dswan's library 755 articles Export Sort

Ordered by to_read.

Hide details

	The balance of reproducibility, sensitivity, and specificity of lists of differentially expressed genes in microarray studies. [My Copy] BMC bioinformatics, Vol. 9 Suppl 9, No. Suppl 9. (2008), S10. by Leming Shi, Wendell D. Jones, Roderick V. Jensen, et al.Stephen C. Harris, Roger G. Perkins, Federico M. Goodsaid, Lei Guo, Lisa J. Croner, Cecilie Boysen, Hong Fang, Feng Qian, Shashi Amur, Wenjun Bao, Catalin C. Barbacioru, Vincent Bertholet, Xiaoxi Megan M. Cao, Tzu-Ming M. Chu, Patrick J. Collins, Xiao-Hui H. Fan, Felix W. Frueh, James C. Fuscoe, Xu Guo, Jing Han, Damir Herman, Huixiao Hong, Ernest S. Kawasaki, Quan-Zhen Z. Li, Yuling Luo, Yunqing Ma, Nan Mei, Ron L. Peterson, Raj K. Puri, Richard Shippy, Zhenqiang Su, Yongming Andrew A. Sun, Hongmei Sun, Brett Thorn, Yaron Turpaz, Charles Wang, Sue Jane J. Wang, Janet A. Warrington, James C. Willey, Jie Wu, Qian Xie, Liang Zhang, Lu Zhang, Sheng Zhong, Russell D. Wolfinger, Weida Tong posted to analysis differential expression genes lists meta microarray reproducibiliy sensitivity specificity by dswan on 2008-12-18 11:16:40 as along with 21 people and 1 group bertelsen frohike bsamal maximilianh GustavoG mayercd Zephyrus daforerog oliviawi zufar bandrewfox lwaldron mdharsee shikin rdiaz jfr ugengma guhjy GeeSharpMinor ptrobajo Jonesy Bioinformatics
	Toward understanding the genetics of alcohol drinking through transcriptome meta-analysis [My Copy] Vol. 103, No. 16. (18 April 2006), pp. 6368-6373. by Megan K. Mulligan, Igor Ponomarev, Robert J. Hitzemann, et al.John K. Belknap, Boris Tabakoff, Adron R. Harris, John C. Crabbe, Yuri A. Blednov, Nicholas J. Grahame, Tamara J. Phillips, Deborah A. Finn, Paula L. Hoffman, Vishwanath R. Iyer, George F. Koob, Susan E. Bergeson posted to analysis meta microarray by dswan on 2008-12-18 11:11:54 as along with 1 group Bioinformatics
	An automated method for finding molecular complexes in large protein interaction networks. [My Copy] BMC Bioinformatics, Vol. 4, No. 1. (13 January 2003) by G. D. Bader, C. W. Hogue posted to complex cytoscape interaction network plugin protein by dswan on 2008-11-25 15:24:36 as along with 10 people and 2 groups zufar waqaralikeble cswinburne jiny dragonrez lfriedl nirfriedman massivemayhem carlk ethkim Bioinformatics kdl
	Boolean network simulations for life scientists. [My Copy] Source code for biology and medicine, Vol. 3, No. 1. (14 November 2008) by István Albert, Juilee Thakar, Song Li, Ranran Zhang, Réka Albert posted to boolean modelling network simulation software tutorial by dswan on 2008-11-23 12:50:25 as along with 3 people daforerog cannin dolchan
	Uncovering information on expression of natural antisense transcripts in Affymetrix MOE430 datasets [My Copy] BMC Genomics, Vol. 8 (28 June 2007), 200. by Sebastian Oeder, Joerg Mages, Paul Flicek, Roland Lang posted to affymetrix antisense expression nat by dswan on 2008-11-21 11:22:55 as along with 1 person and 1 group jfr Bioinformatics
	DASMiner: discovering and integrating data from DAS sources [My Copy] BMC Systems Biology, Vol. 3, No. 1. (2009), 109. by Diogo Veiga, Helena Deus, Caner Akdemir, Ana Vasconcelos, Jonas Almeida posted to sources integrating discovery data das application by dswan on 2009-12-15 11:43:20 as along with 4 people and 2 groups dullhunk druvus kshameer cisevol Journal picks BergmanLab
	Evaluating annotations of an Agilent expression chip suggests that many features cannot be interpreted [My Copy] BMC Genomics, Vol. 10, No. 1. (2009), 566. by E. Michael Gertz, Kundan Sengupta, Michael Difilippantonio, Thomas Ried, Alejandro Schaffer posted to interpreted features expression evaluation chip annotation agilent by dswan on 2009-12-15 11:42:17 as along with 1 person neils
	The ontology of biological sequences [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (18 November 2009), 377. by Robert Hoehndorf, Janet Kelso, Heinrich Herre posted to sequences ontology biological by dswan on 2009-12-07 16:35:05 as along with 11 people and 2 groups sillitoe cjm richardbickerton druvus guhjy operon mjbell allysonlister kshameer barriot dullhunk Orengo Group Journal Picks Journal picks
	Illumina WG-6 BeadChip strips should be normalized separately [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (2009), 372. by Wei Shi, Ashish Banerjee, Matthew Ritchie, Steve Gerondakis, Gordon Smyth posted to wg-6 strips separately normalisation illumina beadchip by dswan on 2009-12-07 16:34:47 as along with 3 people and 1 group heliopais ptrobajo shikin Bioinformatics
	Exon Array Analyzer: a web interface for Affymetrix exon array analysis [My Copy] Bioinformatics In Bioinformatics, Vol. 25, No. 24. (15 December 2009), pp. 3323-3324. by Pascal Gellert, Shizuka Uchida, Thomas Braun posted to web interface exon array analysis affymetrix by dswan on 2009-12-04 17:12:39 as along with 2 people torfinnnome neils
	Integrating Proteomic, Transcriptional, and Interactome Data Reveals Hidden Components of Signaling and Regulatory Networks [My Copy] Sci. Signal. In Sci. Signal., Vol. 2, No. 81. (28 July 2009), ra40. by Shao-shan C. Huang, Ernest Fraenkel posted to transcriptomic signalling regulatory proteomic networks interactome integration integrating data components by dswan on 2009-12-04 13:43:52 as along with 3 people roys brianb sjcockell
	Information processing and signal integration in bacterial quorum sensing [My Copy] Molecular Systems Biology In Mol Syst Biol, Vol. 5 (17 November 2009) by Pankaj Mehta, Sidhartha Goyal, Tao Long, Bonnie L. Bassler, Ned S. Wingreen posted to signal sensing quorum processing integration information bacterial by dswan on 2009-12-04 09:15:50 as along with 2 people shaytal nicholasflann
	GeneSigDB--a curated database of gene expression signatures. [My Copy] Nucleic acids research (24 November 2009), gkp1015. by Aedín C. Culhane, Thomas Schwarzl, Razvan Sultana, et al.Kermshlise C. Picard, Shaita C. Picard, Tim H. Lu, Katherine R. Franklin, Simon J. French, Gerald Papenhausen, Mick Correll, John Quackenbush posted to web signatures gene expression database curated application by dswan on 2009-11-27 14:09:12 as along with 3 people guhjy zufar ptrobajo
	Impact of Genome Reduction on Bacterial Metabolism and Its Regulation [My Copy] Science In Science, Vol. 326, No. 5957. (27 November 2009), pp. 1263-1268. by Eva Yus, Tobias Maier, Konstantinos Michalodimitrakis, et al.Vera van Noort, Takuji Yamada, Wei-Hua Chen, Judith A. H. Wodke, Marc Guell, Sira Martinez, Ronan Bourgeois, Sebastian Kuhner, Emanuele Raineri, Ivica Letunic, Olga V. Kalinina, Michaela Rode, Richard Herrmann, Ricardo Gutierrez-Gallego, Robert B. Russell, Anne-Claude Gavin, Peer Bork, Luis Serrano posted to regulation reduction minimal metabolism genome bacterial by dswan on 2009-11-27 13:50:03 as along with 6 people and 1 group adampah snow_dragon operon michaelbarton venancio djkt iSEEM
	Combining tissue transcriptomics and urine metabolomics for breast cancer biomarker identification. [My Copy] Bioinformatics (Oxford, England), Vol. 25, No. 23. (1 December 2009), pp. 3151-3157. by Hojung Nam, Bong Chul C. Chung, Younghoon Kim, KiYoung Lee, Doheon Lee posted to transcriptomics metabolomics integration identification data cancer biomarker by dswan on 2009-11-18 10:40:35 as along with 4 people nuin torfinnnome brianb neils
	Lost in translation: an assessment and perspective for computational microRNA target identification [My Copy] Bioinformatics In Bioinformatics, Vol. 25, No. 23. (1 December 2009), pp. 3049-3055. by Panagiotis Alexiou, Manolis Maragkakis, Giorgos L. Papadopoulos, Martin Reczko, Artemis G. Hatzigeorgiou posted to prediction microrna computational by dswan on 2009-11-18 10:40:01 as along with 19 people and 4 groups renatomilani fstrozzi jperkins jforment hyojinkang apaydin Stew guhjy pattersonee Jporci heliopais kintoki dandaman kshameer lwaldron toni_marco frohike lp2 daforerog Orengo Group Journal Picks Bioinformatics Core Service Bioinformatics - CRUK Journal picks
	Using the ratio of means as the effect size measure in combining results of microarray experiments [My Copy] BMC Systems Biology, Vol. 3, No. 1. (2009), 106. by Pingzhao Hu, Celia Greenwood, Joseph Beyene posted to size results ratio microarray meta measure means experiemnts effect combining analysis by dswan on 2009-11-09 11:42:52 as along with 1 person and 1 group renatomilani Bioinformatics
	Integrative clustering of multiple genomic data types using a joint latent variable model with application to breast and lung cancer subtype analysis [My Copy] Bioinformatics, Vol. 25, No. 22. (15 November 2009), pp. 2906-2912. by Ronglai Shen, Adam B. Olshen, Marc Ladanyi posted to variable types omic multiple model latent joint integrative integration genomic data clustering by dswan on 2009-11-06 17:30:13 as along with 1 person rdiaz
	Saint: a lightweight integration environment for model annotation [My Copy] Bioinformatics, Vol. 25, No. 22. (15 November 2009), pp. 3026-3027. by Allyson L. Lister, Matthew Pocock, Morgan Taschuk, Anil Wipat posted to sbml model lightweight integration environment annotation by dswan on 2009-11-06 17:27:20 as along with 3 people and 1 group reyez dullhunk allysonlister Bioinformatics
	De novo transcriptome assembly with ABySS [My Copy] Bioinformatics In Bioinformatics, Vol. 25, No. 21. (1 November 2009), pp. 2872-2877. by Inanc Birol, Shaun D. Jackman, Cydney B. Nielsen, et al.Jenny Q. Qian, Richard Varhol, Greg Stazyk, Ryan D. Morin, Yongjun Zhao, Martin Hirst, Jacqueline E. Schein, Doug E. Horsman, Joseph M. Connors, Randy D. Gascoyne, Marco A. Marra, Steven J. M. Jones posted to transcriptome rna-seq novo de assembly by dswan on 2009-11-06 17:21:55 as along with 12 people fstrozzi orzenil n00c dakelley torfinnnome TRHvidsten rtogawa ramonvidal stubrown darshan GustavoLacerda druvus
	integrOmics: an R package to unravel relationships between two omics datasets [My Copy] Bioinformatics, Vol. 25, No. 21. (1 November 2009), pp. 2855-2856. by Kim-Anh Le Cao, Ignacio Gonzalez, Sebastien Dejean posted to relationships r omics integromics integration datasets correlation bioconductor by dswan on 2009-11-06 17:20:25 as along with 17 people and 1 group molnet-mna jperkins tonamswish mayercd operon kshameer heliopais dolchan nuin ptrobajo sebastien_vigneau rdiaz cassj brianb neils natstreet druvus Orengo Group Journal Picks
	BASE - 2nd generation software for microarray data management and analysis [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (2009), 330. by Johan V. Christersson, Nicklas Nordborg, Martin Svensson, Jari Hakkinen posted to website microarray management data base analysis by dswan on 2009-11-06 17:06:00 as along with 6 people and 1 group nuin sillitoe heliopais daforerog druvus torfinnnome Orengo Group Journal Picks
	Gene ARMADA: an integrated multi-analysis platform for microarray data implemented in MATLAB. [My Copy] BMC bioinformatics, Vol. 10, No. 1. (2009), 354. by Aristotelis Chatziioannou, Panagiotis Moulos, Fragiskos N. Kolisis posted to microarray matlab analysis by dswan on 2009-11-06 17:05:38 as along with 3 people and 1 group sillitoe erexhepa frohike Orengo Group Journal Picks
	ArrayMining: a modular web-application for microarray analysis combining ensemble and consensus methods with cross-study normalization. [My Copy] BMC bioinformatics, Vol. 10, No. 1. (2009), 358. by Enrico Glaab, Jonathan M. Garibaldi, Natalio Krasnogor posted to web study normalisation modular mining microarray meta cross array application analysis by dswan on 2009-11-06 17:04:14 as along with 4 people and 2 groups shikin sillitoe heliopais neils Orengo Group Journal Picks Bioinformatics
	Getting Started in Gene Expression Microarray Analysis [My Copy] PLoS computational biology In PLoS Comput Biol, Vol. 5, No. 10. (30 October 2009), e1000543. by Donna K. Slonim, Itai Yanai posted to tutorial microarray gene expression analysis by dswan on 2009-11-06 16:44:05 as along with 11 people and 2 groups csimmons Zephyrus Stew barriot laral inesdesantiago iskathy Fournier34 renatomilani ptrobajo heliopais Bioinformatics - CRUK Bioinformatics
	Human DNA methylomes at base resolution show widespread epigenomic differences [My Copy] Nature In Nature, Vol. 462, No. 7271. (14 October 2009), pp. 315-322. by Ryan Lister, Mattia Pelizzola, Robert H. Dowen, et al.R. David Hawkins, Gary Hon, Julian Tonti-Filippini, Joseph R. Nery, Leonard Lee, Zhen Ye, Que-Minh Ngo, Lee Edsall, Jessica Antosiewicz-Bourget, Ron Stewart, Victor Ruotti, A. Harvey Millar, James A. Thomson, Bing Ren, Joseph R. Ecker posted to widespread resolution methylome methylation human epigenomic epigenetic dna differences base by dswan on 2009-10-16 09:09:28 as along with 29 people and 4 groups ongenetics gjuggler djkt hyojinkang gbloeb akakak guhjy jessopher malay gdb qayub greg neils megraw mamitamura tonamswish rsaito clearbluespring rschulz RyuOgawa hagechouchin443 devinmhellesen daveGerrard polivares fenghezi colinveal frohike liqbbi ethanmj JLab CTCF BergmanLab Journal picks
	Stitching science together. [My Copy] Nature, Vol. 461, No. 7266. (15 October 2009), pp. 881-881. by Cameron Neylon posted to wave together stitching science google collaboration by dswan on 2009-10-16 09:06:24 as along with 12 people and 6 groups hughesro Sergey_gerbek CameronNeylon perkeo reyez mxro jobadge AJCann skoch3 thegoose ppgardne dullhunk Parenting 2.0 Information Integration Architecture Science 2.0 / Open Science eLearning in Leicester Koch_Lab Journal picks
	Harnessing gene expression to identify the genetic basis of drug resistance [My Copy] Molecular Systems Biology, Vol. 5 (13 October 2009) by Bo-Juen Chen, Helen C. Causton, Denesy Mancenido, Noel L. Goddard, Ethan O. Perlstein, Dana Pe'er posted to resistance identification genetic gene expression drug basis by dswan on 2009-10-16 09:03:31 as along with 4 people ashishanand phoenixzxl ptrobajo frohike
	Relative power and sample size analysis on gene expression profiling data. [My Copy] BMC genomics, Vol. 10, No. 1. (2009), 439. by M. van Iterson, P. A. 't Hoen, P. Pedotti, et al.G. J. Hooiveld, J. T. den Dunnen, G. J. van Ommen, J. M. Boer, R. X. Menezes posted to size sample relative profiling power gene expression data analysis by dswan on 2009-10-12 11:29:48 as along with 6 people and 1 group manduca Stew fenghezi mkiyer rdiaz barriot Bioinformatics - CRUK
	ShotgunFunctionalizeR: an R-package for functional comparison of metagenomes [My Copy] Bioinformatics, Vol. 25, No. 20. (15 October 2009), pp. 2737-2738. by Erik Kristiansson, Philip Hugenholtz, Daniel Dalevi posted to r metagenomes functional comparison bioconductor by dswan on 2009-10-12 11:24:23 as along with 4 people and 1 group operon jmeppley skembel djkt iSEEM
	Moderated effect size and P-value combinations for microarray meta-analyses [My Copy] Bioinformatics In Bioinformatics, Vol. 25, No. 20. (15 October 2009), pp. 2692-2699. by Guillemette Marot, Jean-Louis Foulley, Claus-Dieter Mayer, Florence Jaffrezic posted to size p-value moderated micoarray meta effect combinations analysis by dswan on 2009-10-12 11:21:53 as along with 7 people bsamal zufar shikin renatomilani rdiaz nuin daforerog
	A modified LOESS normalization applied to microRNA arrays: a comparative evaluation [My Copy] Bioinformatics, Vol. 25, No. 20. (15 October 2009), pp. 2685-2691. by Davide Risso, Maria S. Massa, Monica Chiogna, Chiara Romualdi posted to normalisation modified mirna microrna loess evaluation comparative by dswan on 2009-10-12 11:21:03 as along with 9 people and 1 group VR lwaldron heliopais renatomilani rdiaz nuin guhjy myzhang ealloza microRNA
	TargetMiner: MicroRNA target prediction with systematic identification of tissue specific negative examples [My Copy] Bioinformatics In Bioinformatics, Vol. 25, No. 20. (19 August 2009), pp. btp503-2631. by Sanghamitra Bandyopadhyay, Ramkrishna Mitra posted to tissue target systematic specific prediction negative microrna identification examples by dswan on 2009-10-12 11:19:32 as along with 8 people and 2 groups jforment heliopais reyez morrislab djkt TRHvidsten guhjy frohike Bioinformatics Core Service microRNA
	Origins and functional impact of copy number variation in the human genome [My Copy] Nature In Nature, Vol. advance online publication (07 October 2009) by Donald F. Conrad, Dalila Pinto, Richard Redon, et al.Lars Feuk, Omer Gokcumen, Yujun Zhang, Jan Aerts, T. Daniel Andrews, Chris Barnes, Peter Campbell, Tomas Fitzgerald, Min Hu, Chun H. Ihm, Kati Kristiansson, Daniel G. MacArthur, Jeffrey R. MacDonald, Ifejinelo Onyiah, Andy W. Pang, Sam Robson, Kathy Stirrups, Armand Valsesia, Klaudia Walter, John Wei, Chris Tyler-Smith, Nigel P. Carter, Charles Lee, Stephen W. Scherer, Matthew E. Hurles posted to variation origins number impact human genome functional copy cnv by dswan on 2009-10-12 11:16:32 as along with 21 people and 1 group n00c Zephyrus gthorisson vplagnol biovils psique chvlyl daed daforerog zufar jessopher DrRichardBadge operon colinveal frohike sf11 sameersoi polivares qayub bpcusack rdiaz Journal picks
	BayesPeak: Bayesian analysis of ChIP-seq data [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (2009), 299. by Christiana Spyrou, Rory Stark, Andy Lynch, Simon Tavare posted to sequencing data chip-seq chip bayesian analysis by dswan on 2009-10-12 11:15:48 as along with 11 people and 4 groups Vincent_Rouilly tonamswish fenghezi inesdesantiago idonaldson polivares mkiyer druvus stajich humburg rschulz Bioinformatics JLab BergmanLab Mycology
	Social tagging in the life sciences: characterizing a new metadata resource for bioinformatics [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (2009), 313. by Benjamin Good, Joseph Tennis, Mark Wilkinson posted to tagging social sciences resource metadata life bioinformatics by dswan on 2009-10-12 11:14:41 as along with 29 people and 8 groups cgl davidmam IgorP jalonsoarevalo perkeo applebyb artaban421 alhoori heliopais metatheory kevinemamy sstose jago bbrunelle lyss klauso daforerog meikipp nuin thegoose mikel_egana allysonlister Gaetan dullhunk fgibson druvus rvosa egonw cisevol Zotero en español UNFCCC STS Integrative Expertise for Global Health CBD Convention on Biological Diversity Journal picks FAB-lab BergmanLab
	A first principles approach to differential expression in microarray data analysis [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (2009), 292. by Robert Rubin posted to principles microarray first expression differential data anova analysis by dswan on 2009-10-12 11:13:10 as along with 5 people brianb neils renatomilani rdiaz torfinnnome
	Strategies for analyzing highly enriched IP-chip datasets [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (22 September 2009), 305. by Simon Knott, Christopher Viggiani, Oscar Aparicio, Simon Tavare posted to strategy enriched chip-on-chip chip analysis by dswan on 2009-10-12 11:11:42 as
	Genomic analysis reveals a tight link between transcription factor dynamics and regulatory network architecture [My Copy] Molecular Systems Biology, Vol. 5 (18 August 2009) by Raja Jothi, S. Balaji, Arthur Wuster, et al.Joshua A. Grochow, Jorg Gsponer, Teresa M. Przytycka, L. Aravind, Madan M. Babu posted to transcription regulatory network link heirarchy genomic factor dynamics architecture analysis by dswan on 2009-10-09 14:21:25 as along with 12 people ashishanand apocapoc brianb sjcockell zwang fenghezi rdiaz megraw poirel TRHvidsten jjray biomcgary
	Genetics meets metabolomics: a genome-wide association study of metabolite profiles in human serum. [My Copy] PLoS genetics, Vol. 4, No. 11. (28 November 2008), e1000282. by Christian Gieger, Ludwig Geistlinger, Elisabeth Altmaier, et al.Martin Hrabé de Angelis, Florian Kronenberg, Thomas Meitinger, Hans-Werner W. Mewes, H-Erich E. Wichmann, Klaus M. Weinberger, Jerzy Adamski, Thomas Illig, Karsten Suhre posted to wide study serum profiles metabolomics metabolite human genome genetics association by dswan on 2009-10-09 09:55:34 as along with 10 people and 1 group nicholso mrw34 Zephyrus guhjy xingxu jo_davies songpku reyez bertrandservin caseybrown Roswell Cancer Crosstalk
	Correlating multiple SNPs and multiple disease phenotypes: penalized non-linear canonical correlation analysis. [My Copy] Bioinformatics (Oxford, England), Vol. 25, No. 21. (1 November 2009), pp. 2764-2771. by Sandra Waaijenborg, Aeilko H. Zwinderman posted to snps phenotypes nonlinear multiple disease correlation correlating canonical analysis by dswan on 2009-10-08 11:05:39 as along with 3 people and 1 group guhjy rdiaz pkonings Bioinformatics
	SNP discovery in associating genetic variation with human disease phenotypes [My Copy] Mutation Research/Fundamental and Molecular Mechanisms of Mutagenesis, Vol. 573, No. 1-2. (03 June 2005), pp. 41-53. by Y. Suh, J. Vijg posted to variation snp phenotpye human genetic disease discovery associating by dswan on 2009-10-08 10:59:22 as along with 1 person and 1 group cgreal CGREL
	The Modular Organization of Protein Interactions in Escherichia coli [My Copy] PLoS Comput Biol, Vol. 5, No. 10. (2 October 2009), e1000523. by José M. Peregrín-Alvarez, Xuejian Xiong, Chong Su, John Parkinson posted to protein organisation modular interactions coli by dswan on 2009-10-02 16:49:40 as along with 6 people and 2 groups venancio CorinYeats biomcgary grahamc kiekyon poirel Orengo Group Journal Picks Bioinformatics
	A Plunge into Networks [My Copy] Science, Vol. 326, No. 5949. (2 October 2009), pp. 47-48. by David Krackhardt posted to review networks book by dswan on 2009-10-02 10:46:54 as
	QuickGO: a user tutorial for the web-based Gene Ontology browser [My Copy] Database, Vol. 2009, No. 0. (29 September 2009), bap010. by Rachael P. Huntley, David Binns, Emily Dimmer, Daniel Barrell, Claire O'Donovan, Rolf Apweiler posted to web tutorial ontology gene browser application by dswan on 2009-09-30 10:48:05 as along with 1 group Bioinformatics
	Targeted capture and massively parallel sequencing of 12 human exomes. [My Copy] Nature, Vol. 461, No. 7261. (10 September 2009), pp. 272-276. by Sarah B. Ng, Emily H. Turner, Peggy D. Robertson, et al.Steven D. Flygare, Abigail W. Bigham, Choli Lee, Tristan Shaffer, Michelle Wong, Arindam Bhattacharjee, Evan E. Eichler, Michael Bamshad, Deborah A. Nickerson, Jay Shendure posted to targeted sequencing parallel massively human exomes capture by dswan on 2009-09-28 09:57:10 as along with 23 people and 1 group seb1 hzoltan liqbbi chvlyl ongenetics psique fenghezi n00c jmanning2k torfinnnome GeeSharpMinor pkonings neils djkt daforerog PabloMarin stubrown danmaclean xingxu vplagnol druvus jandot frohike Journal picks
	Direct RNA sequencing [My Copy] Nature, Vol. 461, No. 7265. (23 September 2009), pp. 814-818. by Fatih Ozsolak, Adam R. Platt, Dan R. Jones, et al.Jeffrey G. Reifenberger, Lauryn E. Sass, Peter McInerney, John F. Thompson, Jayson Bowers, Mirna Jarosz, Patrice M. Milos posted to sequencing rna-seq rna direct by dswan on 2009-09-28 09:55:58 as along with 20 people and 2 groups pmalkus hzoltan manduca gotgenes jwfoley GeeSharpMinor mlc39 colinveal reyez TRHvidsten djkt ppgardne dchughes heliopais vingron nzm n00c lp2 toni_marco kinestetika Journal picks Bioinformatics - CRUK
	R/Bioconductor software for Illumina's Infinium whole-genome genotyping BeadChips. [My Copy] Bioinformatics (Oxford, England), Vol. 25, No. 19. (1 October 2009), pp. 2621-2623. by Matthew E. Ritchie, Benilton S. Carvalho, Kurt N. Hetrick, Simon Tavaré, Rafael A. Irizarry posted to whole r infinium illumina genotyping genome bioconductor beadchips by dswan on 2009-09-28 09:48:14 as along with 7 people carolep jsatkosk daforerog djkt shikin rdiaz torfinnnome
	RNA-MATE: a recursive mapping strategy for high-throughput RNA-sequencing data [My Copy] Bioinformatics, Vol. 25, No. 19. (1 October 2009), pp. 2615-2616. by Nicole Cloonan, Qinying Xu, Geoffrey J. Faulkner, et al.Darrin F. Taylor, Dave T. P. Tang, Gabriel Kolle, Sean M. Grimmond posted to strategy sequencing rna-seq rna recursive mapping high-throughput data by dswan on 2009-09-28 09:47:09 as along with 14 people and 1 group hzoltan idonaldson cthachuk ethanmj cassj GeeSharpMinor sbmontgomery shyamsg natstreet druvus samgj n00c guhjy GustavoLacerda Journal picks
	Genoscape: a Cytoscape plug-in to automate the retrieval and integration of gene expression data and molecular networks. [My Copy] Bioinformatics (Oxford, England), Vol. 25, No. 19. (1 October 2009), pp. 2617-2618. by Mathieu Clément-Ziza, Christophe Malabat, Christian Weber, et al.Ivan Moszer, Tero Aittokallio, Catherine Letondal, Sandrine Rousseau posted to retrieval plugin networks molecular integration genoscript genoscape gene expression database data cytoscape automate application by dswan on 2009-09-28 09:46:09 as along with 6 people icecrown guhjy neils sjcockell frohike druvus

Note: You may cite this page as: http://www.citeulike.org/user/dswan/order/to_read

Result page: 1 2 3 4 5 6 7 8 9 10 Next

Sort by:
Order:	Default Ascending Descending
Empty fields:	Default First Last

analysis	107
gene	74
application	69
expression	69
microarray	68
data	65
biology	35
meta	35
web	32
bioconductor	30
transcriptomics	26
genespring	25
sequencing	22
differential	21
array	20
affymetrix	19
time	18
normalisation	18
genome	18
r	17
network	16
visualisation	16
microrna	15
comparison	15
genes	15
annotation	14
synthetic	14
systems	14
lists	14
bioinformatics	14
protein	13
course	13
sets	13
illumina	12
database	12
prediction	12
exon	12
biological	12
deg	11
short	11
human	11
copy	11
integration	11
pathway	11
dna	10
functional	10
networks	10
gsea	10
review	10
2	10
sequence	10
rna	10
probe	10
profiling	9
experiments	9
variation	9
next	9
ontology	9
editorial	9
tool	9
number	9
regulatory	9
arraycgh	9
computational	9
server	8
cancer	8
detection	8
size	8
model	8
chip	8
sample	8
design	8
cytoscape	8
bacterial	8
methodology	8
generation	8
read	7
comparative	7
management	7
antisense	7
interaction	7
mapping	7
rna-seq	7
site	7
specific	7
colour	7
enrichment	6
quality	6
services	6
discovery	6
transcription	6
control	6
assembly	6
statistics	6
mining	6
framework	6
set	6
method	6
identifying	6
genetic	5
daniel	5
oligonucleotide	5
rank	5
swan	5
study	5
svm	5
small	5
high-throughput	5
transcriptional	5
integrating	5
cgh	5
tiling	5
igem	5
correlation	5
bacillus	5
subtilis	5
algorithm	5
clinical	5
reference	5
clustering	5
reproducibility	5
3d	5
genomic	5
gen	5
channel	4
classification	4
functions	4
methylation	4
research	4
modular	4
target	4
information	4
integrated	4
studies	4
tissue	4
species	4
interactions	4
multiple	4
engineering	4
evaluation	4
gui	4
sequences	4
bicluster	4
computing	4
profile	4
overrepresentation	4
multivariate	4
omics	4
molecular	4
targets	4
experimental	4
plugin	4
chip-on-chip	4
high	4
pathways	4
disease	4
based	4
mouse	4
reads	4
programming	4
wide	4
mrna	4
power	4
testing	4
software	4
website	4
series	4
transcriptome	4
signalling	3
machine	3
filtering	3
two	3
platform	3
integrative	3
function	3
snp	3
cluster	3
expressed	3
quantitation	3
variance	3
transcript	3
ratio	3
estimation	3
feature	3
tutorial	3
standard	3
cells	3
agilent	3
cloud	3
linear	3
alignment	3
base	3
practice	3
limma	3
whole	3
perspective	3
in	3
change	3
strand	3
sbml	3
datasets	3
identification	3
signatures	3
fast	3
origins	3
anova	3
pipeline	3
proteomics	3
rat	3
454	3
statistical	3
approach	3
technologies	3
support	3
activity	3
system	3
workflow	3
replicate	3
protocol	3
taverna	3
guide	3
outcome	3
teaching	3
query	3
open	3
effect	3
evolution	3
cdna	3
codon	3
resource	3
qpcr	3
products	3
cross-species	3
exploration	3
best	3
modelling	3
interactome	3
processing	3
complex	3
reporting	3
robust	3
tissues	3
features	3
roc	3
tumour	3
cross	3
combining	2
stochastic	2
theory	2
age	2
variant	2
throughput	2
go	2
associated	2
across	2
correspondance	2
and	2
de	2
publications	2
rma	2
bagboosting	2
browser	2
coli	2
systematic	2
accuracy	2
wise	2
semantic	2
aging	2
polymorphism	2
attachment	2
critical	2
genechip	2
patterns	2
bias	2
widespread	2
article	2
metadata	2
approaches	2
using	2
fold	2
repository	2
sensitivity	2
metagenomics	2
geo	2
analyse	2
clustered	2
carmen	2
coding	2
core	2
transporter	2
signal	2
flexible	2
variable	2
kochan	2
applying	2
index	2
gold	2
simple	2
cnv	2
service	2
specificity	2
parallel	2
improved	2
rules	2
life	2
profiles	2
biobrick	2
differentially	2
mammalian	2
essential	2
learning	2
environmental	2
preparation	2
mage	2
beadarray	2
prokaryotic	2
usage	2
salmonella	2
strategy	2
classes	2
murine	2
ruby	2
typing	2
efficient	2
introduction	2
empirical	2
measure	2
regulation	2
resistance	2
sensing	2
cell	2
desktop	2
xml	2
mage-ml	2
suite	2
level	2
group	2
allele	2
dependent	2
non-coding	2
libsbml	2
development	2
transcriptomic	2
impact	2
informatics	2
nimblegen	2
circuit	2
implementation	2
enriched	2
webservices	2
yeast	2
selection	2
summarisation	2
cellular	2
proteomic	2
association	2
package	2
correction	2
sporulation	2
relative	2
hierarchical	2
book	2
science	2
genomics	2
rate	2
mres	2
measuring	2
solexa	2
the	2
mirna	2
synthesis	2
python	2
metrics	2
genomes	2
discriminant	2
atlas	2
collecting	2
public	2
reactome	2
global	2
novo	2
metabolomics	2
significance	2
opinion	2
transfer	2
pooling	2
mixture	2
endo-sirna	2
sciences	2
simulation	2
bayes	2
duct	2
probabilistic	2
interface	2
vector	2
mpss	2
dynamics	2
parts	2
test	2
source	2
lab	2
local	2
pam	1
guidelines	1
pipelineg	1
snps	1
history	1
reduction	1
importing	1
class	1
engine	1
education	1
first	1
inner	1
splice	1
fly	1
venn	1
phenotypes	1
probes	1
collaborative	1
approximate	1
correlating	1
vertebrate	1
modified	1
microblogging	1
zinc	1
circuits	1
divide	1
java	1
shortread	1
linux	1
architeechture	1
boost	1
david	1
pluripotent	1
active	1
basis	1
monoallelic	1
exemplar	1
loss	1
summary	1
discordant	1
topology	1
meeting	1
varying	1
motifs	1
cpg	1
uniprot	1
act	1
multiplex	1
directional	1
microarrays	1
transformation	1
dag	1
diagnostic	1
hierarchy	1
response	1
polyendocrinopathy	1
models	1
convert	1
means	1
arrayexpress	1
lymphocyte	1
chromosome	1
sequnce	1
fragment	1
receptor	1
team	1
plos	1
linkage	1
organisms	1
separately	1
taxonomic	1
conference	1
capture	1
resampling	1
how	1
schema	1
researcherid	1
involvement	1
computer	1
measures	1
connecting	1
finding	1
cloned	1
adjustment	1
search	1
proteins	1
endogenous	1
all	1
rt-pcr	1
metabolite	1
project	1
networls	1
biolinux	1
tmad	1
mays	1
disorder	1
devices	1
aray	1

dswan's library 755 articles Export Sort

dswan's tags