druvus's watchlist [more than 800 articles] Export

Recent papers matching druvus's watchlist criteria

	Allelic imbalance sequencing reveals that single-nucleotide polymorphisms frequently alter microRNA-directed repression [My Copy] Nature Biotechnology, Vol. 27, No. 5. (26 April 2009), pp. 472-477. by Jinkuk Kim, David P. Bartel posted to snp mirna_regulation mirna by jfr to the group microRNA on 2009-11-08 23:34:10 as along with 7 people guhjy fenghezi giovanni jbhiatt daforerog samgj valeriehilgers
	Prediction of guide strand of microRNAs from its sequence and secondary structure [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (09 April 2009), 105. by Firoz Ahmed, Hifzur Ansari, Gajendra Raghava posted to mirna by jfr to the group microRNA on 2009-11-08 22:58:14 as along with 3 people homonecloco raventhorn86 samgj
	Small RNA: A Large Contributor to Carcinogenesis? [My Copy] Journal of Gastrointestinal Surgery, Vol. 13, No. 7. (1 July 2009), pp. 1379-1388. by Imran Bhatti, Andrew Lee, Jonathan Lund, Michael Larvin posted to review mirna by jfr to the group microRNA on 2009-11-08 22:14:40 as along with 1 person guhjy
	dbSMR: a novel resource of genome-wide SNPs affecting microRNA mediated regulation [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (2009), 108. by Manoj Hariharan, Vinod Scaria, Samir Brahmachari posted to snp mirna_regulation mirna database by jfr to the group microRNA on 2009-11-08 22:08:30 as along with 6 people songpku guhjy pengchy daforerog lwaldron ealloza
	miR-519 reduces cell proliferation by lowering RNA-binding protein HuR levels. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 105, No. 51. (23 December 2008), pp. 20297-20302. by Kotb Abdelmohsen, Subramanya Srikantan, Yuki Kuwano, Myriam Gorospe posted to rna_binding_protein mir-519 microrna hur by tonamswish to the group microRNA on 2009-11-06 15:17:23 as along with 1 person valeriehilgers
	Sequence context outside the target region influences the effectiveness of miR-223 target sites in the RhoB 3'UTR [My Copy] Nucl. Acids Res. (22 October 2009), gkp870. by Guihua Sun, Haitang Li, John J. Rossi posted to rhob mir-223 microrna by tonamswish to the group microRNA on 2009-11-06 13:42:54 as
	Downregulation of miR-193b contributes to enhance urokinase-type plasminogen activator (uPA) expression and tumor progression and invasion in human breast cancer [My Copy] Oncogene, Vol. 28, No. 44. (24 August 2009), pp. 3937-3948. by X. F. Li, P. J. Yan, Z. M. Shao posted to upa mir-193b micrornaarray microrna invasion breast_cancer by tonamswish to the group microRNA on 2009-11-05 14:38:52 as
	MicroRNAs: small RNAs with a big role in gene regulation [My Copy] Nature Reviews Genetics, Vol. 5, No. 7. (01 July 2004), pp. 522-531. by Lin He, Gregory J. Hannon posted to review microrna by heliopais to the group microRNA on 2009-11-05 14:31:04 as along with 8 people GeeSharpMinor fishtank vvoorr guhjy jfr dchughes ealloza cerami
	Redefining MicroRNA Targets [My Copy] Vol. 19, No. 10. (26 May 2009), pp. 870-873. by Hervé Seitz posted to mirna_target mirna comment by jfr to the group microRNA on 2009-11-04 10:26:58 as along with 1 person hrogers
	Evidence for Antisense Transcription Associated with MicroRNA Target mRNAs in Arabidopsis [My Copy] PLoS Genet, Vol. 5, No. 4. (17 April 2009), e1000457. by Qing-Jun Luo, Manoj P. Samanta, Fatih Köksal, et al.Jaroslav Janda, David W. Galbraith, Casey R. Richardson, Fangqian Ou-Yang, Christopher D. Rock posted to mirna_target mirna antisense by jfr to the group microRNA on 2009-11-04 10:19:32 as along with 2 people gdb pengchy
	Human microRNAs co-silence in well-separated groups and have different predicted essentialities. [My Copy] Bioinformatics (Oxford, England), Vol. 25, No. 8. (15 April 2009), pp. 1063-1069. by Gábor Boross, Katalin Orosz, Illés J. Farkas posted to mirna by jfr to the group microRNA on 2009-11-02 17:23:03 as along with 6 people and 1 group heliopais samgj shikin ealloza daforerog valeriehilgers BenosLab
	microPred: effective classification of pre-miRNAs for human miRNA gene prediction. [My Copy] Bioinformatics (Oxford, England), Vol. 25, No. 8. (15 April 2009), pp. 989-995. by Rukshan Batuwita, Vasile Palade posted to mirna by jfr to the group microRNA on 2009-11-02 17:19:54 as along with 5 people and 1 group guhjy neils lwaldron djkt daforerog Bioinformatics
	Relative contribution of sequence and structure features to the mRNA binding of Argonaute/EIF2CâmiRNA complexes and the degradation of miRNA targets [My Copy] Genome Research, Vol. 19, No. 11. (18 November 2009), pp. 2009-2020. by Jean Hausser, Markus Landthaler, Lukasz Jaskiewicz, Dimos Gaidatzis, Mihaela Zavolan posted to risc_precipitation microrna_target_prediction microrna by heliopais to the group microRNA on 2009-11-02 16:37:52 as along with 4 people toni_marco megraw valeriehilgers daforerog
	Bio-informatic trends for the determination of miRNA-target interactions in mammals. [My Copy] DNA and cell biology, Vol. 26, No. 5. (May 2007), pp. 353-360. by Jonathon Doran, William M. Strauss posted to software review mirna_target mirna by jfr to the group microRNA on 2009-11-02 15:46:32 as along with 2 people mtagaya maralena
	MicroRNomics: a newly emerging approach for disease biology. [My Copy] Physiological genomics, Vol. 33, No. 2. (22 April 2008), pp. 139-147. by Chunxiang Zhang posted to review mirna by jfr to the group microRNA on 2009-11-02 15:14:09 as along with 2 people yyby guhjy
	A computational screen for mouse signaling pathways targeted by microRNA clusters. [My Copy] RNA (New York, N.Y.), Vol. 14, No. 7. (29 July 2008), pp. 1276-1283. by Jianzhen Xu, Chiwai Wong posted to mirna_target mirna_cluster mirna by jfr to the group microRNA on 2009-11-02 15:12:20 as along with 7 people heliopais coela guhjy bootsy mtagaya maralena daforerog
	miRDB: a microRNA target prediction and functional annotation database with a wiki interface. [My Copy] RNA (New York, N.Y.), Vol. 14, No. 6. (21 June 2008), pp. 1012-1017. by Xiaowei Wang posted to wiki mirna_target mirna database by jfr to the group microRNA on 2009-11-02 15:10:32 as along with 5 people heliopais daforerog valeriehilgers guhjy bootsy
	Increased MicroRNA Activity in Human Cancers [My Copy] PLoS ONE, Vol. 4, No. 6. (25 June 2009), e6045. by Ariel Israel, Roded Sharan, Eytan Ruppin, Eithan Galun posted to tf mrnaarray microrna-mrna microrna bioinfo by tonamswish to the group microRNA on 2009-11-02 14:31:27 as along with 3 people guhjy frohike ealloza
	Concomitant suppression of three target genes can explain the impact of a microRNA on metastasis [My Copy] Genes & Development (29 October 2009) by Scott Valastyan, Nathan Benaich, Amelia Chang, Ferenc Reinhardt, Robert A. Weinberg posted to mir-31 microrna cancer by heliopais to the group microRNA on 2009-11-02 10:56:24 as along with 3 people songpku pattersonee valeriehilgers
	MicroRNA-661, a c/EBPalpha Target, Inhibits Metastatic Tumor Antigen 1 and Regulates Its Functions [My Copy] Cancer Res, Vol. 69, No. 14. (15 July 2009), pp. 5639-5642. by Sirigiri D. Reddy, Suresh B. Pakala, Kazufumi Ohshiro, Suresh K. Rayala, Rakesh Kumar posted to mta1 mir-661 microrna cancer by tonamswish to the group microRNA on 2009-10-30 20:36:53 as
	A Short Hairpin DNA Analogous to miR-125b Inhibits C-Raf Expression, Proliferation, and Survival of Breast Cancer Cells [My Copy] Molecular Cancer Research, Vol. 7, No. 10. (October 2009), pp. 1635-1644. by Marco H. Hofmann, Jochen Heinrich, Gerald Radziwil, Karin Moelling posted to raf mir-125b microrna cell_migration breast_cancer by tonamswish to the group microRNA on 2009-10-30 20:10:13 as
	Tissue and Process Specific microRNA–mRNA Co-Expression in Mammalian Development and Malignancy [My Copy] PLoS ONE, Vol. 4, No. 5. (5 May 2009), e5436. by Hongye Liu, Issac S. Kohane posted to tool microrna-mrna microrna bioinfo by tonamswish to the group microRNA on 2009-10-30 15:31:37 as along with 4 people gdb giovenko roys ealloza
	Ago-TNRC6 triggers microRNA-mediated decay by promoting two deadenylation steps. [My Copy] Nature structural & molecular biology (18 October 2009) by Chyi-Ying Y. Chen, Dinghai Zheng, Zhenfang Xia, Ann-Bin B. Shyu posted to tnrc6 microrna_modes_of_action microrna gw182 argonaute by heliopais to the group microRNA on 2009-10-30 10:16:37 as along with 2 people gbloeb valeriehilgers
	Absolute quantification of microRNAs by using a universal reference. [My Copy] RNA (New York, N.Y.) (27 October 2009) by Ute Bissels, Stefan Wild, Stefan Tomiuk, et al.Angela Holste, Markus Hafner, Thomas Tuschl, Andreas Bosio posted to normalization microrna-microarray microrna by heliopais to the group microRNA on 2009-10-30 10:05:37 as along with 1 person valeriehilgers
	Alternative Processing of Primary microRNA Transcripts by Drosha Generates 5′ End Variation of Mature microRNA [My Copy] PLoS ONE, Vol. 4, No. 10. (27 October 2009), e7566. by Haoquan Wu, Chunting Ye, Danielle Ramirez, N. Manjunath posted to microrna isomir drosha by heliopais to the group microRNA on 2009-10-30 09:59:21 as along with 3 people hrogers fishtank samgj
	Maturation of MicroRNA Is Hormonally Regulated by a Nuclear Receptor. [My Copy] Molecular cell, Vol. 36, No. 2. (23 October 2009), pp. 340-347. by Kaoru Yamagata, Sally Fujiyama, Saya Ito, et al.Takashi Ueda, Takuya Murata, Masanori Naitou, Ken-Ichi Takeyama, Yasuhiro Minami, Bert W. O'Malley, Shigeaki Kato posted to microrna-regulation microrna by heliopais to the group microRNA on 2009-10-29 18:50:52 as along with 2 people tonamswish valeriehilgers
	Chromatin poises miRNA- and protein-coding genes for expression. [My Copy] Genome research, Vol. 19, No. 10. (27 October 2009), pp. 1742-1751. by Artem Barski, Raja Jothi, Suresh Cuddapah, et al.Kairong Cui, Tae-Young Y. Roh, Dustin E. Schones, Keji Zhao posted to microrna high-throughput-sequencing by heliopais to the group microRNA on 2009-10-29 18:40:07 as along with 8 people and 1 group samgj polivares megraw inesdesantiago fpattyn djkt fenghezi idonaldson Neuroblastoma
	Identification of new microRNA genes and aberrant microRNA profiles in childhood acute lymphoblastic leukemia. [My Copy] Leukemia : official journal of the Leukemia Society of America, Leukemia Research Fund, U.K, Vol. 23, No. 2. (16 February 2009), pp. 313-322. by D. Schotte, J. C. Chau, G. Sylvester, et al.G. Liu, C. Chen, V. H. van der Velden, M. J. Broekhuis, T. C. Peters, R. Pieters, M. L. den Boer posted to mir-1979 mir-1975 microrna leukemia cancer by heliopais to the group microRNA on 2009-10-29 16:59:19 as along with 3 people tonamswish tibbitts samgj
	Understanding How miRNAs Post-Transcriptionally Regulate Gene Expression [My Copy] miRNA Regulation of the Translational Machinery (2010), pp. 1-20. by Marc R. Fabian, Thomas R. Sundermeier, Nahum Sonenberg posted to review microrna_modes_of_action microrna by heliopais to the group microRNA on 2009-10-29 14:36:23 as
	An integrated approach for experimental target identification of hypoxia-induced miR-210. [My Copy] The Journal of biological chemistry (13 October 2009) by Pasquale Fasanaro, Simona Greco, Maria Lorenzi, et al.Mario Pescatori, Maura Brioschi, Ritu Kulshreshtha, Cristina Banfi, Andrew Stubbs, George A. Calin, Mircea Ivan, Maurizio C. Capogrossi, Fabio Martelli posted to rna22 risc_precipitation mir-210 microrna hypoxia by heliopais to the group microRNA on 2009-10-29 14:33:01 as along with 2 people tonamswish guhjy
	A high throughput experimental approach to identify miRNA targets in human cells [My Copy] Nucl. Acids Res. (4 September 2009), gkp715. by Lu P. Tan, Erwin Seinen, Gerben Duns, et al.Debora de Jong, Ody C. M. Sibon, Sibrand Poppema, Bart-Jan Kroesen, Klaas Kok, Anke van den Berg posted to risc_precipitation microrna_target_prediction microrna by heliopais to the group microRNA on 2009-10-29 12:58:41 as along with 3 people daforerog guhjy pengchy
	New Tricks for Animal MicroRNAs: Targeting of Amino Acid Coding Regions at Conserved and Nonconserved Sites [My Copy] Cancer Res, Vol. 69, No. 8. (15 April 2009), pp. 3245-3248. by Isidore Rigoutsos posted to rna22 review microrna_target_prediction microrna by heliopais to the group microRNA on 2009-10-29 09:42:36 as along with 4 people tonamswish guhjy samgj daforerog
	miR-143 Interferes with ERK5 Signaling, and Abrogates Prostate Cancer Progression in Mice [My Copy] PLoS ONE, Vol. 4, No. 10. (26 October 2009), e7542. by Cyrielle Clapé, Vanessa Fritz, Corinne Henriquet, et al.Florence Apparailly, Pedro L. Fernandez, François Iborra, Christophe Avancès, Martin Villalba, Stéphane Culine, Lluis Fajas posted to prostate_cancer prostate mir-143 microrna erk5 by tonamswish to the group microRNA on 2009-10-28 14:57:16 as
	Hormonal Regulation of MicroRNA Biogenesis [My Copy] Vol. 36, No. 2. (23 October 2009), pp. 172-173. by Sara Macias, Gracjan Michlewski, Javier F. Cáceres posted to nuclear_receptors microrna hormone_receptor by tonamswish to the group microRNA on 2009-10-28 14:49:33 as
	Evaluation of a new high-dimensional miRNA profiling platform [My Copy] BMC Medical Genomics, Vol. 2, No. 1. (27 August 2009), 57. by Julie Cunningham, Ann Oberg, Pedro Borralho, et al.Betsy Kren, Amy French, Liang Wang, Brian Bot, Bruce Morlan, Kevin Silverstein, Rod Staggs, Yan Zeng, Anne F. Lamblin, Christopher Hilker, Jian B. Fan, Clifford Steer, Stephen Thibodeau posted to microrna_microarray microrna by heliopais to the group microRNA on 2009-10-26 15:20:10 as along with 2 people fenghezi guhjy
	Abundant and dynamically expressed miRNAs, piRNAs, and other small RNAs in the vertebrate Xenopus tropicalis [My Copy] Genome Research, Vol. 19, No. 10. (23 October 2009), pp. 1766-1775. by Javier Armisen, Michael J. Gilchrist, Anna Wilczynska, Nancy Standart, Eric A. Miska posted to microrna-expression microrna frog by heliopais to the group microRNA on 2009-10-26 14:10:10 as along with 1 person samgj
	Targeting microRNAs in obesity. [My Copy] Expert opinion on therapeutic targets, Vol. 13, No. 10. (October 2009), pp. 1227-1238. by Huangming Xie, Lei Sun, Harvey F. Lodish posted to obesity microrna by heliopais to the group microRNA on 2009-10-24 15:20:51 as
	Bioinformatic analysis of microRNA biogenesis and function related proteins in eleven animal genomes. [My Copy] Journal of genetics and genomics = Yi chuan xue bao, Vol. 36, No. 10. (October 2009), pp. 591-601. by Xiuying Liu, GuanZheng Luo, Xiujuan Bai, Xiu-Jie J. Wang posted to microrna-biogenesis microrna by heliopais to the group microRNA on 2009-10-23 15:10:18 as along with 2 people daforerog samgj
	A TARBP2 mutation in human cancer impairs microRNA processing and DICER1 function [My Copy] Nature Genetics, Vol. 41, No. 3. (15 February 2009), pp. 365-370. by Sonia A. Melo, Santiago Ropero, Catia Moutinho, et al.Lauri A. Aaltonen, Hiroyuki Yamamoto, George A. Calin, Simona Rossi, Agustin F. Fernandez, Fatima Carneiro, Carla Oliveira, Bibiana Ferreira, Chang-Gong Liu, Alberto Villanueva, Gabriel Capella, Simo Schwartz Jr, Ramin Shiekhattar, Manel Esteller posted to tarbp2 microrna dicer by heliopais to the group microRNA on 2009-10-23 11:08:32 as along with 3 people Terkko valeriehilgers daforerog
	Transactivation of miR-34a by p53 Broadly Influences Gene Expression and Promotes Apoptosis [My Copy] Molecular Cell, Vol. 26, No. 5. (08 June 2007), pp. 745-752. by Tsung-Cheng Chang, Erik A. Wentzel, Oliver A. Kent, et al.Kalyani Ramachandran, Michael Mullendore, Kwang H. Lee, Georg Feldmann, Munekazu Yamakuchi, Marcella Ferlito, Charles J. Lowenstein posted to mir-34 microrna by heliopais to the group microRNA on 2009-10-23 11:03:42 as along with 2 people danaiancu maralena
	Molecular characterization of human Argonaute-containing ribonucleoprotein complexes and their bound target mRNAs. [My Copy] RNA (New York, N.Y.), Vol. 14, No. 12. (December 2008), pp. 2580-2596. by Markus Landthaler, Dimos Gaidatzis, Andrea Rothballer, et al.Po Yu Y. Chen, Steven Joseph J. Soll, Lana Dinic, Tolulope Ojo, Markus Hafner, Mihaela Zavolan, Thomas Tuschl posted to microrna_target microrna ago by tonamswish to the group microRNA on 2009-10-23 05:16:23 as along with 5 people guhjy hcoller pengchy valeriehilgers ealloza
	Intrinsic noise in post-transcriptional gene regulation by small non-coding RNA [My Copy] Biophysical Chemistry, Vol. 143, No. 1-2. (5 July 2009), pp. 60-69. by Ya Jia, Wangheng Liu, Anbang Li, Lijian Yang, Xuan Zhan posted to microrna-mathematical-model microrna by heliopais to the group microRNA on 2009-10-22 17:51:50 as along with 1 person erel10
	Oscillatory dynamics in a simple gene regulatory network mediated by small RNAs [My Copy] Physica A: Statistical Mechanics and its Applications, Vol. 388, No. 14. (15 July 2009), pp. 2995-3000. by Jianwei Shen, Zengrong Liu, Weixing Zheng, Fengdan Xu, Luonan Chen posted to microrna-networks microrna-mathematical-model microrna by heliopais to the group microRNA on 2009-10-22 17:48:43 as
	miRNA-regulated dynamics in circadian oscillator models [My Copy] BMC Systems Biology, Vol. 3, No. 1. (5 May 2009), 45. by Amitabha Nandi, Candida Vaz, Alok Bhattacharya, Ramakrishna Ramaswamy posted to microrna-regulation microrna-networks microrna-mathematical-model microrna circadian-clock by heliopais to the group microRNA on 2009-10-22 17:45:51 as along with 4 people tonamswish reyez daforerog valeriehilgers
	The role of microRNA in the delayed negative feedback regulation of gene expression [My Copy] Biochemical and Biophysical Research Communications, Vol. 358, No. 3. (06 July 2007), pp. 722-726. by Z. Xie, H. Yang, W. Liu, M. Hwang posted to microrna-mathematical-model microrna-expression microrna by heliopais to the group microRNA on 2009-10-22 17:34:49 as along with 5 people guhjy tardigrade bootsy Hank maralena
	Widespread Estrogen-Dependent Repression of microRNAs Involved in Breast Tumor Cell Growth. [My Copy] Cancer research (13 October 2009) by Gérard Maillot, Magali Lacroix-Triki, Sandra Pierredon, et al.Lise Gratadou, Sabine Schmidt, Vladimir Bénès, Henri Roché, Florence Dalenc, Didier Auboeuf, Stefania Millevoi, Stéphan Vagner posted to micrornaarray microrna estrogen era er by tonamswish to the group microRNA on 2009-10-22 16:45:53 as along with 2 people and 1 group Zephyrus omkara Breast Cancer Reading Club
	Lowly expressed human microRNA genes evolve rapidly [My Copy] Mol Biol Evol (19 March 2009), msp053. by Han Liang, Wen-Hsiung Li posted to microrna evolution by heliopais to the group microRNA on 2009-10-22 16:45:49 as along with 7 people djkt bpcusack nuin ealloza pengchy daforerog samgj
	Exploiting and antagonizing microRNA regulation for therapeutic and experimental applications [My Copy] Nature Reviews Genetics, Vol. 10, No. 8. (01 August 2009), pp. 578-585. by Brian D. Brown, Luigi Naldini posted to review microrna-medical-application microrna by heliopais to the group microRNA on 2009-10-22 16:40:19 as along with 5 people and 1 group guhjy ppgardne reyez misonneh valeriehilgers Journal picks
	Regulation of mammalian microRNA processing and function by cellular signaling and subcellular localization [My Copy] Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms, Vol. 1779, No. 11. (November 2008), pp. 678-681. by N. Smalheiser posted to review microrna-regulation microrna-post-transcriptional-regulation microrna by heliopais to the group microRNA on 2009-10-22 15:48:38 as along with 2 people daforerog guhjy
	Illuminating the silence: understanding the structure and function of small RNAs [My Copy] Nature Reviews Molecular Cell Biology, Vol. 8, No. 1. (01 January 2007), pp. 23-36. by Tariq M. Rana posted to sirna review microrna by heliopais to the group microRNA on 2009-10-22 15:41:52 as along with 7 people and 2 groups puranjoy_b bala tardigrade cdawson LABPERIOBIOLUBC margaritis ealloza DictyosteliumGroup GIG

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automation	1
barley	1
benchmark	1
bias	1
biosecurity	1
biotic	1
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brassica	1
brucella	1
c	1
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condor	1
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distane	1
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ensembl	1
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ft_ir	1
future_plans	1
fuzzy	1
gbrowse	1
genes	1
geneticics	1
genomis	1
gis	1
gmo	1
gpu	1
gramene	1
gwa	1
horizontal_gene_transfer	1
humal	1
human_genome	1
i	1
impact	1
imputation	1
integration	1
intermine	1
intron	1
iron_limitation	1
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its	1
java	1
knowledge_management	1
linear_models	1
lrt	1
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matlab	1
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mediawiki	1
membrane	1
metal	1
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methylation	1
microbial_communities	1
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mutation_rate	1
novicida	1
nucleotide	1
oligo	1
opls	1
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parser	1
pce	1
peptide	1
pfam	1
phy	1
pine	1
pinus	1
probabilistic	1
protease	1
proteat	1
proteom	1
provenance	1
psbs	1
pseudomonas	1
real_time_pcr	1
refseq	1
rflp	1
ribosome	1
rosids	1
rrecombination	1
ruby	1
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scientometrics	1
script	1
seldi	1
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soap	1
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ticks	1
transfac	1
transposition	1
tularensis	1
vaccine	1
validation	1
viewer	1
visualsisation	1
wgcna	1
wheat	1
wolbachia	1

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