ealloza's comparison [11 articles] Export

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	A modified LOESS normalization applied to microRNA arrays: a comparative evaluation [My Copy] Bioinformatics, Vol. 25, No. 20. (15 October 2009), pp. 2685-2691. by Davide Risso, Maria S. Massa, Monica Chiogna, Chiara Romualdi posted to comparison expression microarray microrna normalization by ealloza on 2009-07-28 12:10:09 as along with 9 people and 1 group VR lwaldron heliopais dswan renatomilani rdiaz nuin guhjy myzhang microRNA
	Comparative evaluation of gene-set analysis methods [My Copy] BMC Bioinformatics, Vol. 8, No. 1. (07 November 2007), 431. by Qi Liu, Irina Dinu, Adeniyi Adewale, John Potter, Yutaka Yasui posted to algorithm comparison gene_set_analysis by ealloza on 2007-11-12 11:53:07 as along with 8 people tonamswish daforerog tg150 ptrobajo jfr shigepong idonaldson heliopais
	Pathway and gene-set activation measurement from mRNA expression data: the tissue distribution of human pathways. [My Copy] Genome biology, Vol. 7, No. 10. (17 October 2006), R93. by David M. Levine, David R. Haynor, John C. Castle, et al.Sergey B. Stepaniants, Matteo Pellegrini, Mao Mao, Jason M. Johnson posted to coexpression coherence comparison expression gene_list_analysis gene_set_analysis microarray mrna pathway by ealloza on 2007-06-04 11:07:04 as along with 7 people and 1 group ptrobajo daforerog ipark-kaist fisherp dragonrez jfr heliopais BioinfoCIPF
	Analyzing gene expression data in terms of gene sets: methodological issues [My Copy] Bioinformatics, Vol. 23, No. 8. (15 April 2007), pp. 980-987. by Jelle J. Goeman, Peter Buhlmann posted to algorithm comparison expression functional_annotation gene_set_analysis microarray by ealloza on 2007-03-12 14:39:32 as along with 19 people and 3 groups hzoltan zufar srp33 bertelsen jperkins ptrobajo VGreiff tonamswish ipark-kaist aramesh2 ydhwang shikin raiyar ghattem jfr shigepong heliopais guhjy diging_data SIMR bioinformatics BioinfoCIPF BTS-PT-AS-CS
	Enrichment or depletion of a GO category within a class of genes: which test? [My Copy] Bioinformatics, Vol. 23, No. 4. (15 February 2007), pp. 401-407. by Isabelle Rivals, Leon Personnaz, Lieng Taing, Marie-Claude Potier posted to algorithm comparison expression gene_list_analysis microarray review by ealloza on 2007-02-15 10:51:18 as along with 12 people and 2 groups ipark-kaist phoenixzxl cisevol cmzmasek paszkows winterschlaefer guhjy grahamc capitall zhouyu yas maralena BergmanLab BioinfoCIPF
	A rapid method for microarray cross platform comparisons using gene expression signatures☆ [My Copy] Molecular and Cellular Probes, Vol. 21, No. 1. (10 February 2007), pp. 35-46. by Chris Cheadle, Kevin G. Becker, Yoon S. Cho-Chung, et al.Maria Nesterova, Tonya Watkins, William Wood III, Vinayakumar Prabhu, Kathleen C. Barnes posted to comparison expression gene_set_analysis microarray platform by ealloza on 2006-09-22 14:42:20 as along with 6 people and 2 groups zufar heliopais guhjy jfr neveaire jdiggans microRNA BioinfoCIPF
	OrderedList--a bioconductor package for detecting similarity in ordered gene lists. [My Copy] Bioinformatics (Oxford, England), Vol. 22, No. 18. (15 September 2006), pp. 2315-2316. by Claudio Lottaz, Xinan Yang, Stefanie Scheid, Rainer Spang posted to comparison expression gene_list_analysis microarray by ealloza on 2006-09-07 12:23:44 as along with 3 people and 1 group daforerog ima jdiggans BioinfoCIPF
	Pathways to the analysis of microarray data. [My Copy] Trends in biotechnology, Vol. 23, No. 8. (August 2005), pp. 429-435. by R. Keira Curtis, Matej Oresic, Antonio Vidal-Puig posted to comparison expression functional_annotation gene_set_analysis microarray review by ealloza on 2006-08-22 19:21:44 as along with 11 people and 2 groups bertelsen thomaskelder udivi AlexanderPico jfr saman_vp snuppepuppan textoris Ayest tardigrade heliopais ConklinLab BioinfoCIPF
	Group testing for pathway analysis improves comparability of different microarray data sets. [My Copy] Bioinformatics (7 August 2006) by Theodora Manoli, Norbert Gretz, Hermann-Josef J. Gröne, Marc Kenzelmann, Roland Eils, Benedikt Brors posted to comparison expression functional_annotation gene_set_analysis microarray by ealloza on 2006-08-22 15:19:45 as along with 4 people and 1 group jfr jdiggans macavity1g ptrobajo BioinfoCIPF
	Using the Gene Ontology for Microarray Data Mining: A Comparison of Methods and Application to Age Effects in Human Prefrontal Cortex [My Copy] Neurochemical Research, Vol. 29, No. 6. (June 2004), pp. 1213-1222. by Paul Pavlidis, Jie Qin, Victoria Arango, John J. Mann, Etienne Sibille posted to comparison expression functional_annotation microarray by ealloza on 2006-07-27 14:40:00 as along with 1 person and 1 group dragonrez BioinfoCIPF
	On methods for gene function scoring as a means of facilitating the interpretation of microarray results. [My Copy] J Comput Biol, Vol. 13, No. 3. (April 2006), pp. 798-809. by N. Raghavan, D. Amaratunga, J. Cabrera, A. Nie, J. Qin, M. McMillian posted to comparison expression functional_annotation microarray by ealloza on 2006-07-25 16:22:31 as along with 1 person and 1 group jdiggans BioinfoCIPF

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microrna	180
cancer	123
expression	115
human	106
microarray	102
review	66
gene_set_analysis	53
functional_annotation	52
aberration	48
algorithm	47
target	32
chromosome	25
database	23
prediction	22
regulation	22
gene_list_analysis	20
mrna	18
transcription_factor	16
evolution	14
network	13
pathway	13
signature	13
cgh	12
comparison	11
rearrangement	11
copy_number	10
snp	10
webserver	10
coexpression	9
genome-wide	9
instability	9
ontology	9
profiling	9
disease	8
deletion	7
duplication	7
karyotype	7
meta_analysis	7
rna	7
silencing	7
sirna	7
stem_cell	7
computational	6
ngs	6
protein	6
cluster	5
cnv	5
conservation	5
gene_order	5
interaction	5
map	5
methylation	5
mouse	5
pirna	5
acgh	4
classification	4
clustering	4
cytogenetics	4
epigenetics	4
mining	4
rnai	4
tissue	4
tool	4
virus	4
annotation	3
biomarker	3
correlation	3
editorial	3
embryonic	3
functional	3
gene_fusion	3
homozygosity	3
hotspot	3
interactome	3
metastasis	3
mutation	3
normalization	3
post-transcriptional	3
sequence	3
srna	3
syndrome	3
systems_biology	3
targets	3
technique	3
therapy	3
transcriptome	3
alu	2
amplification	2
animal	2
antisense	2
association	2
bayes	2
block	2
clonal	2
coherence	2
composite	2
dysregulation	2
ebv	2
fish	2
genomics	2
hmm	2
hostgene	2
immunology	2
indel	2
integration	2
intragenic	2
iscn	2
loh	2
mammalian	2
meiosis	2
microarrays	2
microdeletion	2
newsviews	2
oncogenetic_tree_model	2
paleontology	2
pattern	2
permutations	2
platform	2
population	2
promoter	2
repression	2
roh	2
sage	2
selection	2
sky	2
structure	2
suite	2
svd	2
transcription	2
translocation	2
visualisation	2
animal_model	1
apoptosis	1
applet	1
application	1
arabidopsis	1
arrayexpress	1
autozigosity	1
biclustering	1
binomial	1
bioconductor	1
biogenesis	1
brain	1
breast	1
cell_cycle	1
centrosome	1
chimpanzee	1
chip-seq	1
comparative	1
connectivity	1
coregulation	1
cross-platform	1
degradation	1
desease	1
development	1
diagnostic	1
differentiation	1
drosophila	1
endosirna	1
enhance	1
enzyme	1
error_rate	1
essentality	1
essential	1
est	1
evolutionary_rates	1
exon	1
exosome	1
family	1
fly	1
fragile	1
geology	1
hapmap	1
housekeeping_genes	1
igf1	1
imaging	1
immunoprecipitation	1
isomir	1
kegg	1
leukemia	1
library	1
low	1
machine_learning	1
mammals	1
microduplication	1
modeling	1
module	1
motif	1
multivariate	1
mus_musculus	1
nci-60	1
ncrna	1
nervous_system	1
normal	1
nsg	1
p53	1
package	1
pipeline	1
protocol	1
psilac	1
quantification	1
random	1
random_forest	1
regulatory_relationships	1
replication	1
resistance	1
seed	1
signaling	1
specificity	1
strands	1
supressor	1
survival	1
swine	1
tcga	1
territory	1
time_series	1
transcription_factories	1
translation	1
transposition	1
tumor	1
utrs	1
validation	1
variation	1
vertebrate	1
worm	1

ealloza's comparison [11 articles] Export

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