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elfar's no-tag [17 articles]

Recent papers added to elfar's library classified by the tag no-tag. You can also see everyone's no-tag.
  • Some molecular details of the secondary structure of ribonucleic acid.
    Nature, Vol. 188 (8 October 1960), pp. 98-101.
    by JR FRESCO, BM ALBERTS, P DOTY
    posted to no-tag by elfar on 2008-04-28 10:04:14 as **
  • Genome scale search of noncoding RNAs Bacteria to Vertebrates
    (2008)
    by Zizhen Yao
    posted to no-tag by elfar on 2008-04-24 12:40:11 as **
  • Initial sequencing and comparative analysis of the mouse genome.
    Nature, Vol. 420, No. 6915. (5 December 2002), pp. 520-562.
    by RH Waterston, K Lindblad-Toh, E Birney, J Rogers, JF Abril, P Agarwal, R Agarwala, R Ainscough, M Alexandersson, P An, SE Antonarakis, J Attwood, R Baertsch, J Bailey, K Barlow, S Beck, E Berry, B Birren, T Bloom, P Bork, M Botcherby, N Bray, MR Brent, DG Brown, SD Brown, C Bult, J Burton, J Butler, RD Campbell, P Carninci, S Cawley, F Chiaromonte, AT Chinwalla, DM Church, M Clamp, C Clee, FS Collins, LL Cook, RR Copley, A Coulson, O Couronne, J Cuff, V Curwen, T Cutts, M Daly, R David, J Davies, KD Delehaunty, J Deri, ET Dermitzakis, C Dewey, NJ Dickens, M Diekhans, S Dodge, I Dubchak, DM Dunn, SR Eddy, L Elnitski, RD Emes, P Eswara, E Eyras, A Felsenfeld, GA Fewell, P Flicek, K Foley, WN Frankel, LA Fulton, RS Fulton, TS Furey, D Gage, RA Gibbs, G Glusman, S Gnerre, N Goldman, L Goodstadt, D Grafham, TA Graves, ED Green, S Gregory, R Guigó, M Guyer, RC Hardison, D Haussler, Y Hayashizaki, LW Hillier, A Hinrichs, W Hlavina, T Holzer, F Hsu, A Hua, T Hubbard, A Hunt, I Jackson, DB Jaffe, LS Johnson, M Jones, TA Jones, A Joy, M Kamal, EK Karlsson, D Karolchik, A Kasprzyk, J Kawai, E Keibler, C Kells, WJ Kent, A Kirby, DL Kolbe, I Korf, RS Kucherlapati, EJ Kulbokas, D Kulp, T Landers, JP Leger, S Leonard, I Letunic, R Levine, J Li, M Li, C Lloyd, S Lucas, B Ma, DR Maglott, ER Mardis, L Matthews, E Mauceli, JH Mayer, M McCarthy, WR McCombie, S McLaren, K McLay, JD McPherson, J Meldrim, B Meredith, JP Mesirov, W Miller, TL Miner, E Mongin, KT Montgomery, M Morgan, R Mott, JC Mullikin, DM Muzny, WE Nash, JO Nelson, MN Nhan, R Nicol, Z Ning, C Nusbaum, MJ O'Connor, Y Okazaki, K Oliver, E Overton-Larty, L Pachter, G Parra, KH Pepin, J Peterson, P Pevzner, R Plumb, CS Pohl, A Poliakov, TC Ponce, CP Ponting, S Potter, M Quail, A Reymond, BA Roe, KM Roskin, EM Rubin, AG Rust, R Santos, V Sapojnikov, B Schultz, J Schultz, MS Schwartz, S Schwartz, C Scott, S Seaman, S Searle, T Sharpe, A Sheridan, R Shownkeen, S Sims, JB Singer, G Slater, A Smit, DR Smith, B Spencer, A Stabenau, N Stange-Thomann, C Sugnet, M Suyama, G Tesler, J Thompson, D Torrents, E Trevaskis, J Tromp, C Ucla, A Ureta-Vidal, JP Vinson, AC Von Niederhausern, CM Wade, M Wall, RJ Weber, RB Weiss, MC Wendl, AP West, K Wetterstrand, R Wheeler, S Whelan, J Wierzbowski, D Willey, S Williams, RK Wilson, E Winter, KC Worley, D Wyman, S Yang, SP Yang, EM Zdobnov, MC Zody, ES Lander,
    posted to no-tag by elfar on 2008-04-16 19:56:17 as ** along with 17 people and 2 groups OriginalLurch dkulp sdinka Cortel jwortman Dax42 aprasad ccots indigoviolet adepace treangen joshuashen djkt stajich olympos hausen yoanjacquemin EisenLab Berkeley Mycology
  • Probabilistic whole-genome alignments reveal high indel rates in the human and mouse genomes.
    Bioinformatics, Vol. 23, No. 13. (1 July 2007)
    by G Lunter
    posted to no-tag by elfar on 2008-04-16 19:51:25 as ** along with 3 people and 1 group aprasad AaronDarling mailund Bioinformatics
  • The MC-Fold and MC-Sym pipeline infers RNA structure from sequence data
    Nature, Vol. 452, No. 7183., pp. 51-55.
    by Marc Parisien, François Major
    posted to no-tag by elfar on 2008-04-14 17:47:08 as ** along with 3 people reyez austin zwang
  • Fast Pairwise Structural RNA Alignments by Pruning of the Dynamical Programming Matrix.
    PLoS Comput Biol, Vol. 3, No. 10. (12 October 2007)
    by Jakob H H Havgaard, Elfar Torarinsson, Jan Gorodkin
    posted to no-tag by elfar on 2008-04-14 15:16:11 as ** along with 2 people mtagaya fabsta
  • Evolutionary trees from DNA sequences: a maximum likelihood approach.
    J Mol Evol, Vol. 17, No. 6. (1981), pp. 368-376.
    by J Felsenstein
    posted to no-tag by elfar on 2008-04-10 09:42:49 as ** along with 7 people and 1 group bpb chrn kaspermunch dquest djkt timflutre dmc Bioinformatics
  • Evolutionary rate at the molecular level.
    Nature, Vol. 217, No. 5129. (17 February 1968), pp. 624-626.
    by M Kimura
    posted to no-tag by elfar on 2008-04-10 09:41:20 as ** along with 1 person timflutre
  • RNA Multi-Structure Landscapes - A Study Based on Temperature Dependent Partition Functions
    EUROPEAN BIOPHYSICS JOURNAL WITH BIOPHYSICS LETTERS, Vol. 22 (1993), pp. 13-24.
    by Sebastian Bonhoeffer, John S Mccaskill, Peter F Stadler, Peter Schuster
    posted to no-tag by elfar on 2008-04-10 09:08:01 as **
  • Structural RNA has lower folding energy than random RNA of the same dinucleotide frequency
    RNA, Vol. 11, No. 5. (1 May 2005), pp. 578-591.
    by Peter Clote, Fabrizio Ferre, Evangelos Kranakis, Danny Krizanc
    posted to no-tag by elfar on 2008-04-09 12:05:39 as ** along with 2 people and 2 groups marcius arcticrasta BioinfoCIPF SGU-CIPF
  • Consensus folding of aligned sequences as a new measure for the detection of functional RNAs by comparative genomics.
    J Mol Biol, Vol. 342, No. 1. (3 September 2004), pp. 19-30.
    by S Washietl, IL Hofacker
    posted to no-tag by elfar on 2008-04-09 11:49:51 as ** along with 4 people dayjm arcticrasta Eonwe ilh
  • RNA sequence analysis using covariance models.
    Nucleic Acids Res, Vol. 22, No. 11. (11 June 1994), pp. 2079-2088.
    by SR Eddy, R Durbin
    posted to no-tag by elfar on 2008-04-09 09:42:02 as ** along with 4 people and 1 group evaf arcticrasta vwchan raylim beta
  • Evolutionarily conserved elements in vertebrate, insect, worm, and yeast genomes.
    Genome Res, Vol. 15, No. 8. (August 2005), pp. 1034-1050.
    by A Siepel, G Bejerano, JS Pedersen, AS Hinrichs, M Hou, K Rosenbloom, H Clawson, J Spieth, LW Hillier, S Richards, GM Weinstock, RK Wilson, RA Gibbs, WJ Kent, W Miller, D Haussler
    posted to no-tag by elfar on 2008-04-09 08:37:54 as ** along with 14 people and 2 groups pradiptaray bpb aprasad balajis eckart_bindewald indigoviolet brant adepace djkt olympos sujaikumar Stew cisevol dmc EisenLab cis-regulatory-evolution
  • Identification of 22 candidate structured RNAs in bacteria using the CMfinder comparative genomics pipeline
    Nucl. Acids Res. (9 July 2007), gkm487.
    by Zasha Weinberg, Jeffrey E Barrick, Zizhen Yao, Adam Roth, Jane N Kim, Jeremy Gore, Joy X Wang, Elaine R Lee, Kirsten F Block, Narasimhan Sudarsan, Shane Neph, Martin Tompa, Walter L Ruzzo, Ronald R Breaker
    posted to no-tag by elfar on 2008-04-09 08:13:31 as ** along with 2 people Hosna ceciklein
  • Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project.
    Nature, Vol. 447, No. 7146. (14 June 2007), pp. 799-816.
    by The
    posted to no-tag by elfar on 2008-04-07 17:53:10 as ** along with 9 people and 2 groups jyuh jfr chad_davis kengg olympos blobbybirdman shikin fpattyn yevishere Bioinformatics UH - Computational Biology
  • Searching protein sequence libraries: Comparison of the sensitivity and selectivity of the Smith-Waterman and FASTA algorithms
    Genomics, Vol. 11, No. 3. (November 1991), pp. 635-650.
    by William R Pearson
    posted to no-tag by elfar on 2008-04-07 17:39:34 as **
  • Query-Dependent Banding (QDB) for Faster RNA Similarity Searches
    PLoS Computational Biology, Vol. 3, No. 3. (1 March 2007), e56.
    by Eric P Nawrocki, Sean R Eddy
    posted to no-tag by elfar on 2008-04-07 14:54:13 as ** along with 1 person zwang
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