farzanehs's ppi [16 articles] Export Sort

Recent papers added to farzanehs's library classified by the tag ppi. You can also see everyone's ppi.

Hide details

	A realistic assessment of methods for extracting gene/protein interactions from free text. [My Copy] BMC bioinformatics, Vol. 10, No. 1. (28 July 2009), 233. by Renata Kabiljo, Andrew B. Clegg, Adrian J. Shepherd posted to ppi by farzanehs on 2009-08-20 10:24:53 as along with 12 people and 4 groups babaluma henk-cul martingerner DTD102 satre grahamc mitko sjcockell sillitoe andrewclegg cisevol barriot dbmi-nlp Journal picks Orengo Group Journal Picks BergmanLab
	BioContrasts: extracting and exploiting protein-protein contrastive relations from biomedical literature [My Copy] Bioinformatics, Vol. 22, No. 5. (1 March 2006), pp. 597-605. by Jung-jae Kim, Zhuo Zhang, Jong C. Park, See-Kiong Ng posted to contradiction contrasts ppi by farzanehs on 2009-01-05 11:06:43 as along with 1 person bsamal
	Computer-Assisted Generation of a Protein-Interaction Database for Nuclear Receptors [My Copy] Mol Endocrinol, Vol. 17, No. 8. (1 August 2003), pp. 1555-1567. by Sylvie Albert, Sylvain Gaudan, Heidrun Knigge, et al.Andreas Raetsch, Asuncion Delgado, Bettina Huhse, Harald Kirsch, Michael Albers, Dietrich Rebholz-Schuhmann, Manfred Koegl posted to ppi by farzanehs on 2009-01-01 01:06:09 as
	Integrating Co-occurrence Statistics with Information Extraction for Robust Retrieval of Protein Interactions from Medline [My Copy] In Proceedings of the BioNLP Workshop on Linking Natural Language Processing and Biology at HLT-NAACL 06 (June 2006), pp. 49-56. by Razvan Bunescu, Raymond Mooney, Arun Ramani, Edward Marcotte posted to ppi statistics survey by farzanehs on 2008-12-27 13:12:44 as
	Overview of the protein-protein interaction annotation extraction task of BioCreative II [My Copy] Genome Biology, Vol. 9, No. Suppl 2. (2008), S4. by Martin Krallinger, Florian Leitner, Carlos R. Penagos, Alfonso Valencia posted to biocreative ppi by farzanehs on 2008-12-07 17:46:48 as along with 2 people and 1 group satre Effie NaCTeM
	Human immunodeficiency virus type 1, human protein interaction database at NCBI [My Copy] Nucl. Acids Res. (15 October 2008), gkn708. by William Fu, Brigitte E. Sanders-Beer, Kenneth S. Katz, Donna R. Maglott, Kim D. Pruitt, Roger G. Ptak posted to hiv ncbi ppi by farzanehs on 2008-10-29 23:47:00 as along with 1 person grahamc
	Negation of protein protein interactions: analysis and extraction [My Copy] Bioinformatics, Vol. 23, No. 13. (1 July 2007), pp. i424-432. by Olivia Sanchez-Graillet, Massimo Poesio posted to negation ppi by farzanehs on 2008-10-19 14:34:25 as along with 1 person iris_2001
	BioInfer: a corpus for information extraction in the biomedical domain [My Copy] BMC Bioinformatics, Vol. 8, No. 1. (2007), 50. by Sampo Pyysalo, Filip Ginter, Juho Heimonen, et al.Jari Bjorne, Jorma Boberg, Jouni Jarvinen, Tapio Salakoski posted to bioinfer bioinformatics biomedicine bionlp corpus nlp ppi relation by farzanehs on 2008-09-28 14:08:06 as along with 11 people and 1 group kgrothoff satre arafalov sacebro yas lynnefox bhaddow johnkork balex kemo mircea T_lab
	Why Biomedical Relation Extraction Results are Incomparable and What to do about it [My Copy] In SMBM'08 (2008) by Sampo Pyysalo, Rune Sætre, Jun’ichi Tsujii, Tapio Salakoski posted to biomedicine evaluation ppi relation_extraction by farzanehs on 2008-09-25 14:48:16 as
	Integrating protein-protein interactions and text mining for protein function prediction [My Copy] BMC Bioinformatics, Vol. 9, No. Suppl 8. (2008) by Samira Jaeger, Sylvain Gaudan, Ulf Leser, Dietrich R. Schuhmann posted to ppi prediction protein_function_prediction text_mining by farzanehs on 2008-09-25 12:44:04 as along with 7 people and 1 group Effie raiyar jiny bootsy reyez phoenixzxl guhjy NaCTeM
	RelEx--Relation extraction using dependency parse trees [My Copy] Bioinformatics, Vol. 23, No. 3. (1 February 2007), pp. 365-371. by Katrin Fundel, Robert Kuffner, Ralf Zimmer posted to ppi relation_extraction relex by farzanehs on 2008-09-15 22:32:15 as along with 11 people babaluma eesruiz pault henk-cul ogenex johnkork bhaddow vlachmore TheresaNiederberger satre gilesc
	Comparative analysis of five protein-protein interaction corpora [My Copy] BMC Bioinformatics, Vol. 9, No. Suppl 3. (2008), S6. by Sampo Pyysalo, Antti Airola, Juho Heimonen, Jari Bjorne, Filip Ginter, Tapio Salakoski posted to ppi by farzanehs on 2008-09-15 18:04:32 as along with 10 people and 3 groups martingerner satre pault guhjy laughcry kluck vlachmore aprildh31 anthropomorphism gilesc NaCTeM BioInfPDL Proteasome
	A Graph Kernel for Protein-Protein Interaction Extraction [My Copy] In BioNLP (2008) by Antti Airola, Sampo Pyysalo, Jari Björne, Tapio Pahikkala, Filip Ginter, Tapio Salakoski posted to machine_learning ppi by farzanehs on 2008-09-12 13:06:45 as along with 1 person vlachmore
	Extracting Protein-Protein Interaction Information from Biomedical Text with SVM [My Copy] IEICE - Trans. Inf. Syst., Vol. E89-D, No. 8. (2006), pp. 2464-2466. by Tomohiro Mitsumori, Masaki Murata, Yasushi Fukuda, Kouichi Doi, Hirohumi Doi posted to ppi svm by farzanehs on 2008-08-28 13:59:56 as along with 2 people and 1 group henk-cul satre dbmi-nlp
	Learning anchor verbs for biological interaction patterns from published text articles [My Copy] International Journal of Medical Informatics (December 2002), pp. 19-32. by V. Hatzivassiloglou, W. Weng posted to interaction_verbs ppi by farzanehs on 2008-04-25 17:59:26 as
	Text mining applied to biological texts: beyond the extraction of protein-protein interactions [My Copy] (2007) by Olivia Sanchez posted to anaphora contradiction negation olivia ppi by farzanehs on 2008-04-09 16:57:09 as

Note: You may cite this page as: http://www.citeulike.org/user/farzanehs/tag/ppi

Sort by:
Order:	Default Ascending Descending
Empty fields:	Default First Last

smbm2008	30
ppi	16
negation	14
text_mining	11
survey	10
temporal	8
contradiction	6
biomedicine	5
biocreative	5
svm	4
relation_extraction	3
ner	3
bionlp	3
negex	3
corpus	2
hiv	2
briefings	2
statistics	2
literature	2
nlp	2
bioinformatics	2
scope	2
biology	2
standard	2
contrast	2
timeml	1
automatic_term_recognition	1
foundations	1
punctuation	1
command_relations	1
standardisation	1
normalization	1
survery	1
conflict	1
virtual	1
variant	1
ncbi	1
nominalization	1
trembl	1
annotated	1
bioinfer	1
classic	1
ambiguity	1
string_distance	1
synonym	1
measure	1
contrasts	1
modular	1
deverbal_nouns	1
identification	1
algorithm	1
clinical_report	1
protein_function_prediction	1
nei	1
definition	1
golden	1
information_extraction	1
relation	1
nltk	1
neighbourhood	1
argumentation	1
file-import-08-10-19	1
geniatagger	1
metric	1
irony	1
report	1
interaction_verbs	1
machine_learning	1
clinical	1
swiss-prot	1
service	1
medical	1
speculation	1
crf	1
frequency	1
linguistics	1
olivia	1
prediction	1
logic	1
automatic_marking	1
anaphora	1
summarizing	1
xml	1
ontology	1
evaluation	1
iexml	1
distance	1
n-gram	1
timex	1
review	1
relex	1
protein	1
module	1
uncertainty	1
atr	1
news-wire	1
matching	1
spelling	1

farzanehs's ppi [16 articles] Export Sort

farzanehs's tags