ShortRead: a bioconductor package for input, quality assessment and exploration of high-throughput sequence data Export

@article{citeulike:5369385, abstract = {Summary: ShortRead is a package for input, quality assessment, manipulation and output of high-throughput sequencing data. ShortRead is provided in the R and Bioconductor environments, allowing ready access to additional facilities for advanced statistical analysis, data transformation, visualization and integration with diverse genomic resources. Availability and Implementation: This package is implemented in R and available at the Bioconductor web site; the package contains a vignette' outlining typical work flows. Contact: mtmorgan@fhcrc.org 10.1093/bioinformatics/btp450}, author = {Morgan, Martin and Anders, Simon and Lawrence, Michael and Aboyoun, Patrick and Pages, Herve and Gentleman, Robert}, citeulike-article-id = {5369385}, citeulike-linkout-0 = {http://dx.doi.org/10.1093/bioinformatics/btp450}, citeulike-linkout-1 = {http://bioinformatics.oxfordjournals.org/content/25/19/2607.abstract}, citeulike-linkout-2 = {http://bioinformatics.oxfordjournals.org/content/25/19/2607.full.pdf}, citeulike-linkout-3 = {http://bioinformatics.oxfordjournals.org/cgi/content/abstract/25/19/2607}, citeulike-linkout-4 = {http://view.ncbi.nlm.nih.gov/pubmed/19654119}, citeulike-linkout-5 = {http://www.hubmed.org/display.cgi?uids=19654119}, day = {1}, doi = {10.1093/bioinformatics/btp450}, issn = {1367-4811}, journal = {Bioinformatics}, keywords = {assessment, bioconductor, data, exploration, high-throughput, input, package, quality, r, sequence, shortread}, month = {October}, number = {19}, pages = {2607--2608}, posted-at = {2009-09-28 09:43:36}, priority = {2}, title = {ShortRead: a bioconductor package for input, quality assessment and exploration of high-throughput sequence data}, url = {http://dx.doi.org/10.1093/bioinformatics/btp450}, volume = {25}, year = {2009} }

TY - JOUR ID - citeulike:5369385 L3 - citeulike-article-id:5369385 N2 - Summary: ShortRead is a package for input, quality assessment, manipulation and output of high-throughput sequencing data. ShortRead is provided in the R and Bioconductor environments, allowing ready access to additional facilities for advanced statistical analysis, data transformation, visualization and integration with diverse genomic resources. Availability and Implementation: This package is implemented in R and available at the Bioconductor web site; the package contains a vignette' outlining typical work flows. Contact: mtmorgan@fhcrc.org 10.1093/bioinformatics/btp450 IS - 19 JF - Bioinformatics SN - 1367-4811 EP - 2608 TI - ShortRead: a bioconductor package for input, quality assessment and exploration of high-throughput sequence data VL - 25 SP - 2607 KW - assessment KW - bioconductor KW - data KW - exploration KW - high-throughput KW - input KW - package KW - quality KW - r KW - sequence KW - shortread AU - Morgan, Martin AU - Anders, Simon AU - Lawrence, Michael AU - Aboyoun, Patrick AU - Pages, Herve AU - Gentleman, Robert PY - 2009/10/01/ UR - http://dx.doi.org/10.1093/bioinformatics/btp450 ER -