ethkim's library 106 articles Export

	Motorcycle Graphs: Canonical Quad Mesh Partitioning [My Copy] Computer Graphics Forum, Vol. 27, No. 5. (2008), pp. 1477-1486. by David Eppstein, Michael T. Goodrich, Ethan Kim, Rasmus Tamstorf posted to ethankim graph_theory by ethkim on 2009-06-16 23:18:33 as
	Significance analysis of spectral count data in label-free shotgun proteomics. [My Copy] Molecular & cellular proteomics : MCP (20 July 2008) by Hyungwon Choi, Damian Fermin, Alexey I I. Nesvizhskii posted to biostats ppi_network by ethkim on 2009-04-28 00:46:52 as along with 3 people mpitman brianb guhjy
	Mapping cis-regulatory domains in the human genome using multi-species conservation of synteny. [My Copy] Hum Mol Genet, Vol. 14, No. 20. (15 October 2005), pp. 3057-3063. by N. Ahituv, S. Prabhakar, F. Poulin, E. M. Rubin, O. Couronne posted to thesis by ethkim on 2009-02-13 21:31:20 as along with 2 people aprasad maximilianh
	Random Geometric Graphs (Oxford Studies in Probability) [My Copy] (03 July 2003) by Mathew Penrose posted to comp comprehensive by ethkim on 2008-08-18 08:21:21 as along with 2 people aleph gurkanbebek
	Modeling interactome: scale-free or geometric? [My Copy] Bioinformatics, Vol. 20, No. 18. (12 December 2004), pp. 3508-3515. by N. Przulj, D. G. Corneil, I. Jurisica posted to comp comprehensive by ethkim on 2008-08-18 08:19:11 as along with 7 people and 1 group abhishek_tiwari tomhebbron lfriedl wnpx j3xucite gurkanbebek maralena kdl
	Network Motifs: Simple Building Blocks of Complex Networks [My Copy] Science, Vol. 298, No. 5594. (25 October 2002), pp. 824-827. by R. Milo, S. Shen-Orr, S. Itzkovitz, N. Kashtan, D. Chklovskii, U. Alon posted to comp comprehensive by ethkim on 2008-08-18 08:06:07 as along with 72 people and 10 groups antonkratz jaspervoskuilen Sergey_gerbek nurban balabu ocs mjoach makrehchi schwartzjmc poirel tomhebbron arsyed vtraag sergiun fierykylin Akimasa operon dlobo daforerog chasmand wei_tang darian orahcio babakap brewbooks phoenixzxl Md_2007 mtagaya heliopais kaarsinogen galyardt cswinburne mullonc camster korakot aalibes ChaTo imouthesmp Borelli lfriedl alexg balicea tny ssb wnpx ddahlem cmm donade neveaire griota gurkanbebek jtaylor josepe iris_2001 michaelmampaey rebeccamancy karfunkel lenov Evangelia roys tfogal zibuyu maralena stefanoallesina pbull cmor renatomilani shikin carlk applesnow subhacom i-stevenson complex networks GEB Philosophy_of_Information dbk-lab Blog_and_Wiki_Research kdl FAB-lab ColDyn ADMiRes GeneGo
	Network motifs in the transcriptional regulation network of Escherichia coli. [My Copy] Nature genetics, Vol. 31, No. 1. (22 May 2002), pp. 64-68. by Shai S. Shen-Orr, Ron Milo, Shmoolik Mangan, Uri Alon posted to comp comprehensive by ethkim on 2008-08-18 07:45:38 as along with 19 people and 1 group antonkratz vtraag sergiun mtagaya kaarsinogen cswinburne jstajic jjray ssb nickluscombe gurkanbebek jtaylor jayster4 karfunkel blobbybirdman zibuyu maralena hannahrajasingh Borelli EBI-regulation
	Lethality and centrality in protein networks [My Copy] Nature, Vol. 411, No. 6833. (03 May 2001), pp. 41-42. by H. Jeong, S. P. Mason, A. L. Barabasi, Z. N. Oltvai posted to comp comprehensive by ethkim on 2008-08-18 07:34:02 as along with 24 people and 2 groups pablocarb feshbach mgomes lawraga deanmalmgren jmenche muraken davidecellai diamantis dylanwalker jiny kuhn cmmorel nickluscombe gurkanbebek jeremymiller timflutre ruvido gcalda grahamc lpfernandes Evangelia iris_2001 cerca EBI-regulation GeschwindLab
	Emergence of Scaling in Random Networks [My Copy] Science, Vol. 286, No. 5439. (15 October 1999), pp. 509-512. by Albert-László Barabási, Réka Albert posted to comp comprehensive by ethkim on 2008-08-18 05:39:09 as along with 51 people asangansi tonyony tessonec leonglester aniakovas nlimam acrmartins bivas makukha melo_mcr thepogoman vmarceau mfuhr tomhebbron eitanla1 voiklis jb44 kinop panisson anphony Adso mattjb phoenixzxl sWorgan czeller alanyang kaarsinogen diamantis pgastrein nolodie qwermish dragonrez shivaram tolosoft balicea ddahlem merazzle Borelli muraken lshaw gurkanbebek jaspervoskuilen rcrane ransombriggs idreams2 nkishan justforscraps Evangelia kb Diego_Prada subhacom
	Superparamagnetic Clustering of Data [My Copy] Physical Review Letters, Vol. 76, No. 18. (29 April 1996), 3251. by Marcelo Blatt, Shai Wiseman, Eytan Domany posted to comp comprehensive by ethkim on 2008-08-18 05:01:26 as along with 1 person hpaces
	Protein complex prediction via cost-based clustering [My Copy] Bioinformatics, Vol. 20, No. 17. (22 November 2004), pp. 3013-3020. by A. D. King, N. Przulj, I. Jurisica posted to comp comprehensive by ethkim on 2008-08-18 04:59:46 as along with 7 people and 1 group adking80 jiny lfriedl maralena hryk cerca carlk kdl
	Evaluation of clustering algorithms for protein-protein interaction networks [My Copy] BMC Bioinformatics, Vol. 7 (06 November 2006), 488. by Sylvain Brohee, Jacques van Helden posted to comp comprehensive by ethkim on 2008-08-18 04:46:41 as along with 16 people and 1 group kaarsinogen pdelosri jfr chad_davis balajis nirfriedman dquest grahamc cjeans hpaces Pao-Yang oktie carlk Borelli AbnerCYH cerca EPFL_SB_ITP_LBS
	Graph Clustering by Flow Simulation [My Copy] (2000) by S. M. van Dongen posted to comp comprehensive by ethkim on 2008-08-18 01:15:46 as
	CLICK: A Clustering Algorithm with Applications to Gene Expression Analysis [My Copy] (2000), pp. 307-316. by Roded Sharan, Ron Shamir posted to comp comprehensive by ethkim on 2008-08-18 00:47:51 as
	An Algorithm for Clustering cDNA Fingerprints [My Copy] Genomics, Vol. 66, No. 3. (15 June 2000), pp. 249-256. by Erez Hartuv, Armin O. Schmitt, Jorg Lange, Sebastian Meier-Ewert, Hans Lehrach, Ron Shamir posted to comp comprehensive by ethkim on 2008-08-18 00:47:32 as along with 1 person mmartin
	An automated method for finding molecular complexes in large protein interaction networks. [My Copy] BMC Bioinformatics, Vol. 4, No. 1. (13 January 2003) by G. D. Bader, C. W. Hogue posted to comp comprehensive by ethkim on 2008-08-17 23:59:23 as along with 10 people and 2 groups zufar dswan waqaralikeble cswinburne jiny dragonrez lfriedl nirfriedman massivemayhem carlk Bioinformatics kdl
	Functional organization of the yeast proteome by systematic analysis of protein complexes [My Copy] Nature, Vol. 415, No. 6868. (10 January 2002), pp. 141-147. by Anne-Claude Gavin, Markus Bosche, Roland Krause, et al.Paola Grandi, Martina Marzioch, Andreas Bauer, Jorg Schultz, Jens M. Rick, Anne-Marie Michon, Cristina-Maria Cruciat, Marita Remor, Christian Hofert, Malgorzata Schelder, Miro Brajenovic, Heinz Ruffner, Alejandro Merino, Karin Klein, Manuela Hudak, David Dickson, Tatjana Rudi, Volker Gnau, Angela Bauch, Sonja Bastuck, Bettina Huhse, Christina Leutwein, Marie-Anne Heurtier, Richard R. Copley, Angela Edelmann, Erich Querfurth, Vladimir Rybin, Gerard Drewes, Manfred Raida, Tewis Bouwmeester, Peer Bork, Bertrand Seraphin, Bernhard Kuster, Gitte Neubauer, Giulio Superti-Furga posted to comp comprehensive by ethkim on 2008-08-16 02:36:41 as along with 24 people and 2 groups aceol carlk chica lawraga semin cerca taenneken adiel baaden dragonrez shivaram helenc lfriedl chad_davis balajis opheliav wnpx becarmson raiyar grahamc nicoleq iris_2001 csanford frohike kdl steinmetzlab
	Comparative assessment of large-scale data sets of protein-protein interactions. [My Copy] Nature, Vol. 417, No. 6887. (23 May 2002), pp. 399-403. by Christian von Mering, Roland Krause, Berend Snel, et al.Michael Cornell, Stephen G. Oliver, Stanley Fields, Peer Bork posted to comp comprehensive by ethkim on 2008-08-15 03:58:14 as along with 25 people and 6 groups aceol nzm lawraga semin camster barry dragonrez bicko lfriedl chad_davis alexg j3xucite bundschu yeastyboy ruvido raiyar grahamc iris_2001 cmor shu Evangelia shikin Pao-Yang carlk cerca dbk-lab structural_bioinformatics kdl Bioinformatics generif_paper GeneGo
	Interaction generality, a measurement to assess the reliability of a protein-protein interaction [My Copy] Nucl. Acids Res., Vol. 30, No. 5. (1 March 2002), pp. 1163-1168. by Rintaro Saito, Harukazu Suzuki, Yoshihide Hayashizaki posted to comp comprehensive by ethkim on 2008-08-15 03:55:24 as along with 4 people and 1 group lfriedl bluto cjeans iris_2001 kdl
	Graph Theory Analysis of Protein-Protein Interactions [My Copy] In Knowledge Discovery in Proteomics (2005) by N. Przulj edited by Igor Jurisica, Dennis Wigle posted to comp by ethkim on 2008-08-13 19:17:42 as
	Computational approaches to predict protein-protein and domain-domain interactions [My Copy] In Bioinformatics Algorithms: Techniques and Applications (2008) by Raja Jothi, Teresa M. Przytycka edited by I. I. Mandoiu, A. Zelikovsky posted to comp by ethkim on 2008-08-13 19:10:26 as along with 1 person jperkins
	Deciphering Protein–Protein Interactions. Part I. Experimental Techniques and Databases [My Copy] PLoS Comput Biol, Vol. 3, No. 3. (30 March 2007), e42. by Benjamin A. Shoemaker, Anna R. Panchenko posted to comp by ethkim on 2008-08-13 19:06:26 as along with 12 people colmryan chica flbarroso kiekyon semin giovenko Yanno IbnBio zwang Evangelia carlk higueruelo
	Proteome survey reveals modularity of the yeast cell machinery [My Copy] Nature, Vol. 440, No. 7084. (22 January 2006), pp. 631-636. by Anne-Claude Gavin, Patrick Aloy, Paola Grandi, et al.Roland Krause, Markus Boesche, Martina Marzioch, Christina Rau, Lars J. Jensen, Sonja Bastuck, Birgit Dümpelfeld, Angela Edelmann, Marie-Anne Heurtier, Verena Hoffman, Christian Hoefert, Karin Klein, Manuela Hudak, Anne-Marie Michon, Malgorzata Schelder, Markus Schirle, Marita Remor, Tatjana Rudi, Sean Hooper, Andreas Bauer, Tewis Bouwmeester, Georg Casari, Gerard Drewes, Gitte Neubauer, Jens M. Rick, Bernhard Kuster, Peer Bork, Robert B. Russell, Giulio Superti-Furga posted to comp by ethkim on 2008-08-13 19:04:28 as along with 31 people and 10 groups aceol tomhebbron ajbattle mgomes Scis0000002 lawraga bicko saket Yanno ana Borelli lfriedl ccots jmeppley chad_davis balajis xico shantanu nirfriedman balabu dgront noano koller ruvido nicoleq lpfernandes phoenixzxl larsjuhljensen ellakat frohike carlk structural_bioinformatics kdl MathBio Biostatistics Bioinformatics microRNA Computational_Systems_Biology EvolutionaryComputation Computational-Neurobiology WetBiology
	Global landscape of protein complexes in the yeast Saccharomyces cerevisiae [My Copy] Nature, Vol. 440, No. 7084. (22 March 2006), pp. 637-643. by Nevan J. Krogan, Gerard Cagney, Haiyuan Yu, et al.Gouqing Zhong, Xinghua Guo, Alexandr Ignatchenko, Joyce Li, Shuye Pu, Nira Datta, Aaron P. Tikuisis, Thanuja Punna, Josã© M. Peregrãn-Alvarez, Michael Shales, Xin Zhang, Michael Davey, Mark D. Robinson, Alberto Paccanaro, James E. Bray, Anthony Sheung, Bryan Beattie, Dawn P. Richards, Veronica Canadien, Atanas Lalev, Frank Mena, Peter Wong, Andrei Starostine, Myra M. Canete, James Vlasblom, Samuel Wu, Chris Orsi, Sean R. Collins, Shamanta Chandran, Robin Haw, Jennifer J. Rilstone, Kiran Gandi, Natalie J. Thompson, Gabe Musso, Peter St Onge, Shaun Ghanny, Mandy H. Y. Lam, Gareth Butland, Amin M. Altaf-Ul, Shigehiko Kanaya, Ali Shilatifard, Erin O'Shea, Jonathan S. Weissman, James C. Ingles, Timothy R. Hughes, John Parkinson, Mark Gerstein, Shoshana J. Wodak, Andrew Emili, Jack F. Greenblatt posted to comp by ethkim on 2008-08-13 19:03:59 as along with 30 people and 5 groups aceol mpotamias paccanarolab ajbattle mgomes jxl bicko cerca jiny Borelli lfriedl chad_davis balajis marcius tardigrade nirfriedman balabu j3xucite nickluscombe koller raiyar cjeans nicoleq Evangelia csaveanu frohike carlk hplatero chasmand mapplab Paccanaro Lab kdl EBI-regulation BioinfoCIPF SGU-CIPF
	Protein-protein Interactions and Networks: Identification, Computer Analysis, and Prediction [My Copy] (18 July 2008) posted to comprehensive phd ppi_network by ethkim on 2008-06-29 04:24:54 as
	Approximation Algorithms [My Copy] (22 March 2004) by Vijay V. Vazirani posted to comp comprehensive phd ppi_network by ethkim on 2008-06-25 21:39:14 as along with 3 people citeUlike123 NeilInCanadia rocarvaj
	Implementing a fully polynomial time approximation scheme for all terminal network reliability [My Copy] In SODA '97: Proceedings of the eighth annual ACM-SIAM symposium on Discrete algorithms (1997), pp. 334-343. by David R. Karger, Ray P. Tai posted to comp comprehensive phd ppi_network by ethkim on 2008-06-25 21:02:27 as along with 1 person dominik
	A Randomized Fully Polynomial Time Approximation Scheme for the All-Terminal Network Reliability Problem [My Copy] SIAM Review, Vol. 43, No. 3. (2001), pp. 499-522. by David R. Karger posted to comp comprehensive phd ppi_network by ethkim on 2008-06-25 21:01:02 as
	The Complexity of Counting Cuts and of Computing the Probability that a Graph is Connected [My Copy] SIAM Journal on Computing, Vol. 12, No. 4. (1983), pp. 777-788. by Scott J. Provan, Michael O. Ball posted to comprehensive phd ppi_network by ethkim on 2008-06-25 20:46:09 as along with 1 person ajf5570
	The Complexity of Enumeration and Reliability Problems [My Copy] SIAM Journal on Computing, Vol. 8, No. 3. (1979), pp. 410-421. by Leslie G. Valiant posted to comp comprehensive phd ppi_network by ethkim on 2008-06-25 20:42:10 as along with 2 people jorgeac mpotamias
	A Topological Measurement for Weighted Protein Interaction Network [My Copy] In CSB '05: Proceedings of the 2005 IEEE Computational Systems Bioinformatics Conference (CSB'05) (2005), pp. 268-278. by Pengjun Pei, Aidong Zhang posted to comp comprehensive phd ppi_network by ethkim on 2008-06-25 20:38:35 as along with 1 person iris_2001
	Construction of reliable protein-protein interaction networks with a new interaction generality measure. [My Copy] Bioinformatics, Vol. 19, No. 6. (12 April 2003), pp. 756-763. by R. Saito, H. Suzuki, Y. Hayashizaki posted to comp comprehensive phd ppi_network by ethkim on 2008-06-25 20:36:50 as along with 3 people anf bluto cerca
	Increasing confidence of protein interactomes using network topological metrics. [My Copy] Bioinformatics, Vol. 22, No. 16. (15 August 2006), pp. 1998-2004. by J. Chen, W. Hsu, M. L. Lee, S. K. Ng posted to comp comprehensive phd ppi_network by ethkim on 2008-06-25 20:34:47 as along with 1 person bluto
	Systematic Assessment of High-Throughput Experimental Data for Reliable Protein Interactions Using Network Topology [My Copy] In ICTAI '04: Proceedings of the 16th IEEE International Conference on Tools with Artificial Intelligence (2004), pp. 368-372. by Jin Chen, Wynne Hsu, Mong L. Lee, See-Kiong Ng posted to comp comprehensive phd ppi_network by ethkim on 2008-06-25 20:32:41 as
	Fast Triangulation of Simple Polygons [My Copy] In Proceedings of the 1983 International FCT-Conference on Fundamentals of Computation Theory (1983), pp. 207-218. by S. Hertel, K. Mehlhorn posted to wsn by ethkim on 2007-12-13 00:02:42 as
	Decomposing a polygon into simpler components [My Copy] SIAM Journal on Computing, Vol. 14 (1985), pp. 799-817. by J. M. Keil posted to wsn by ethkim on 2007-12-12 23:33:52 as
	The decomposition of polygons into convex parts [My Copy] Computational Geometry, Advances in Computing Research, Vol. 1 (1983), pp. 235-259. by D. H. Greene edited by F. P. Preparata posted to wsn by ethkim on 2007-12-12 23:32:22 as
	Triangulating a simple polygon in linear time [My Copy] Discrete Comput. Geom., Vol. 6, No. 5. (1991), pp. 485-524. by B. Chazelle posted to wsn by ethkim on 2007-12-12 23:28:48 as
	Guarding lines and 2-link polygons is APX-hard [My Copy] (2001) by B. Broden, M. Hammar, B. Nilsson posted to wsn by ethkim on 2007-12-12 23:27:15 as
	Inapproximability Results for Guarding Polygons and Terrains [My Copy] Algorithmica, Vol. 31, No. 1. (2001), pp. 79-113. by S. Eidenbenz, C. Stamm, P. Widmayer posted to wsn by ethkim on 2007-12-12 23:26:15 as
	Covering polygons is hard [My Copy] J. Algorithms, Vol. 17, No. 1. (July 1994), pp. 2-44. by J. Culberson, R. Reckhow posted to wsn by ethkim on 2007-12-12 23:24:43 as
	Computational complexity of art gallery problems [My Copy] IEEE Trans. Inf. Theor., Vol. 32, No. 2. (March 1986), pp. 276-282. by D. T. Lee, A. K. Lin posted to wsn by ethkim on 2007-12-12 23:23:46 as
	A short proof of chvatal's watchman theorem [My Copy] Journal of Combinatorial Theory Series B, Vol. 24 (1978), 374. by S. Fisk posted to wsn by ethkim on 2007-12-12 23:08:10 as
	A combinatorial theorem in plane geometry [My Copy] Journal of Combinatorial Theory Series B, Vol. 18 (1975), pp. 39-41. by V. Chvatal posted to wsn by ethkim on 2007-12-12 23:06:27 as
	Mathematical Gems II [My Copy] (1976) by R. Honsberger posted to wsn by ethkim on 2007-12-12 23:03:08 as
	Maintaining Sensing Coverage and Connectivity in Large Sensor Networks [My Copy] Ad Hoc & Sensor Wireless Networks, Vol. 1, No. 1-2. (2005) by H. Zhang, J. Hou posted to wsn by ethkim on 2007-12-12 22:59:58 as along with 1 person yang_peng
	Coverage problems in wireless ad-hoc sensor networks [My Copy] INFOCOM 2001. Twentieth Annual Joint Conference of the IEEE Computer and Communications Societies. Proceedings. IEEE, Vol. 3 (2001), pp. 1380-1387 vol.3. by S. Meguerdichian, F. Koushanfar, M. Potkonjak, M. B. Srivastava posted to wsn by ethkim on 2007-12-12 22:55:45 as along with 3 people and 1 group Harold324 samo83 hyhu84 ad hoc localization
	Linear-Time Algorithms for Linear Programming in $R^3 $ and Related Problems [My Copy] SIAM Journal on Computing, Vol. 12, No. 4. (1983), pp. 759-776. by N. Megiddo posted to wsn by ethkim on 2007-12-12 22:55:17 as along with 1 person nachovall
	A New Model for 3-D Cellular Mobile Networks [My Copy] In ISPDC '04: Proceedings of the Third International Symposium on Parallel and Distributed Computing/Third International Workshop on Algorithms, Models and Tools for Parallel Computing on Heterogeneous Networks (ISPDC/HeteroPar'04) (2004), pp. 22-28. by C. Decayeux, D. Seme posted to wsn by ethkim on 2007-12-12 22:54:03 as
	Sensor deployment strategy for target detection [My Copy] In WSNA '02: Proceedings of the 1st ACM international workshop on Wireless sensor networks and applications (2002), pp. 42-48. by T. Clouqueur, V. Phipatanasuphorn, P. Ramanathan, K. Saluja posted to wsn by ethkim on 2007-12-12 22:53:35 as along with 1 person Harold324

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ethkim's library 106 articles Export

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