eoghanharr's library 40 articles Export

	Pathways of Carbon Assimilation and Ammonia Oxidation Suggested by Environmental Genomic Analyses of Marine Crenarchaeota [My Copy] PLoS Biology, Vol. 4, No. 4. (1 April 2006), e95. by Steven J. Hallam, Tracy J. Mincer, Christa Schleper, et al.Christina M. Preston, Katie Roberts, Paul M. Richardson, Edward F. Delong posted to metagenomics pathway sea by eoghanharr on 2006-12-12 15:45:40 as
	An analysis of the Sargasso Sea resource and the consequences for database composition. [My Copy] BMC Bioinformatics, Vol. 7 (2006) by M. L. Tress, D. Cozzetto, A. Tramontano, A. Valencia posted to metagenomics sargasso by eoghanharr on 2006-11-02 16:59:58 as along with 4 people and 3 groups operon ana jmeppley Thaverkamp structural_bioinformatics Bioinformatics Microbial-Ecology
	Errors in genome annotation. [My Copy] Trends Genet, Vol. 15, No. 4. (April 1999), pp. 132-133. by S. E. Brenner posted to no-tag by eoghanharr on 2006-11-02 16:57:29 as
	Community Genomics Among Stratified Microbial Assemblages in the Ocean's Interior [My Copy] Science, Vol. 311, No. 5760. (27 January 2006), pp. 496-503. by Edward F. Delong, Christina M. Preston, Tracy Mincer, et al.Virginia Rich, Steven J. Hallam, Niels-Ulrik Frigaard, Asuncion Martinez, Matthew B. Sullivan, Robert Edwards, Beltran R. Brito, Sallie W. Chisholm, David M. Karl posted to community marine metagenomics by eoghanharr on 2006-11-02 10:00:22 as along with 15 people and 5 groups hwright anphony Thaverkamp skembel dayjm jmeppley michC bluto jdelcampo beatrizfernandez mjetten mcox vrich jlgreen djkt Savage Lab, UCLA Microbial-Ecology microbiology_nijmegen Green Lab iSEEM
	Genomics and evolution. Shotgun sequencing in the sea: a blast from the past? [My Copy] Science, Vol. 304, No. 5667. (2 April 2004), pp. 58-60. by P. G. Falkowski, C. de Vargas posted to metagenomics sargasso by eoghanharr on 2006-11-02 09:59:20 as along with 1 person jbhiatt
	Environmental Genome Shotgun Sequencing of the Sargasso Sea [My Copy] Science, Vol. 304, No. 5667. (2 April 2004), pp. 66-74. by J. Craig Venter, Karin Remington, John F. Heidelberg, et al.Aaron L. Halpern, Doug Rusch, Jonathan A. Eisen, Dongying Wu, Ian Paulsen, Karen E. Nelson, William Nelson, Derrick E. Fouts, Samuel Levy, Anthony H. Knap, Michael W. Lomas, Ken Nealson, Owen White, Jeremy Peterson, Jeff Hoffman, Rachel Parsons, Holly Baden-Tillson, Cynthia Pfannkoch, Yu-Hui Rogers, Hamilton O. Smith posted to metagenomics sargasso by eoghanharr on 2006-11-02 09:56:52 as along with 20 people and 2 groups skembel esyoun Thaverkamp jbhiatt kinestetika knaseanka johanviklund bpb jmeppley balajis eweaver AaronDarling bluto jdelcampo azazello beatrizfernandez wenhan pradiptaray mcox vrich microbiology_nijmegen Microbial-Ecology
	Overlapping genes as rare genomic markers: the phylogeny of [gamma]-Proteobacteria as a case study [My Copy] Trends in Genetics, Vol. 22, No. 11. (November 2006), pp. 593-596. by Yingqin Luo, Cong Fu, Da-Yong Zhang, Kui Lin posted to no-tag by eoghanharr on 2006-10-31 14:40:10 as along with 1 person druvus
	Comparative Genome Analysis of the Neurexin Gene Family in Danio rerio: Insights into Their Functions and Evolution. [My Copy] Mol Biol Evol (13 October 2006) by Alberto Rissone, Matteo Monopoli, Monica Beltrame, Federico Bussolino, Franco Cotelli, Marco Arese posted to alternative_splicing evolution neurexin by eoghanharr on 2006-10-18 10:22:12 as along with 1 person niuniu6
	NF-Ya activates multiple hematopoietic stem cell (HSC) regulatory genes and promotes HSC self-renewal. [My Copy] Proc Natl Acad Sci U S A, Vol. 102, No. 33. (16 August 2005), pp. 11728-11733. by J. Zhu, Y. Zhang, G. J. Joe, R. Pompetti, S. G. Emerson posted to alternative_splicing factor transcription by eoghanharr on 2006-10-04 09:50:17 as
	Comparative study of overlapping genes in the genomes of Mycoplasma genitalium and Mycoplasma pneumoniae [My Copy] Nucl. Acids Res., Vol. 27, No. 8. (15 April 1999), pp. 1847-1853. by Y. Fukuda, T. Washio, M. Tomita posted to genes overlapping by eoghanharr on 2006-09-27 15:15:43 as along with 1 person operon
	Properties of overlapping genes are conserved across microbial genomes [My Copy] Genome Res., Vol. 14, No. 11. (1 November 2004), pp. 2268-2272. by Zackary I. Johnson, Sallie W. Chisholm posted to genes overlapping by eoghanharr on 2006-09-27 15:13:28 as along with 1 person druvus
	Alternative splicing in concert with protein intrinsic disorder enables increased functional diversity in multicellular organisms [My Copy] PNAS, Vol. 103, No. 22. (30 May 2006), pp. 8390-8395. by Pedro R. Romero, Saima Zaidi, Ya Y. Fang, et al.Vladimir N. Uversky, Predrag Radivojac, Christopher J. Oldfield, Marc S. Cortese, Megan Sickmeier, Tanguy Legall, Zoran Obradovic, Keith A. Dunker posted to as disorder evolution regulation by eoghanharr on 2006-09-20 14:53:09 as along with 2 people and 3 groups dchughes stajich G4ID Genetics-of-Gambling Mycology
	Mechanistic links between nonsense-mediated mRNA decay and pre-mRNA splicing in mammalian cells [My Copy] Current Opinion in Cell Biology In Nucleus and gene expression, Vol. 17, No. 3. (June 2005), pp. 309-315. by Fabrice Lejeune, Lynne E. Maquat posted to mechanism nmd by eoghanharr on 2006-09-19 12:54:15 as
	Comparison of multiple vertebrate genomes reveals the birth and evolution of human exons [My Copy] Proceedings of the National Academy of Sciences, Vol. 103, No. 36. (5 September 2006), pp. 13427-13432. by Xiang H. F. Zhang, Lawrence A. Chasin posted to alternative_splicing evolution by eoghanharr on 2006-09-08 12:34:34 as along with 5 people and 3 groups operon aprasad dayjm dchughes paulcartwright G4ID Genetics-of-Gambling BergmanLab
	Using several pair-wise informant sequences for de novo prediction of alternatively spliced transcripts. [My Copy] Genome Biol, Vol. 7 Suppl 1 (2006) by P. Flicek, M. R. Brent posted to alternative_splicing prediction by eoghanharr on 2006-08-30 15:34:24 as along with 1 person and 1 group wenhan Bioinformatics
	Protein molecular function prediction by Bayesian phylogenomics. [My Copy] PLoS computational biology, Vol. 1, No. 5. (7 October 2005) by B. E. Engelhardt, M. I. Jordan, K. E. Muratore, S. E. Brenner posted to phylogenomics by eoghanharr on 2006-08-22 09:56:46 as along with 9 people and 4 groups sgoetz engelhardt kentsis ana Einat dlr marcius sriram_s bootsy structural_bioinformatics Bioinformatics BioinfoCIPF SGU-CIPF
	Large-scale identification and characterization of alternative splicing variants of human gene transcripts using 56 419 completely sequenced and manually annotated full-length cDNAs. [My Copy] Nucleic Acids Res (12 August 2006) by Jun-Ichi I. Takeda, Yutaka Suzuki, Mitsuteru Nakao, et al.Roberto A A. Barrero, Kanako O O. Koyanagi, Lihua Jin, Chie Motono, Hiroko Hata, Takao Isogai, Keiichi Nagai, Tetsuji Otsuki, Vladimir Kuryshev, Masafumi Shionyu, Kei Yura, Mitiko Go, Jean Thierry-Mieg, Danielle Thierry-Mieg, Stefan Wiemann, Nobuo Nomura, Sumio Sugano, Takashi Gojobori, Tadashi Imanishi posted to alternative_splicing hinv by eoghanharr on 2006-08-21 14:00:26 as along with 2 people Cortel jfr
	The types and prevalence of alternative splice forms [My Copy] Current Opinion in Structural Biology In Nucleic acids/Sequences and topology - Anna Marie Pyle and Jonathan Widom/Nick V Grishin and Sarah A Teichmann, Vol. 16, No. 3. (June 2006), pp. 362-367. by Mihaela Zavolan, Erik van Nimwegen posted to alternative_splicing by eoghanharr on 2006-08-21 13:56:12 as
	Comparative analysis identifies exonic splicing regulatory sequences-the complex definition of enhancers and silencers. [My Copy] Mol Cell, Vol. 22, No. 6. (23 June 2006), pp. 769-781. by A. Goren, O. Ram, M. Amit, et al.H. Keren, G. Lev-Maor, I. Vig, T. Pupko, G. Ast posted to alternative_splicing motif regulation by eoghanharr on 2006-06-27 12:50:57 as along with 2 people and 2 groups dchughes smount G4ID Genetics-of-Gambling
	Alternative splicing and RNA selection pressure [mdash] evolutionary consequences for eukaryotic genomes [My Copy] Nat Rev Genet, Vol. 7, No. 7. (13 July 2006), pp. 499-509. by Yi Xing, Christopher Lee posted to alternative_splicing review by eoghanharr on 2006-06-18 12:48:17 as along with 5 people and 2 groups kongl inesdesantiago jwestbrook paulcartwright pradiptaray King_Lab BergmanLab
	Structure and evolution of neurexin genes: insight into the mechanism of alternative splicing. [My Copy] Genomics, Vol. 79, No. 6. (June 2002), pp. 849-859. by K. Tabuchi, T. C. Südhof posted to alternative_splicing review by eoghanharr on 2006-06-18 12:45:15 as along with 2 people and 1 group thegoose2 tharris C. elegans / WormBase
	Pre-messenger RNA processing and its regulation: a genomic perspective. [My Copy] Cell Mol Life Sci, Vol. 63, No. 7-8. (April 2006), pp. 796-819. by M. Soller posted to alternative_splicing review by eoghanharr on 2006-06-18 12:39:50 as
	An overview of insecticide resistance. [My Copy] Science, Vol. 298, No. 5591. (4 October 2002), pp. 96-97. by J. Hemingway, L. Field, J. Vontas posted to malaria resistance by eoghanharr on 2006-04-07 13:15:33 as
	The genomics of insecticide resistance. [My Copy] Genome Biol, Vol. 4, No. 1. (2003) by J. G. Oakeshott, I. Home, T. D. Sutherland, R. J. Russell posted to malaria resistance by eoghanharr on 2006-04-07 13:14:40 as
	Selecting for Functional Alternative Splices in ESTs [My Copy] Genome Res., Vol. 12, No. 12. (1 December 2002), pp. 1837-1845. by Zhengyan Kan, David States, Warren Gish posted to alternative_splicing evolution by eoghanharr on 2006-03-15 08:41:20 as
	Low conservation of alternative splicing patterns in the human and mouse genomes. [My Copy] Hum Mol Genet, Vol. 12, No. 11. (1 June 2003), pp. 1313-1320. by R. N. Nurtdinov, I. I. Artamonova, A. A. Mironov, M. S. Gelfand posted to alternative_splicing evolution by eoghanharr on 2006-03-15 08:30:31 as along with 1 person radek
	Identification and analysis of alternative splicing events conserved in human and mouse [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 102, No. 8. (22 February 2005), pp. 2850-2855. by Gene W. Yeo, Eric Van Nostrand, Dirk Holste, Tomaso Poggio, Christopher B. Burge posted to alternative_splicing evolution by eoghanharr on 2006-03-15 08:13:08 as along with 4 people and 1 group jonilaserson radek penka stajich Nie
	Species-specific variation of alternative splicing and transcriptional initiation in six eukaryotes. [My Copy] Gene, Vol. 364 (30 December 2005), pp. 53-62. by H. Nagasaki, M. Arita, T. Nishizawa, M. Suwa, O. Gotoh posted to no-tag by eoghanharr on 2006-03-14 17:29:01 as
	Evolutionarily conserved coupling of transcription and alternative splicing in the EPB41 (protein 4.1R) and EPB41L3 (protein 4.1B) genes. [My Copy] Genomics, Vol. 86, No. 6. (December 2005), pp. 701-707. by J. S. Tan, N. Mohandas, J. G. Conboy posted to no-tag by eoghanharr on 2006-03-14 17:27:35 as
	Evolution of exon-intron structure and alternative splicing in fruit flies and malarial mosquito genomes. [My Copy] Genome Res (6 March 2006) by Dmitry B B. Malko, Vsevolod J J. Makeev, Andrey A A. Mironov, Mikhail S S. Gelfand posted to alternative_splicing evolution insects by eoghanharr on 2006-03-09 08:03:46 as along with 4 people and 4 groups marcius indigoviolet penka stajich EisenLab Nie BioinfoCIPF SGU-CIPF
	Survey of Conserved Alternative Splicing Events of mRNAs Encoding SR Proteins in Land Plants. [My Copy] Mol Biol Evol (6 March 2006) by Kei Iida, Mitiko Go posted to alternative_splicing evolution plants by eoghanharr on 2006-03-08 15:53:40 as
	Patterns of intron gain and loss in fungi. [My Copy] PLoS Biol, Vol. 2, No. 12. (December 2004) by C. B. Nielsen, B. Friedman, B. Birren, C. B. Burge, J. E. Galagan posted to evolution intron by eoghanharr on 2006-02-27 13:13:35 as along with 3 people jwortman angieju seitentaisei
	A haplotype map of the human genome. [My Copy] Nature, Vol. 437, No. 7063. (27 October 2005), pp. 1299-1320. by International HapMap Consortium posted to haplotype by eoghanharr on 2006-02-27 08:33:46 as along with 15 people and 2 groups daforerog ilyashl noushin psique Cortel textoris pcahan1 cgasa tabu adepace djkt vplagnol ramensky jjannink jermth EisenLab PROPOSED_CGASA
	Evolution of alternative splicing: deletions, insertions and origin of functional parts of proteins from intron sequences. [My Copy] Trends Genet, Vol. 19, No. 3. (March 2003), pp. 115-119. by F. A. Kondrashov, E. V. Koonin posted to alternative_splicing evolution intron by eoghanharr on 2006-02-27 07:49:05 as along with 1 person balicea
	Remarkable interkingdom conservation of intron positions and massive, lineage-specific intron loss and gain in eukaryotic evolution. [My Copy] Curr Biol, Vol. 13, No. 17. (2 September 2003), pp. 1512-1517. by I. B. Rogozin, Y. I. Wolf, A. V. Sorokin, B. G. Mirkin, E. V. Koonin posted to evolution intron by eoghanharr on 2006-02-24 10:13:57 as along with 1 person and 1 group cmm FAB-lab
	The evolution of spliceosomal introns: patterns, puzzles and progress [My Copy] Nature Reviews Genetics, Vol. 7, No. 3., pp. 211-221. by Scott W. Roy, Walter Gilbert posted to alternative_splicing evolution intron by eoghanharr on 2006-02-20 10:20:53 as along with 4 people zhlei tabu stajich byy
	Quantitative microarray profiling provides evidence against widespread coupling of alternative splicing with nonsense-mediated mRNA decay to control gene expression [My Copy] Genes Dev., Vol. 20, No. 2. (15 January 2006), pp. 153-158. by Qun Pan, Arneet L. Saltzman, Yoon K. Kim, et al.Christine Misquitta, Ofer Shai, Lynne E. Maquat, Brendan J. Frey, Benjamin J. Blencowe posted to alternative_splicing microarray nmd by eoghanharr on 2006-02-06 16:14:42 as along with 3 people ccots tabu bertelsen
	Protein coding potential of retroviruses and other transposable elements in vertebrate genomes. [My Copy] Nucleic Acids Res, Vol. 33, No. 3. (2005), pp. 946-954. by E. M. Zdobnov, M. Campillos, E. D. Harrington, D. Torrents, P. Bork posted to evolution retro by eoghanharr on 2006-02-06 09:00:54 as
	The organization and evolution of the dipteran and hymenopteran Down syndrome cell adhesion molecule (Dscam) genes. [My Copy] RNA, Vol. 10, No. 10. (October 2004), pp. 1499-1506. by B. R. Graveley, A. Kaur, D. Gunning, S. L. Zipursky, L. Rowen, J. C. Clemens posted to as evolution by eoghanharr on 2005-03-10 16:52:14 as
	Dark matter in the genome: evidence of widespread transcription detected by microarray tiling experiments. [My Copy] Trends Genet, Vol. 21, No. 2. (February 2005), pp. 93-102. by J. M. Johnson, S. Edwards, D. Shoemaker, E. E. Schadt posted to array review tiling by eoghanharr on 2005-03-07 17:34:45 as along with 8 people and 2 groups inesdesantiago greg briann cassj imouthesmp xico adepace talponer EisenLab WetBiology

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alternative_splicing	18
evolution	14
metagenomics	5
intron	4
review	4
sargasso	3
as	2
genes	2
malaria	2
nmd	2
overlapping	2
regulation	2
resistance	2
array	1
community	1
disorder	1
factor	1
haplotype	1
hinv	1
insects	1
marine	1
mechanism	1
microarray	1
motif	1
neurexin	1
pathway	1
phylogenomics	1
plants	1
prediction	1
retro	1
sea	1
tiling	1
transcription	1

eoghanharr's library 40 articles Export

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