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	Coarse-Grained Biomolecular Simulation with REACH: Realistic Extension Algorithm via Covariance Hessian☆ [My Copy] Biophysical Journal, Vol. 93, No. 10. (15 November 2007), pp. 3460-3469. by K. Moritsugu, J. Smith posted to proteins elastic_network coarse-graining by edws on 2009-11-26 03:04:48 as along with 5 people and 1 group Diego_Prada aqeel hmk sobolevnrm choonpeng baker-group
	Periodic Forces Trigger a Complex Mechanical Response in Ubiquitin [My Copy] Journal of Molecular Biology, Vol. 390, No. 3. (17 July 2009), pp. 443-456. by Piotr Szymczak, Harald Janovjak posted to unfolding ubiquitin proteins coarse-graining by edws on 2009-10-26 06:27:22 as
	Multiscale modeling of polymers at interfaces [My Copy] (16 Oct 2009) by Fathollah Varnik, Kurt Binder posted to polymers coarse-graining by edws on 2009-10-19 16:38:41 as
	Interatomic Potentials from First-Principles Calculations: The Force-Matching Method [My Copy] EPL (Europhysics Letters), Vol. 26, No. 8. (1994), pp. 583-588. by F. Ercolessi, J. B. Adams posted to force_matching coarse-graining by edws on 2009-10-06 02:00:30 as along with 1 person leonhardmayrhofer
	Conformations of proteins in equilibrium. [My Copy] Physical review letters, Vol. 87, No. 8. (20 August 2001) by C. Micheletti, J. R. Banavar, A. Maritan posted to proteins mean-field coarse-graining by edws on 2009-10-05 14:18:07 as
	Colloidal glasses and gels: The interplay of bonding and caging [My Copy] Proceedings of the National Academy of Sciences, Vol. 106, No. 36. (8 September 2009), pp. 15203-15208. by Emanuela Zaccarelli, Wilson C. K. Poon posted to glasses coarse-graining by edws on 2009-09-15 03:46:44 as along with 1 person joshBerryman
	A coarse-grained protein force field for folding and structure prediction [My Copy] Proteins: Structure, Function, and Bioinformatics, Vol. 69, No. 2. (28 June 2007), pp. 394-408. by Julien Maupetit, P. Tuffery, Philippe Derreumaux posted to proteins coarse-graining by edws on 2009-09-10 03:34:21 as along with 2 people wouterboomsma choonpeng
	Replica Exchange Molecular Dynamics Simulations of Coarse-grained Proteins in Implicit Solvent [My Copy] The Journal of Physical Chemistry B, Vol. 113, No. 1. (8 January 2009), pp. 267-274. by Yassmine Chebaro, Xiao Dong, Rozita Laghaei, Philippe Derreumaux, Normand Mousseau posted to proteins free_energy coarse-graining by edws on 2009-09-10 03:19:39 as
	A Mapping of Realistic onto Abstract Polymer Models and an Application to Two Bisphenol Polycarbonates [My Copy] Macromolecules, Vol. 27, No. 5. (1 February 1994), pp. 1249-1255. by W. Paul, N. Pistoor posted to polymer forcefields coarse-graining by edws on 2009-09-09 07:50:42 as
	Coarse grain models and the computer simulation of soft materials [My Copy] Journal of Physics: Condensed Matter, Vol. 16, No. 15. (2004), pp. R481-R512. by Steve O. Nielsen, Carlos F. Lopez, Goundla Srinivas, Michael L. Klein posted to coarse-graining by edws on 2009-09-09 05:03:43 as along with 3 people kaz229 RamuAnandakrishnan softsimu
	Topological and energetic factors: what determines the structural details of the transition state ensemble and “en-route” intermediates for protein folding? an investigation for small globular proteins1 [My Copy] Journal of Molecular Biology, Vol. 298, No. 5. (19 May 2000), pp. 937-953. by Cecilia Clementi, Hugh Nymeyer, José N. Onuchic posted to proteins coarse-graining by edws on 2009-08-28 15:44:23 as along with 2 people aqeel choonpeng
	Coarse-grained modeling of lipids [My Copy] Chemistry and Physics of Lipids, Vol. 159, No. 2. (02 June 2009), pp. 59-66. by Sandra V. Bennun, Matthew I. Hoopes, Chenyue Xing, Roland Faller posted to surfactant coarse-graining by edws on 2009-08-24 08:59:20 as along with 3 people flbarroso sobolevnrm paulschlesinger
	Coarse-grained modeling of interactions of lipid bilayers with supports [My Copy] The Journal of Chemical Physics, Vol. 129, No. 17. (2008), 175102. by Matthew I. Hoopes, Markus Deserno, Margie L. Longo, Roland Faller posted to surfactant coarse-graining by edws on 2009-08-24 03:54:28 as along with 2 people reister paulschlesinger
	Coarse-Grained Simulation Studies of Peptide-Induced Pore Formation☆ [My Copy] Biophysical Journal, Vol. 95, No. 9. (01 November 2008), pp. 4163-4173. by G. Illya, M. Deserno posted to surfactant proteins coarse-graining by edws on 2009-08-24 03:51:24 as along with 2 people agrossfield paulschlesinger
	Biological and synthetic membranes: What can be learned from a coarse-grained description? [My Copy] Physics Reports, Vol. 434, No. 5-6. (November 2006), pp. 113-176. by M. Muller, K. Katsov, M. Schick posted to surfactant review coarse-graining by edws on 2009-08-24 03:46:50 as along with 2 people RamuAnandakrishnan loison
	Solvent-free model for self-assembling fluid bilayer membranes: Stabilization of the fluid phase based on broad attractive tail potentials [My Copy] The Journal of Chemical Physics, Vol. 123, No. 22. (2005), 224710. by Ira R. Cooke, Markus Deserno posted to surfactant coarse-graining by edws on 2009-08-21 04:37:22 as along with 2 people cjryan softsimu
	The multiscale coarse-graining method. I. A rigorous bridge between atomistic and coarse-grained models [My Copy] The Journal of Chemical Physics, Vol. 128, No. 24. (2008), 244114. by W. G. Noid, Jhih W. Chu, Gary S. Ayton, et al.Vinod Krishna, Sergei Izvekov, Gregory A. Voth, Avisek Das, Hans C. Andersen posted to coarse-graining by edws on 2009-08-21 04:28:35 as along with 3 people sunrise softsimu A_Coletta_Thesis
	Coarse-grained simulations of lipid bilayers [My Copy] The Journal of Chemical Physics, Vol. 121, No. 23. (2004), pp. 11942-11948. by Mark J. Stevens posted to surfactant coarse-graining by edws on 2009-08-21 04:27:38 as along with 2 people cjryan sunnytov
	A Multiscale Coarse-Graining Method for Biomolecular Systems [My Copy] The Journal of Physical Chemistry B, Vol. 109, No. 7. (1 February 2005), pp. 2469-2473. by Sergei Izvekov, Gregory A. Voth posted to surfactant coarse-graining by edws on 2009-08-21 04:24:15 as along with 3 people flbarroso A_Coletta_Thesis choonpeng
	The multiscale coarse-graining method. II. Numerical implementation for coarse-grained molecular models [My Copy] The Journal of Chemical Physics, Vol. 128, No. 24. (2008), 244115. by W. G. Noid, Pu Liu, Yanting Wang, et al.Jhih W. Chu, Gary S. Ayton, Sergei Izvekov, Hans C. Andersen, Gregory A. Voth posted to coarse-graining by edws on 2009-08-21 04:18:25 as along with 4 people sunrise softsimu A_Coletta_Thesis agrossfield
	Toy amphiphiles on the computer: What can we learn from generic models? [My Copy] Macromolecular Rapid Communications, Vol. 30, No. 9-10. (2009), pp. 741-751. by Friederike Schmid posted to surfactant self-assembly coarse-graining by edws on 2009-08-21 04:15:52 as along with 1 person agrossfield
	Computer simulations of bilayer membranes: Self-assembly and interfacial tension [My Copy] The Journal of Chemical Physics, Vol. 108, No. 17. (1998), pp. 7397-7409. by Rüdiger Goetz, Reinhard Lipowsky posted to surfactant coarse-graining bilayer by edws on 2009-08-21 03:52:39 as
	Mechanical Properties of Surfactant Bilayer Membranes from Atomistic and Coarse-Grained Molecular Dynamics Simulations [My Copy] The Journal of Physical Chemistry B, Vol. 109, No. 42. (1 October 2005), pp. 19851-19858. by E. S. Boek, J. T. Padding, W. K. den Otter, W. J. Briels posted to surfactant md coarse-graining by edws on 2009-08-14 08:25:15 as

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proteins	66
bibsonomy	37
coarse-graining	23
forces	23
md	20
active	19
surfactant	14
biomineralization	13
networks	13
biomechanics	12
unfolding	12
caco3	11
mechanobiology	11
polymer	10
polymers	10
protein	10
continuum	9
afm	8
elastic	8
cytoskeleton	7
flocking	7
folding	7
hydrodynamics	7
water	7
granular	6
instability	6
cell_adhesion	5
force_network	5
free_energy	5
simulation	5
stability	5
sugar	5
forcefields	4
friction	4
kinetics	4
lattice_boltzmann	4
ubiquitin	4
viscosity	4
biophysics	3
crystal	3
deformation	3
droplets	3
drops	3
experiment	3
flow	3
glycosylation	3
hydrophobicity	3
microfluidics	3
nacre	3
packing	3
spontaneous	3
swimmers	3
weighted	3
adhesion	2
allostery	2
bacteria	2
buckling	2
collapse	2
cyclotide	2
dynamics	2
energy_transfer	2
flexibility	2
fracture	2
imported	2
interfaces	2
ions	2
jamming	2
knot	2
normal_modes	2
numerical_solution	2
polarizable	2
review	2
rheology	2
self-assembly	2
viscoelastic	2
actin_filaments	1
bilayer	1
blood_clots	1
bonds	1
boundary_layers	1
branched	1
bubbles	1
budding	1
capillarity	1
channels	1
colloidal_particles	1
crack	1
dispersion	1
docking	1
elastic_network	1
electrokinetics	1
electrostatic_forces	1
fiber_bundle	1
fibrin	1
flow_visualisation	1
force_matching	1
functions	1
glasses	1
glassy	1
integral_equations	1
integrals	1
kinesin	1
knottin	1
mean-field	1
microtubule	1
microtubules	1
multiscale	1
nanotubes	1
nug2	1
patches	1
polyaspartate	1
porous_media	1
python	1
qm	1
reynolds_number	1
rna	1
shear_flow	1
slip	1
solvent_effects	1
speed_of_sound	1
spheres	1
stokes_law	1
stresses	1
structure	1
teaching	1
thermal_activation	1
titin	1
transport	1
two-phase_flow	1
velocity_distribution	1
viscous_flow	1
wavelet	1
wlc	1

edws's coarse-graining [23 articles] Export

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