Zhou, Qihui Zhu, Jeffrey L. Bennetzen, R. Kelly Dawe, Jiming Jiang, Ning Jiang, Gernot G. Presting, Susan R. Wessler, Srinivas Aluru, Robert A. Martienssen, Sandra W. Clifton, W. Richard McCombie, Rod A. Wing, Richard K. Wilson posted to maize genome by druvus on 2009-11-23 12:56:32 as along with 2 people maren operon
	Genome reannotation of Escherichia coli CFT073 with new insights into virulence [My Copy] BMC Genomics, Vol. 10, No. 1. (2009), 552. by Chengwei Luo, Gang Q. Hu, Huaiqiu Zhu posted to genome ecoli annotation by druvus on 2009-11-23 12:40:54 as
	Genome sequence of a proteolytic (Group I) Clostridium botulinum strain Hall A and comparative analysis of the clostridial genomes. [My Copy] Genome research, Vol. 17, No. 7. (July 2007), pp. 1082-1092. by Mohammed Sebaihia, Michael W. Peck, Nigel P. Minton, et al.Nicholas R. Thomson, Matthew T. Holden, Wilfrid J. Mitchell, Andrew T. Carter, Stephen D. Bentley, David R. Mason, Lisa Crossman, Catherine J. Paul, Alasdair Ivens, Marjon H. Wells-Bennik, Ian J. Davis, Ana M. Cerdeño-Tárraga, Carol Churcher, Michael A. Quail, Tracey Chillingworth, Theresa Feltwell, Audrey Fraser, Ian Goodhead, Zahra Hance, Kay Jagels, Natasha Larke, Mark Maddison, Sharon Moule, Karen Mungall, Halina Norbertczak, Ester Rabbinowitsch, Mandy Sanders, Mark Simmonds, Brian White, Sally Whithead, Julian Parkhill posted to genome clostridium by druvus on 2009-11-09 09:28:15 as
	Flynet: a genomic resource for Drosophila melanogaster transcriptional regulatory networks. [My Copy] Bioinformatics (Oxford, England), Vol. 25, No. 22. (15 November 2009), pp. 3001-3004. by Feng Tian, Parantu K. Shah, Xiangjun Liu, et al.Nicolas Negre, Jia Chen, Oleksiy Karpenko, Kevin P. White, Robert L. Grossman posted to network genome database by druvus on 2009-11-04 15:30:36 as along with 2 people guhjy isimpson
	The genome of the cucumber, Cucumis sativus L. [My Copy] Nature Genetics, Vol. advance online publication (01 November 2009) by Sanwen Huang, Ruiqiang Li, Zhonghua Zhang, et al.Li Li, Xingfang Gu, Wei Fan, William J. Lucas, Xiaowu Wang, Bingyan Xie, Peixiang Ni, Yuanyuan Ren, Hongmei Zhu, Jun Li, Kui Lin, Weiwei Jin, Zhangjun Fei, Guangcun Li, Jack Staub, Andrzej Kilian, Edwin A. G. van der Vossen, Yang Wu, Jie Guo, Jun He, Zhiqi Jia, Yi Ren, Geng Tian, Yao Lu, Jue Ruan, Wubin Qian, Mingwei Wang, Quanfei Huang, Bo Li, Zhaoling Xuan, Jianjun Cao, Asan, Zhigang Wu, Juanbin Zhang, Qingle Cai, Yinqi Bai, Bowen Zhao, Yonghua Han, Ying Li, Xuefeng Li, Shenhao Wang, Qiuxiang Shi, Shiqiang Liu, Won K. Cho, Jae-Yean Kim, Yong Xu, Katarzyna Heller-Uszynska, Han Miao, Zhouchao Cheng, Shengping Zhang, Jian Wu, Yuhong Yang, Houxiang Kang, Man Li, Huiqing Liang, Xiaoli Ren, Zhongbin Shi, Ming Wen, Min Jian, Hailong Yang, Guojie Zhang, Zhentao Yang, Rui Chen, Shifang Liu, Jianwen Li, Lijia Ma, Hui Liu, Yan Zhou, Jing Zhao, Xiaodong Fang, Guoqing Li, Lin Fang, Yingrui Li, Dongyuan Liu, Hongkun Zheng, Yong Zhang, Nan Qin, Zhuo Li, Guohua Yang, Shuang Yang, Lars Bolund, Karsten Kristiansen, Hancheng Zheng, Shaochuan Li, Xiuqing Zhang, Huanming Yang, Jian Wang, Rifei Sun, Baoxi Zhang, Shuzhi Jiang, Jun Wang, Yongchen Du, Songgang Li posted to plant genome by druvus on 2009-11-02 16:38:47 as along with 3 people and 1 group ppgardne kiekyon natstreet Journal picks
	G-compass: A web-based comparative genome browser between human and other vertebrate genomes [My Copy] Bioinformatics (21 October 2009), btp594. by Yoshihiro Kawahara, Ryuichi Sakate, Akihiro Matsuya, et al.Katsuhiko Murakami, Yoshiharu Sato, Hao Zhang, Takashi Gojobori, Takeshi Itoh, Tadashi Imanishi posted to genome browser by druvus on 2009-10-22 10:38:16 as along with 4 people idonaldson kshameer operon neils
	Genome Annotation Transfer Utility (GATU): rapid annotation of viral genomes using a closely related reference genome [My Copy] BMC Genomics, Vol. 7, No. 1. (13 June 2006), 150. by Vasily Tcherepanov, Angelika Ehlers, Chris Upton posted to software genome annotation by druvus on 2009-10-21 15:07:48 as along with 1 person and 1 group vwchan beta
	The genome BLASTatlas-a GeneWiz extension for visualization of whole-genome homology [My Copy] Mol. BioSyst., Vol. 4, No. 5. (May 2008), pp. 363-371. by Peter F. Hallin, Tim T. Binnewies, David W. Ussery posted to visualisation homology genome blast by druvus on 2009-10-21 08:54:15 as along with 1 person guhjy
	The Genome Sequence of Wolbachia endosymbiont of Culex quinquefasciatus JHB. [My Copy] Journal of bacteriology (29 December 2008) by Steven L L. Salzberg, Daniela Puiu, Daniel D D. Sommer, Vish Nene, Norman H H. Lee posted to genome announcement by druvus on 2009-10-20 14:10:10 as along with 1 person and 1 group jonathaneisen iSEEM
	Genome Sequence of the Probiotic Bacterium Bifidobacterium animalis subsp. lactis AD011triangledown [My Copy] J. Bacteriol., Vol. 191, No. 6. (15 March 2009), 1995. by Jihyun F. Kim, Haeyoung Jeong, Dong S. Yu, et al.Sang-Haeng Choi, Cheol-Goo Hur, Myeong-Soo Park, Sung H. Yoon, Dae-Won Kim, Geun E. Ji, Hong-Seog Park, Tae K. Oh posted to sequence genome announcement by druvus on 2009-10-20 14:08:40 as
	Tracking the in vivo evolution of multidrug resistance in Staphylococcus aureus by whole-genome sequencing [My Copy] Proceedings of the National Academy of Sciences, Vol. 104, No. 22. (29 May 2007), pp. 9451-9456. by Michael M. Mwangi, Shang W. Wu, Yanjiao Zhou, et al.Krzysztof Sieradzki, Herminia de Lencastre, Paul Richardson, David Bruce, Edward Rubin, Eugene Myers, Eric D. Siggia, Alexander Tomasz posted to next_generation genome evolution by druvus on 2009-10-20 12:35:54 as along with 4 people gwenknight lewista aprasad Xavier
	An evaluation of Comparative Genome Sequencing (CGS) by comparing two previously-sequenced bacterial genomes [My Copy] BMC Genomics, Vol. 8, No. 1. (14 August 2007), 274. by Christopher Herring, Bernhard Palsson posted to next_generation genome comperative_genomics bacteria by druvus on 2009-10-20 12:34:25 as along with 1 person niallhaslam
	Analysis of genetic systems using experimental evolution and whole-genome sequencing. [My Copy] Genome biology, Vol. 8, No. 1. (01 February 2007), 201. by Matthew Hegreness, Roy Kishony posted to next_generation genome evolution by druvus on 2009-10-20 12:32:38 as along with 1 person sameersoi
	Deciphering the genetic basis for polyketide variation among mycobacteria producing mycolactones [My Copy] BMC Genomics, Vol. 9, No. 1. (07 October 2008), 462. by Sacha Pidot, Hui Hong, Torsten Seemann, et al.Jessica Porter, Marcus Yip, Artem Men, Matthew Johnson, Peter Wilson, John Davies, Peter Leadlay, Timothy Stinear posted to genome bacteria by druvus on 2009-10-15 12:24:19 as
	ABWGAT: Anchor Based Whole Genome Analysis Tool. [My Copy] Bioinformatics (14 October 2009), btp587. by Sarbashis Das, Anchal Vishnoi, Alok Bhattacharya posted to indel genome alignment by druvus on 2009-10-15 10:51:55 as along with 1 person natstreet
	A survey of bacterial insertion sequences using IScan [My Copy] Nucl. Acids Res., Vol. 35, No. 16. (13 August 2007), pp. 5284-5293. by Andreas Wagner, Christopher Lewis, Manuel Bichsel posted to software genome by druvus on 2009-10-14 12:50:07 as along with 1 person operon
	Comprehensive mutation identification in an evolved bacterial cooperator and its cheating ancestor [My Copy] PNAS, Vol. 103, No. 21. (23 May 2006), pp. 8107-8112. by Gregory J. Velicer, GÃ¼nter Raddatz, Heike Keller, et al.Silvia Deiss, Christa Lanz, Iris Dinkelacker, Stephan C. Schuster posted to genome evolution by druvus on 2009-10-14 09:25:08 as along with 2 people and 1 group cambray stevanspringer FAB-lab
	Dynamics of adaptation and diversification: a 10,000-generation experiment with bacterial populations [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 91, No. 15. (19 July 1994), pp. 6808-6814. by R. E. Lenski, M. Travisano posted to genome evolution ecoli by druvus on 2009-10-14 09:24:34 as along with 4 people Naraoia jmeppley RMGraze redelings
	Contribution of individual random mutations to genotype-by-environment interactions in Escherichia coli [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 98, No. 20. (25 September 2001), pp. 11388-11393. by Susanna K. Remold, Richard E. Lenski posted to mutation genome environmental ecoli by druvus on 2009-10-14 09:24:07 as
	Tracing Ancestors and Relatives of Escherichia coli B, and the Derivation of B Strains REL606 and BL21(DE3) [My Copy] Journal of Molecular Biology (15 September 2009) by Patrick Daegelen, F. William Studier, Richard E. Lenski, Susan Cure, Jihyun F. Kim posted to genome evolution ecoli by druvus on 2009-10-14 09:20:30 as
	Understanding the Differences between Genome Sequences of Escherichia coli B Strains REL606 and BL21(DE3) and Comparison of the E. coli B and K-12 Genomes [My Copy] Journal of Molecular Biology, Vol. 394, No. 4. (11 December 2009), pp. 653-680. by F. William Studier, Patrick Daegelen, Richard E. Lenski, Sergei Maslov, Jihyun F. Kim posted to genome evolution ecoli by druvus on 2009-10-14 09:20:08 as along with 1 person mmourez
	Genome Sequences of Escherichia coli B strains REL606 and BL21(DE3) [My Copy] Journal of Molecular Biology, Vol. 394, No. 4. (11 December 2009), pp. 644-652. by Haeyoung Jeong, Valérie Barbe, Choong H. Lee, et al.David Vallenet, Dong S. Yu, Sang-Haeng Choi, Arnaud Couloux, Seung-Won Lee, Sung H. Yoon, Laurence Cattolico posted to genome evolution ecoli by druvus on 2009-10-14 09:19:48 as along with 1 person mmourez
	Efficient Estimation of Pairwise Distances between Genomes [My Copy] Bioinformatics (13 October 2009), btp590. by Mirjana Domazet-Loso, Bernhard Haubold posted to genome distance alignment by druvus on 2009-10-14 09:04:02 as
	Independent evolution of neurotoxin and flagellar genetic loci in proteolytic Clostridium botulinum [My Copy] BMC Genomics, Vol. 10, No. 1. (19 March 2009), 115. by Andrew Carter, Catherine Paul, David Mason, et al.Susan Twine, Mark Alston, Susan Logan, John Austin, Michael Peck posted to genome evolution clostridium by druvus on 2009-10-13 10:11:42 as along with 1 person Blobman
	Recombination and insertion events involving the botulinum neurotoxin complex genes in Clostridium botulinum types A, B, E and F and Clostridium butyricum type E strains [My Copy] BMC Biology, Vol. 7, No. 1. (05 October 2009), 66. by Karen Hill, Gary Xie, Brian Foley, et al.Theresa Smith, Amy Munk, David Bruce, Leonard Smith, Thomas Brettin, John Detter posted to recombination genome clostridium by druvus on 2009-10-13 10:11:21 as
	Using RSAT to scan genome sequences for transcription factor binding sites and cis-regulatory modules. [My Copy] Nature protocols, Vol. 3, No. 10. (18 September 2008), pp. 1578-1588. by Jean-Valery V. Turatsinze, Morgane Thomas-Chollier, Matthieu Defrance, Jacques van Helden posted to tf motif genome cis by druvus on 2009-10-12 17:01:52 as along with 7 people and 1 group kshameer isimpson heliopais fhsantanna polivares idonaldson natstreet BergmanLab
	Genome-wide comparative analysis of the Brassica rapa gene space reveals genome shrinkage and differential loss of duplicated genes after whole genome triplication [My Copy] Genome Biology, Vol. 10, No. 10. (2009), R111. by Jeong H. Mun, Soo J. Kwon, Tae J. Yang, et al.Young J. Seol, Mina Jin, Jin A. Kim, Myung H. Lim, Jung S. Kim, Seunghoon Baek, Beom S. Choi, Hee J. Yu, Dae S. Kim, Namshin Kim, Ki B. Lim, Soo I. Lee, Jang H. Hahn, Yong P. Lim, Ian Bancroft, Beom S. Park posted to genome duplicated comperative_genomics brassica by druvus on 2009-10-12 16:40:02 as along with 3 people venancio mtruksa dandaman
	Genome Project Standards in a New Era of Sequencing [My Copy] Science, Vol. 326, No. 5950. (9 October 2009), pp. 236-237. by P. S. G. Chain, D. V. Grafham, R. S. Fulton, et al.M. G. FitzGerald, J. Hostetler, D. Muzny, J. Ali, B. Birren, D. C. Bruce, C. Buhay, J. R. Cole, Y. Ding, S. Dugan, D. Field, G. M. Garrity, R. Gibbs, T. Graves, C. S. Han, S. H. Harrison, S. Highlander, P. Hugenholtz, H. M. Khouri, C. D. Kodira, E. Kolker, N. C. Kyrpides, D. Lang, A. Lapidus, S. A. Malfatti, V. Markowitz, T. Metha, K. E. Nelson, J. Parkhill, S. Pitluck, X. Qin, T. D. Read, J. Schmutz, S. Sozhamannan, P. Sterk, R. L. Strausberg, G. Sutton, N. R. Thomson, J. M. Tiedje, G. Weinstock, A. Wollam, Genomic Standards Consortium Human Microbiome Project Jumpstart Consortium, J. C. Detter posted to next_generation genome by druvus on 2009-10-12 10:55:51 as along with 7 people and 2 groups seb1 jgill balajis ppgardne reyez ArtemPankin daforerog Journal picks Khavkin's lab
	NeMeSys: a biological resource for narrowing the gap between sequence and function in the human pathogen Neisseria meningitidis [My Copy] Genome Biology, Vol. 10, No. 10. (09 October 2009), R110. by Christophe Rusniok, David Vallenet, Stephanie Floquet, et al.Helen Ewles, Coralie M. Soulama, Daniel Brown, Aurelie Lajus, Carmen Buchrieser, Claudine Medigue, Philippe Glaser, Vladimir Pelicic posted to sequence pathogen genome by druvus on 2009-10-12 10:05:34 as
	Global characterization of Artemisia annua glandular trichome transcriptome using 454 pyrosequencing. [My Copy] BMC genomics, Vol. 10, No. 1. (9 October 2009), 465. by Wei Wang, Yejun Wang, Qing Zhang, Yan Qi, Dianjing Guo posted to rna-seq plant next_generation genome by druvus on 2009-10-12 10:05:12 as along with 1 person and 1 group ppgardne Journal picks
	The word landscape of the non-coding segments of the Arabidopsis thaliana genome [My Copy] BMC Genomics, Vol. 10, No. 1. (08 October 2009), 463. by Jens Lichtenberg, Alper Yilmaz, Joshua Welch, et al.Kyle Kurz, Xiaoyu Liang, Frank Drews, Klaus Ecker, Stephen Lee, Matt Geisler, Erich Grotewold, Lonnie Welch posted to pattern genome arabidopsis by druvus on 2009-10-12 10:04:41 as along with 2 people lichtenj natstreet
	Genomic Diversity and Evolution of Mycobacterium ulcerans Revealed by Next-Generation Sequencing [My Copy] PLoS Pathog, Vol. 5, No. 9. (11 September 2009), e1000580. by Weihong Qi, Michael Käser, Katharina Röltgen, Dorothy Yeboah-Manu, Gerd Pluschke posted to next_generation mycobacterium genome by druvus on 2009-10-07 15:51:24 as along with 2 people maren n00c
	Estimating Mutation Distances from Unaligned Genomes [My Copy] Journal of Computational Biology, Vol. 16, No. 10. (October 2009), pp. 1487-1500. by Bernhard Haubold, Peter Pfaffelhuber, Mirjana Domazet-Los˘o, Thomas Wiehe posted to genome alignment-free by druvus on 2009-10-07 11:00:06 as
	Intracellular pathogens go extreme: genome evolution in the Rickettsiales. [My Copy] Trends Genet, Vol. 23, No. 10. (October 2007), pp. 511-520. by A. C. Darby, N. H. Cho, H. H. Fuxelius, J. Westberg, S. G. Andersson posted to rickettsia review genome evolution by druvus on 2009-10-06 16:26:43 as along with 3 people johanviklund treangen operon
	Evidence of extensive homologous recombination in the core genome of rickettsia. [My Copy] Comparative and functional genomics (2009) by J. Wu, T. Yu, Q. Bao, F. Zhao posted to rickettsia rearrangement genome by druvus on 2009-10-06 16:19:18 as along with 1 person nyyu
	An Integrative Method for Accurate Comparative Genome Mapping [My Copy] PLoS Comput Biol, Vol. 2, No. 8. (4 August 2006), e75. by Firas Swidan, Eduardo P. C. Rocha, Michael Shmoish, Ron Y. Pinter posted to statistics mapping genome by druvus on 2009-10-06 16:10:26 as along with 2 people and 1 group natstreet indigoviolet EisenLab
	Whole-genome comparison of disease and carriage strains provides insights into virulence evolution in Neisseria meningitidis [My Copy] Proceedings of the National Academy of Sciences, Vol. 105, No. 9. (4 March 2008), pp. 3473-3478. by Christoph Schoen, Jochen Blom, Heike Claus, et al.Anja Schramm-GlÃ¼ck, Petra Brandt, Tobias MÃ¼ller, Alexander Goesmann, Biju Joseph, Sebastian Konietzny, Oliver Kurzai, Corinna Schmitt, Torben Friedrich, Burkhard Linke, Ulrich Vogel, Matthias Frosch posted to virulence genome evolution by druvus on 2009-10-06 16:08:40 as along with 2 people and 1 group azazello martainn gatech-compgenomics
	ROBIN: a tool for genome rearrangement of block-interchanges [My Copy] Bioinformatics, Vol. 21, No. 11. (1 June 2005), pp. 2780-2782. by Chin L. Lu, Tsui C. Wang, Ying C. Lin, Chuan Y. Tang posted to software rearrangement genome by druvus on 2009-10-06 16:08:11 as along with 3 people natstreet GustavoLacerda operon
	Evolution at the nucleotide level: the problem of multiple whole-genome alignment [My Copy] Hum. Mol. Genet., Vol. 15, No. suppl_1. (15 April 2006), pp. R51-56. by Colin N. Dewey, Lior Pachter posted to genome evolution by druvus on 2009-10-06 16:06:59 as along with 9 people and 2 groups skembel treangen operon Ayest tny dchughes AaronDarling echinotrix Neeperando G4ID Genetics-of-Gambling
	Genome-wide detection and analysis of homologous recombination among sequenced strains of Escherichia coli [My Copy] Genome Biology, Vol. 7, No. 5. (31 May 2006), R44. by Bob Mau, Jeremy Glasner, Aaron Darling, Nicole Perna posted to recombination genome ecoli by druvus on 2009-10-06 16:03:29 as along with 3 people jmeppley AaronDarling vplagnol
	Identifying Evolutionarily Conserved Segments Among Multiple Divergent and Rearranged Genomes [My Copy] Comparative Genomics (2005), pp. 72-84. by Bob Mau, Aaron E. Darling, Nicole T. Perna posted to synteny genome evolution by druvus on 2009-10-06 15:58:01 as
	GRIL: genome rearrangement and inversion locator [My Copy] Bioinformatics, Vol. 20, No. 1. (1 January 2004), pp. 122-124. by Aaron E. Darling, Bob Mau, Frederick R. Blattner, Nicole T. Perna posted to genome alignment by druvus on 2009-10-06 15:56:50 as along with 4 people operon aprasad AaronDarling treangen
	Genome aliquoting with double cut and join [My Copy] BMC Bioinformatics, Vol. 10, No. Suppl 1. (2009), S2. by Robert Warren, David Sankoff posted to rearrangement genome duplication by druvus on 2009-10-06 15:56:03 as
	ASAP: a resource for annotating, curating, comparing, and disseminating genomic data [My Copy] Nucl. Acids Res., Vol. 34, No. suppl_1. (1 January 2006), pp. D41-45. by Jeremy D. Glasner, Michael Rusch, Paul Liss, et al.Guy Plunkett, Eric L. Cabot, Aaron Darling, Bradley D. Anderson, Paul Infield-Harm, Michael C. Gilson, Nicole T. Perna posted to synteny software genome browser by druvus on 2009-10-06 15:46:21 as along with 1 person AaronDarling
	PatternHunter: faster and more sensitive homology search [My Copy] Bioinformatics, Vol. 18, No. 3. (1 March 2002), pp. 440-445. by Bin Ma, John Tromp, Ming Li posted to synteny homology genome by druvus on 2009-10-06 15:42:15 as along with 10 people maria_hauser mmartin umit nuke2005 catmat treangen natstreet nedwards DickSilver bozdagd
	Efficient Sampling of Parsimonious Inversion Histories with Application to Genome Rearrangement in Yersinia [My Copy] Genome Biol Evol, Vol. 2009, No. 0. (14 July 2009), pp. 153-164. by Istvan Miklos, Aaron E. Darling posted to rearrangement pestis genome by druvus on 2009-10-06 15:39:39 as
	Draft genome sequence of the Daphnia pathogen Octosporea bayeri: insights into the gene content of a large microsporidian genome and a model for host-parasite interactions. [My Copy] Genome biology, Vol. 10, No. 10. (6 October 2009), R106. by Nicolas Corradi, Karen L. Haag, Jean-Francois F. Pombert, Dieter Ebert, Patrick J. Keeling posted to genome daphnia by druvus on 2009-10-06 15:16:34 as
	The phusion assembler. [My Copy] Genome research, Vol. 13, No. 1. (January 2003), pp. 81-90. by James C. Mullikin, Zemin Ning posted to genome assembly by druvus on 2009-10-02 17:46:53 as along with 5 people natstreet bpb wenhan dmc azazello
	nGASP - the nematode genome annotation assessment project [My Copy] BMC Bioinformatics, Vol. 9, No. 1. (19 December 2008), 549. by Avril Coghlan, Tristan Fiedler, Sheldon McKay, et al.Paul Flicek, Todd Harris, Darin Blasiar, the nGASP Consortium, Lincoln Stein posted to genome annotation by druvus on 2009-09-30 14:57:12 as along with 3 people rshe ajbattle sujaikumar

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genome	394
software	378
evolution	281
phylogeny	270
statistics	221
review	211
bacteria	188
database	176
francisella	165
proteome	160
repeat	158
next_generation	150
plant	140
tandem	124
alignment	120
marker	106
network	104
annotation	101
semantic	97
wms	95
bioinformatics	90
population	89
tf	83
comperative_genomics	82
populus	80
sequence	80
mirna	69
gene	67
genetics	66
algorithm	60
visualisation	59
classification	58
snp	58
pathogen	56
assembly	55
microarray	54
arabidopsis	52
r	52
web_20	51
sequencing	50
est	47
pipeline	47
predictions	44
mapping	40
genetic	39
pcr	39
synthetic_biology	39
indel	37
ecoli	36
model	36
distance	35
mutation	35
454	34
likelihood	33
ortholog	33
taverna	33
motif	32
metagenomics	31
ontology	31
bayesian	30
family	30
references	30
wiki	30
coalescent	29
rice	27
clustering	26
expression	26
browser	25
simulation	25
ssr	25
microbial_forensics	23
biodefense	22
domain	21
synteny	21
tom	21
selection	20
srna	20
testing	20
genomics	19
gmod	19
duplication	18
mycobacterium	18
own_publications	18
polymorphism	18
stress	18
target	18
bacillus	17
pathway	16
promoter	16
book	15
homology	15
multivariate	15
environmental	14
primer	14
virulence	14
blast	13
comment	13
prokaryote	13
vntr	13
co-regulated	12
geography	12
hmm	12
ricinus	12
semantic_web	12
solexa	12
transcription	12
binding	11
clostridium	11
datasharing	11
development	11
human	11
mitocondria	11
mvla	11
recombination	11
anthrax	10
cis	10
das	10
drosophila	10
eukaryote	10
pangenome	10
parallel	10
pubmed	10
repeats	10
bioconductor	9
curation	9
cytoscape	9
metabolomics	9
module	9
spatial	9
virus	9
writing	9
grid	8
indels	8
rdf	8
rna-seq	8
systems_biology	8
web_service	8
alignment-free	7
biomoby	7
consensus	7
coxiella	7
forensics	7
illumina	7
insilico	7
island	7
ncrna	7
open-access	7
pestis	7
qtl	7
text-mining	7
yeast	7
coexpression	6
fish	6
genbank	6
grape	6
mlst	6
opinion	6
organisation	6
paralog	6
report	6
species	6
standard	6
svm	6
transposon	6
biomart	5
chloroplast	5
design	5
evaluation	5
framework	5
image	5
interaction	5
knowledgebase	5
machine_learning	5
markov	5
mlva	5
prediction	5
rickettsia	5
rna	5
sirna	5
tularemia	5
authorship	4
cloud	4
disease	4
divergence	4
duplicated	4
fungal	4
leaf	4
management	4
medicago	4
mygrid	4
normalization	4
open_source	4
q-fever	4
rearrangement	4
soil	4
teaching	4
tomato	4
toxin	4
web	4
16s	3
adaptation	3
ancestral	3
association_mapping	3
biofuel	3
chip-seq	3
clonal	3
genotype	3
grass	3
knowledge	3
languange	3
maize	3
markers	3
mesh	3
molecular	3
pattern	3
pca	3
phenotype	3
philomiragia	3
php	3
phylogenomics	3
phytoremediation	3
pooling	3
pseudogenes	3
python	3
sharing	3
signature	3
soybean	3
splicing	3
stratification	3
structure	3
taxonomy	3
tissue	3
tularaemia	3
uorf	3
announcement	2
barcode	2
base_calling	2
biomass	2
blog	2
chado	2
cloning	2
codeigniter	2
comunity	2
correlation	2
cotton	2
crispr	2
datamining	2
detection	2
drupal	2
education	2
endophyte	2
endosymbiont	2
enrichment	2
eucalyptus	2
fitness	2
full-length	2
fungi	2
gene_ontology	2
genetical_genomics	2
genomic	2
gsea	2
holartica	2
hormone	2
indexing	2
kegg	2
kernel	2
lab_book	2
linkage_disequilibrium	2
linux	2
mapman	2
meta-analysis	2
metapopulation	2
migration	2
mouse	2
mutant	2
mutants	2
mutual_information	2
non-coding	2
ontologies	2
owl	2
perl	2
photosynthesis	2
plants	2
plasmid	2
polyploid	2
pulsed-field	2
quality_data	2
regulon	2
rest	2
rnai	2
salmonella	2
schu	2
spruce	2
timeserie	2
vector	2
venn	2
web_services	2
xml	2
affymetrix	1
aflp	1
agents	1
alfresco	1
alias	1
anthocyanin	1
apple	1
artemis	1
artifacts	1
automation	1
barley	1
benchmark	1
bias	1
biosecurity	1
biotic	1
bisulphite	1
brassica	1
brucella	1
c	1
cantonensis	1
caps	1
career	1
cassava	1
co2	1
coding	1
collaborations	1
community_intelligence	1
condor	1
convert	1
daphnia	1
dart	1
de_novo	1
distane	1
diversity	1
endophyt	1
ensembl	1
fdr	1
ft_ir	1
funding	1
future_plans	1
fuzzy	1
gbrowse	1
genes	1
geneticics	1
genomis	1
gis	1
gmo	1
gpu	1
gramene	1
gwa	1
horizontal_gene_transfer	1
humal	1
human_genome	1
i	1
impact	1
imputation	1
integration	1
intermine	1
intron	1
iron_limitation	1
isolation	1
its	1
java	1
knowledge_management	1
linear_models	1
lrt	1
malaria	1
matlab	1
mcl	1
mediawiki	1
membrane	1
metal	1
methods	1
methylation	1
microbial_communities	1
microscope	1
mir-396	1
moby	1
mod	1
modules	1
mosquito	1
mosquitoes	1
mrna	1
mutation_rate	1
novicida	1
nucleotide	1
oligo	1
opls	1
orthology	1
parser	1
pce	1
peptide	1
pfam	1
phy	1
pine	1
pinus	1
probabilistic	1
protease	1
proteat	1
proteom	1
provenance	1
psbs	1
pseudomonas	1
real_time_pcr	1
refseq	1
rflp	1
ribosome	1
rosids	1
rrecombination	1
ruby	1
scientometrics	1
script	1
seldi	1
senescence	1
sequenceing	1
snv	1
soap	1
sql	1
statistic	1
sunflower	1
symfony	1
tantem	1
ticks	1
transfac	1
transposition	1
tularensis	1
vaccine	1
validation	1
viewer	1
visualsisation	1
wgcna	1
wheat	1
wolbachia	1

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