Development of a Workflow for Protein Sequence Analysis Based on the Taverna Workbench® Software Export

@incollection{citeulike:6080453, abstract = {A workflow based on the Taverna Workbench® software and tentatively named WPSA was developed to perform a generic protein sequence analysis eliminating the need to cut and paste data throughout web applications. The program performs a homology search, a multiple sequence alignment and a phylogeny analysis using PHYLogeny Interface Package (PHYLIP). The workflow designed gives a fast and significant answer to the user about the input sequence entered taking between 5 to 10 minutes to run depending on the Internet connection and web services.}, author = {Monteiro, Mariana and Pintado, Manuela and Malcata, Francisco and Bessant, Conrad and Moreira, Patr\'{\i}cia}, citeulike-article-id = {6080453}, citeulike-linkout-0 = {http://dx.doi.org/10.1007/978-3-642-02481-8_169}, citeulike-linkout-1 = {http://www.springerlink.com/content/x2187365832w15l3}, doi = {10.1007/978-3-642-02481-8_169}, journal = {Distributed Computing, Artificial Intelligence, Bioinformatics, Soft Computing, and Ambient Assisted Living}, keywords = {cites-taverna, taverna, workflow}, pages = {1118--1124}, posted-at = {2009-11-06 10:51:38}, priority = {2}, title = {Development of a Workflow for Protein Sequence Analysis Based on the Taverna Workbench® Software}, url = {http://dx.doi.org/10.1007/978-3-642-02481-8_169}, year = {2009} }

TY - CHAP ID - citeulike:6080453 L3 - citeulike-article-id:6080453 N2 - A workflow based on the Taverna Workbench® software and tentatively named WPSA was developed to perform a generic protein sequence analysis eliminating the need to cut and paste data throughout web applications. The program performs a homology search, a multiple sequence alignment and a phylogeny analysis using PHYLogeny Interface Package (PHYLIP). The workflow designed gives a fast and significant answer to the user about the input sequence entered taking between 5 to 10 minutes to run depending on the Internet connection and web services. JF - Distributed Computing, Artificial Intelligence, Bioinformatics, Soft Computing, and Ambient Assisted Living EP - 1124 TI - Development of a Workflow for Protein Sequence Analysis Based on the Taverna Workbench® Software SP - 1118 KW - cites-taverna KW - taverna KW - workflow AU - Monteiro, Mariana AU - Pintado, Manuela AU - Malcata, Francisco AU - Bessant, Conrad AU - Moreira, Patrícia PY - 2009/// UR - http://dx.doi.org/10.1007/978-3-642-02481-8_169 ER -