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efierema's watchlist [1000+ articles]

Recent papers matching efierema's watchlist criteria
  • Computer modelling of epilepsy.
    Nature reviews. Neuroscience (2 July 2008)
    by William W W Lytton
    posted to modelling inhibitory-transmission excitatory-transmission epilepsy computer-simulation by TJ80 on 2008-07-09 12:52:46 as ***
  • Computer immunology
    Immunological Reviews, Vol. 216, No. 1. (April 2007), pp. 176-197.
    by Stephanie Forrest, Catherine Beauchemin
    posted to modelling ais by thefillm on 2008-07-08 23:49:06 as ** along with 2 people alfzurkin fragglberri
  • From the editors
    Nat Rev Genet, Vol. 7, No. 10. (October 2006), pp. 737-737.
    posted to techniques modelling by kieran101 on 2008-07-08 13:53:52 as **
  • A tutorial on statistical methods for population association studies
    Nature Reviews Genetics, Vol. 7, No. 10., pp. 781-791.
    by David J Balding
    posted to techniques modelling by kieran101 on 2008-07-08 13:47:20 as ** along with 6 people and 1 group jyuh jermth giovanni joepickrell dbgrant jo_davies GeschwindLab
  • HIV-1 subtype B protease and reverse transcriptase amino acid covariation.
    PLoS Comput Biol, Vol. 3, No. 5. (11 May 2007)
    by SY Rhee, TF Liu, SP Holmes, RW Shafer
    posted to techniques rt protease modelling by kieran101 on 2008-07-08 11:47:17 as ** along with 1 person cjeans
  • Can three-dimensional contacts in protein structures be predicted by analysis of correlated mutations?
    Protein Eng, Vol. 7, No. 3. (March 1994), pp. 349-358.
    by IN Shindyalov, NA Kolchanov, C Sander
    posted to structure modelling by kieran101 on 2008-07-08 09:24:27 as ** along with 2 people gbart nirfriedman
  • Mathematical Models In Biology
    (01 January 1988)
    by Leah Edelstein-Keshet
    posted to ode modelling math biology by sstoma on 2008-07-07 18:33:23 as ** along with 1 group VirtualPlants
  • NMR Studies of Aggregation and Hydration of Surfactants Containing Amide Bonds
    J. Phys. Chem. B, Vol. 111, No. 8. (1 March 2007), pp. 2008-2014.
    by M Stjerndahl, D Lundberg, H Zhang, FM Menger
    posted to nmr diffusion detergents by rph on 2008-07-07 18:28:23 as *****
  • Automated macromolecular model building for X-ray crystallography using ARP/wARP version 7.
    Nature protocols, Vol. 3, No. 7. (June 2008), pp. 1171-1179.
    by Gerrit Langer, Serge X X Cohen, Victor S S Lamzin, Anastassis Perrakis
    posted to xray software protocol modelling crystallography by neils on 2008-07-06 01:25:43 as **
  • Exponential Decay Towards Equilibrium for the Inhomogeneous Aizenman-Bak Model
    Communications in Mathematical Physics, Vol. 278, No. 2. (24 March 2008), pp. 433-451.
    by J Carrillo, L Desvillettes, K Fellner
    posted to fragmentation entropy diffusion coagulation by ozarfreo on 2008-07-04 14:15:46 as **
  • Analysis of Natural Sequence Variation and Covariation in Human Immunodeficiency Virus Type-1 Integrase
    J. Virol. (2 July 2008), JVI.01535-07.
    by Richard E Myers, Deenan Pillay
    posted to modelling integrase by kieran101 on 2008-07-04 14:02:14 as **
  • Measuring Diffusion and Binding Kinetics by Contact Area FRAP
    Biophys. J., Vol. 95, No. 2. (15 July 2008), pp. 920-930.
    by Timothy P Tolentino, Jianhua Wu, Veronika I Zarnitsyna, Ying Fang, Michael L Dustin, Cheng Zhu
    posted to tolent08pdf kinetics frap diffusion binding by paulschlesinger on 2008-07-03 19:02:36 as **
  • A Coupled Diffusion-Kinetics Model for Analysis of Contact-Area FRAP Experiment
    Biophys. J., Vol. 95, No. 2. (15 July 2008), pp. 910-919.
    by Jianhua Wu, Ying Fang, Veronika I Zarnitsyna, Timothy P Tolentino, Michael L Dustin, Cheng Zhu
    posted to wu08pdf measurements frap diffusion by paulschlesinger on 2008-07-03 19:01:41 as **
  • Modelling climate change-driven treeline shifts: Relative effects of temperature increase, dispersal and invasibility
    J. Ecol., Vol. 92, No. 2. (2004), pp. 241-252.
    by S Dullinger, T Dirnbo?ck, G Grabherr
    posted to climate treeline shift modelling 2nopdf 1cvl by iwagner on 2008-07-03 09:07:50 as **
  • A biome classification of China based on plant functional types and the BIOME3 model
    Folia Geobotanica, Vol. 36, No. 2. (11 June 2001), pp. 113-129.
    by Jian Ni
    posted to plant modelling classification biome 3china by iwagner on 2008-07-03 08:49:13 as ** along with 1 group BrahmaTWinn
  • Effects of flooding on the recruitment, damage and mortality of riparian tree species: A field and simulation study on the Rhine floodplain
    Forest Ecology and Management, Vol. 255, No. 11. (15 June 2008), pp. 3893-3903.
    by Koen Kramer, Stefan J Vreugdenhil, DC van der Werf
    posted to floodplains forest riparian modelling flooding 3germany 0fuzzyveg by iwagner on 2008-07-02 21:22:59 as **
  • Integrated ecological assessment of biophysical wetland habitat in water catchments: Linking hydro-ecological modelling with geo-information techniques
    Ecological Modelling, Vol. 214, No. 2-4. (24 June 2008), pp. 411-420.
    by Demin Zhou, Huili Gong, Zhaoli Liu
    posted to wetlands modelling gis ecohydrology catchment assessment 0fuzzyveg by iwagner on 2008-07-02 21:08:25 as ** along with 1 group Remote Sensing & GIS
  • Covariation of amino acid positions in HIV-1 protease.
    Virology, Vol. 314, No. 2. (30 September 2003), pp. 536-548.
    by NG Hoffman, CA Schiffer, R Swanstrom
    posted to protease modelling by kieran101 on 2008-07-02 14:27:45 as **
  • Distinguishing functional amino acid covariation from background linkage disequilibrium in HIV protease and reverse transcriptase.
    PLoS ONE, Vol. 2, No. 8. (2007)
    by Q Wang, C Lee
    posted to modelling by kieran101 on 2008-07-02 14:24:05 as **
  • A Case Study on Human Upper Limb Modelling for Dynamic Simulation.
    Computer methods in biomechanics and biomedical engineering, Vol. 2, No. 1. (1999), pp. 65-82.
    by WALTER Maurel, DANIEL Thalmann
    posted to modelling kinematics arm by peteculmer on 2008-07-02 11:47:52 as read
  • Anomalous diffusion in purkinje cell dendrites caused by spines.
    Neuron, Vol. 52, No. 4. (22 November 2006), pp. 635-648.
    by F Santamaria, S Wils, E De Schutter, GJ Augustine
    posted to stochastic spatial neuron modelling gfrd diffusion by lenov on 2008-07-01 14:55:43 as ** along with 2 people jerlich tmiya
  • LUCAS: an original tool for landscape modelling
    Environmental Modelling & Software, Vol. 18, No. 5. (June 2003), pp. 429-437.
    by El, El, P Jacewicz, JG Pausas
    posted to modelling landscape by pausas on 2008-07-01 11:20:19 as ** along with 1 person skosta
  • An Electrostatic Steering Mechanism of Cdc42 Recognition by Wiskott-Aldrich Syndrome Proteins
    Molecular Cell, Vol. 20, No. 2. (28 October 2005), pp. 313-324.
    by Lars Hemsath, Radovan Dvorsky, Dennis Fiegen, Marie-France Carlier, Mohammad R Ahmadian
    posted to protein-protein_interactions kinetics electrostatics diffusion by sobolevnrm on 2008-07-01 02:55:16 as read along with 1 person and 1 group mikaellund baker-group
  • Scaling of the time-dependent self-diffusion coefficient and the propagation of hydrodynamic interactions
    Physical Review E, Vol. 51, No. 1. (1 January 1995), 803.
    by Pep Español, Miguel A Rubio, Ignacio Zúñiga
    posted to dpd diffusion by softsimu on 2008-06-27 21:44:38 as **
  • Measurement and calculation of nonlinear absorption associated with femtosecond filaments in water
    Applied Physics B: Lasers and Optics, Vol. 84, No. 3. (2006), pp. 439-446.
    by A Dubietis, A Couairon, E Kučinskas, G Tamošauskas, E Gaižauskas, D Faccio, P Di Trapani
    posted to modelling femtoplasma by mezentsev on 2008-06-27 14:15:05 as **
  • A Dirichlet process model for detecting positive selection in protein-coding DNA sequences.
    Proc Natl Acad Sci U S A, Vol. 103, No. 16. (18 April 2006), pp. 6263-6268.
    by JP Huelsenbeck, S Jain, SW Frost, SL Pond
    posted to modelling by kieran101 on 2008-06-27 11:37:45 as ** along with 2 people ejeffery dmc
  • Something from nothing -- bridging the gap between constraint-based and kinetic modelling
    FEBS Journal, Vol. 274, No. 21. (November 2007), pp. 5576-5585.
    by Kieran Smallbone, Evangelos Simeonidis, David S Broomhead, Douglas B Kell
    posted to modelling metabolism kinetics by pmendes on 2008-06-26 14:17:15 as ** along with 2 people and 1 group peterli dbk dbk-lab
  • Dynamic simulation and metabolic re-design of a branched pathway using linlog kinetics.
    Metabolic engineering, Vol. 5, No. 3. (July 2003), pp. 164-176.
    by D Visser, JJ Heijnen
    posted to modelling mca kinetics by pmendes on 2008-06-26 13:58:38 as **
  • Approximative kinetic formats used in metabolic network modeling
    Biotechnology and Bioengineering, Vol. 91, No. 5. (2005), pp. 534-545.
    by Joseph J Heijnen
    posted to review modelling kinetics by pmendes on 2008-06-26 13:56:14 as *** along with 1 person fishtank
  • Asymptotic laws for tagged-particle motion in glassy systems
    Physical Review E, Vol. 58, No. 3. (1998), 3384.
    by M Fuchs, W Götze, MR Mayr
    posted to glasses diffusion by softsimu on 2008-06-25 20:37:26 as **
  • Subdiffusive dynamics of a liquid crystal in the isotropic phase
    The Journal of Chemical Physics, Vol. 128, No. 19. (2008)
    by Luca De Gaetani, Giacomo Prampolini, Alessandro Tani
    posted to glasses diffusion by softsimu on 2008-06-25 19:23:19 as **
  • Following microscopic motion in a two-dimensional glass-forming binary fluid
    Journal of Physics: Condensed Matter, Vol. 20, No. 24. (2008), 244127.
    by Matthew T Downton, Malcolm P Kennett
    posted to glasses diffusion by softsimu on 2008-06-25 19:22:09 as ** along with 1 person weeks
  • Self-Guided Propagation of Ultrashort IR Laser Pulses in Fused Silica
    Physical Review Letters, Vol. 87, No. 21. (2 November 2001), 213902.
    by S Tzortzakis, L Sudrie, M Franco, B Prade, A Mysyrowicz, A Couairon, L Bergé
    posted to musthave modelling by mezentsev on 2008-06-25 15:48:49 as **
  • Electric Fields Due to Synaptic Currents Sharpen Excitatory Transmission
    Science, Vol. 319, No. 5871. (28 March 2008), pp. 1845-1849.
    by Sergiy Sylantyev, Leonid P Savtchenko, Yin-Ping Niu, Anton I Ivanov, Thomas P Jensen, Dimitri M Kullmann, Min-Yi Xiao, Dmitri A Rusakov
    posted to outside-out integration glutamate electrodiffusion diffusion ampa 2-photon by TJ80 on 2008-06-25 08:37:30 as read along with 4 people nelmor davidlott starz1010101 tyrell_turing
  • Translational diffusion of flexible lipid chains in a Langmuir monolayer: A dynamic Monte Carlo study
    Physical Review E, Vol. 60, No. 1. (1 July 1999), 814.
    by T Sintes, A Baumgaertner, YK Levine
    posted to monte-carlo monolayers membranes diffusion by softsimu on 2008-06-23 21:53:15 as **
  • Lipid domains as obstacles for lateral diffusion in supported bilayers probed at different time and length scales by two-dimensional exchange and field gradient solid state NMR
    Physical Review E, Vol. 55, No. 4. (1 April 1997), 4512.
    by C Dolainsky, P Karakatsanis, TM Bayerl
    posted to membranes domains diffusion by softsimu on 2008-06-23 21:46:22 as **
  • Non-Brownian Diffusion of Membrane Molecules in Nanopatterned Supported Lipid Bilayers
    Nano Lett. (19 January 2008)
    by J Tsai, E Sun, Y Gao, JC Hone, LC Kam
    posted to supported-bilaters diffusion by softsimu on 2008-06-23 21:30:44 as ** along with 1 person paulschlesinger
  • Complexity reduction of biochemical rate expressions
    Bioinformatics, Vol. 24, No. 6. (15 March 2008), pp. 848-854.
    by Schmidt, Henning, Madsen, F Mads, A Dan, Sune, Cedersund, Gunnar
    posted to sbsi modelling by lptolik on 2008-06-23 19:26:10 as **
  • Extending Genomics to Natural Communities and Ecosystems
    Science, Vol. 320, No. 5875. (25 April 2008), pp. 492-495.
    by Thomas G Whitham, Stephen P Difazio, Jennifer A Schweitzer, Stephen M Shuster, Gery J Allan, Joseph K Bailey, Scott A Woolbright
    posted to multi-level modelling community by jago on 2008-06-23 11:51:13 as ** along with 5 people and 1 group farhat natstreet brant neteler ArtemPankin Khavkin's lab
  • Pattern-Oriented Modeling of Agent-Based Complex Systems: Lessons from Ecology
    Science, Vol. 310, No. 5750. (11 November 2005), pp. 987-991.
    by Volker Grimm, Eloy Revilla, Uta Berger, Florian Jeltsch, Wolf M Mooij, Steven F Railsback, Hans-Hermann Thulke, Jacob Weiner, Thorsten Wiegand, Donald L Deangelis
    posted to pattern-orientation modelling mas by jago on 2008-06-23 11:40:21 as ** along with 7 people and 6 groups skumagai scholz e2holmes pverstra mhucka arasbm linxiang Pervasive Healthcare Global_health_enterprise_architecture Sociology Stoc_Proc_Ecology_WG macc MASSS
  • The Role of Occam's Razor in Knowledge Discovery
    Data Min. Knowl. Discov., Vol. 3, No. 4. (December 1999), pp. 409-425.
    by Pedro Domingos
    posted to statistics science philosophy modelling by mattjb on 2008-06-23 01:53:10 as ** along with 2 groups DSTO-CAS ComplexAdaptiveSystems
  • Hierarchical Markovian modeling of multi-time scale systems
    (26 Feb 2002)
    by M Abel, KH Andersen, G Lacorata
    posted to modelling causality by mattjb on 2008-06-23 00:16:34 as ** along with 2 groups DSTO-CAS ComplexAdaptiveSystems
  • Limit Laws and Recurrence for the Planar Lorentz Process with Infinite Horizon
    Journal of Statistical Physics, Vol. 129, No. 1. (13 October 2007), pp. 59-80.
    by Domokos Szász, Tamás Varjú
    posted to lorentz-gas diffusion by dsanders on 2008-06-20 23:41:08 as **
  • On the combustion kinetics of heterogeneous char particle populations
    Symposium (International) on Combustion, Vol. 24, No. 1. (1992), pp. 1233-1241.
    by RH Hurt, RE Mitchell
    posted to modelling combustion coal by mighelone on 2008-06-20 10:15:04 as **
  • The intrinsic reactivity of carbons to oxygen
    Fuel, Vol. 57, No. 7. (July 1978), pp. 409-414.
    by Ian W Smith
    posted to modelling combustion coal by mighelone on 2008-06-20 10:01:46 as **
  • Coal devolatilization at high temperatures
    Symposium (International) on Combustion, Vol. 16, No. 1. (1977), pp. 411-425.
    by H Kobayashi, JB Howard, AF Sarofim
    posted to modelling combustion coal by mighelone on 2008-06-20 09:06:10 as **
  • The combustion rates of coal chars: A review
    Symposium (International) on Combustion, Vol. 19, No. 1. (1982), pp. 1045-1065.
    by IW Smith
    posted to modelling combustion coal by mighelone on 2008-06-20 09:02:28 as **
  • Modelling opportunity capture: a framework for port growth
    Maritime Policy & Management, Vol. 35, No. 3. (2008), pp. 285-311.
    by Mateus Magala
    posted to value-articulation strategy port opportunity-capture modelling growth competition by jago on 2008-06-20 08:45:42 as ** along with 2 groups kpa-resources Global_health_enterprise_architecture
  • Diffusion models of mobile telephony in Greece
    Telecommunications Policy, Vol. 32, No. 3-4. ( 2008), pp. 234-245.
    by Christos Michalakelis, Dimitris Varoutas, Thomas Sphicopoulos
    posted to wireless telecommunications technology_management technoeconomics regulation operators network_economics networkeconomics mobile engineering_management diffusion competition by arkas to the group UoA_ODT on 2008-06-19 22:38:54 as read
  • The analysis of grain boundary diffusion measurements
    British Journal of Applied Physics, Vol. 14, No. 6. (1963), pp. 351-356.
    by Le AD Claire
    posted to theory diffusion by polyparadigm on 2008-06-18 23:38:15 as ****
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