fenghezi's library 266 articles Export

	MBD-isolated Genome Sequencing provides a high-throughput and comprehensive survey of DNA methylation in the human genome [My Copy] Nucl. Acids Res. (11 November 2009), gkp992. by David Serre, Byron H. Lee, Angela H. Ting posted to technology mecg by fenghezi on 2009-11-18 22:46:21 as
	Combinatorial binding predicts spatio-temporal cis-regulatory activity [My Copy] Nature, Vol. 462, No. 7269. (05 November 2009), pp. 65-70. by Robert P. Zinzen, Charles Girardot, Julien Gagneur, Martina Braun, Eileen E. M. Furlong posted to network motif integration by fenghezi on 2009-11-06 19:58:32 as along with 10 people emptyhb toszko roys inesdesantiago balabu iskathy djkt megraw TRHvidsten pedrobeltrao
	An oestrogen-receptor-alpha-bound human chromatin interactome. [My Copy] Nature, Vol. 462, No. 7269. (5 November 2009), pp. 58-64. by Melissa J. Fullwood, Mei Hui H. Liu, You Fu F. Pan, et al.Jun Liu, Han Xu, Yusoff Bin B. Mohamed, Yuriy L. Orlov, Stoyan Velkov, Andrea Ho, Poh Huay H. Mei, Elaine G. Chew, Phillips Yao Hui Y. Huang, Willem-Jan J. Welboren, Yuyuan Han, Hong Sain S. Ooi, Pramila N. Ariyaratne, Vinsensius B. Vega, Yanquan Luo, Peck Yean Y. Tan, Pei Ye Y. Choy, Senali Abayratna D. Wansa, Bing Zhao, Kar Sian S. Lim, Shi Chi C. Leow, Jit Sin S. Yow, Roy Joseph, Haixia Li, Kartiki V. Desai, Jane S. Thomsen, Yew Kok K. Lee, R. Krishna Murthy Karuturi, Thoreau Herve, Guillaume Bourque, Hendrik G. Stunnenberg, Xiaoan Ruan, Valere Cacheux-Rataboul, Wing-Kin K. Sung, Edison T. Liu, Chia-Lin L. Wei, Edwin Cheung, Yijun Ruan posted to technology chipseq by fenghezi on 2009-11-06 19:48:00 as along with 4 people chvlyl mkiyer gdb TRHvidsten
	Global patterns of cis variation in human cells revealed by high-density allelic expression analysis [My Copy] Nature Genetics, Vol. 41, No. 11. (18 October 2009), pp. 1216-1222. by Bing Ge, Dmitry K. Pokholok, Tony Kwan, et al.Elin Grundberg, Lisanne Morcos, Dominique J. Verlaan, Jennie Le, Vonda Koka, Kevin C. L. Lam, Vincent Gagne, Joana Dias, Rose Hoberman, Alexandre Montpetit, Marie-Michele Joly, Edward J. Harvey, Daniel Sinnett, Patrick Beaulieu, Robert Hamon, Alexandru Graziani, Ken Dewar, Eef Harmsen, Jacek Majewski, Harald H. H. Goring, Anna K. Naumova, Mathieu Blanchette, Kevin L. Gunderson, Tomi Pastinen posted to variation geneexp by fenghezi on 2009-11-02 16:56:47 as along with 10 people and 1 group bpcusack songpku gderwin djkt qayub dill2009 zufar psique daforerog vplagnol Journal picks
	DNA methylation protects hematopoietic stem cell multipotency from myeloerythroid restriction [My Copy] Nature Genetics, Vol. 41, No. 11. (04 October 2009), pp. 1207-1215. by Ann-Marie Broske, Lena Vockentanz, Shabnam Kharazi, et al.Matthew R. Huska, Elena Mancini, Marina Scheller, Christiane Kuhl, Andreas Enns, Marco Prinz, Rudolf Jaenisch, Claus Nerlov, Achim Leutz, Miguel A. Andrade-Navarro, Sten E. Jacobsen, Frank Rosenbauer posted to mecg development by fenghezi on 2009-11-02 16:55:05 as
	26G endo-siRNAs regulate spermatogenic and zygotic gene expression in Caenorhabditis elegans [My Copy] Proceedings of the National Academy of Sciences, Vol. 106, No. 44. (3 November 2009), pp. 18674-18679. by Ting Han, Arun P. Manoharan, Tim T. Harkins, et al.Pascal Bouffard, Colin Fitzpatrick, Diana S. Chu, Danielle Thierry-Mieg, Jean Thierry-Mieg, John K. Kim posted to smallrna development by fenghezi on 2009-11-02 16:43:07 as
	Unexpected consequences of a sudden and massive transposon amplification on rice gene expression [My Copy] Nature, Vol. 461, No. 7267. (22 October 2009), pp. 1130-1134. by Ken Naito, Feng Zhang, Takuji Tsukiyama, et al.Hiroki Saito, C. Nathan Hancock, Aaron O. Richardson, Yutaka Okumoto, Takatoshi Tanisaka, Susan R. Wessler posted to plant evo by fenghezi on 2009-10-26 16:39:03 as along with 3 people operon bpcusack djkt
	Molecular interactions between HNF4a, FOXA2 and GABP identified at regulatory DNA elements through ChIP-sequencing [My Copy] Nucl. Acids Res. (12 October 2009), gkp823. by Ola Wallerman, Mehdi Motallebipour, Stefan Enroth, et al.Kalicharan Patra, Madhu S. Bysani, Jan Komorowski, Claes Wadelius posted to chipseq by fenghezi on 2009-10-19 19:22:47 as
	Genomic determination of the glucocorticoid response reveals unexpected mechanisms of gene regulation [My Copy] Genome Research (2 October 2009) by Timothy E. Reddy, Florencia Pauli, Rebekka O. Sprouse, et al.Norma F. Neff, Kimberly M. Newberry, Michael J. Garabedian, Richard M. Myers posted to geneexp chipseq by fenghezi on 2009-10-19 17:29:04 as
	Human DNA methylomes at base resolution show widespread epigenomic differences [My Copy] Nature, Vol. 462, No. 7271. (14 October 2009), pp. 315-322. by Ryan Lister, Mattia Pelizzola, Robert H. Dowen, et al.R. David Hawkins, Gary Hon, Julian Tonti-Filippini, Joseph R. Nery, Leonard Lee, Zhen Ye, Que-Minh Ngo, Lee Edsall, Jessica Antosiewicz-Bourget, Ron Stewart, Victor Ruotti, A. Harvey Millar, James A. Thomson, Bing Ren, Joseph R. Ecker posted to smallrna mecg chip-seq by fenghezi on 2009-10-15 20:48:18 as along with 22 people and 4 groups jessopher malay gdb qayub greg neils megraw mamitamura tonamswish rsaito clearbluespring rschulz RyuOgawa hagechouchin443 devinmhellesen daveGerrard polivares dswan colinveal frohike liqbbi ethanmj JLab CTCF BergmanLab Journal picks
	The Argonaute CSR-1 and Its 22G-RNA Cofactors Are Required for Holocentric Chromosome Segregation [My Copy] Cell, Vol. 139, No. 1. (02 October 2009), pp. 123-134. by Julie M. Claycomb, Pedro J. Batista, Ka M. Pang, et al.Weifeng Gu, Jessica J. Vasale, Josien C. van Wolfswinkel, Daniel A. Chaves, Masaki Shirayama, Shohei Mitani, René F. Ketting posted to smallrna replication by fenghezi on 2009-10-14 22:56:09 as along with 1 person gbloeb
	BreakDancer: an algorithm for high-resolution mapping of genomic structural variation [My Copy] Nature Methods, Vol. 6, No. 9. (09 August 2009), pp. 677-681. by Ken Chen, John W. Wallis, Michael D. McLellan, et al.David E. Larson, Joelle M. Kalicki, Craig S. Pohl, Sean D. McGrath, Michael C. Wendl, Qunyuan Zhang, Devin P. Locke, Xiaoqi Shi, Robert S. Fulton, Timothy J. Ley, Richard K. Wilson, Li Ding, Elaine R. Mardis posted to variation technology genome_sequencing by fenghezi on 2009-10-14 20:39:27 as along with 12 people and 1 group Leaflet heliopais stubrown dakelley daed natstreet druvus sitalange qayub gdb jasontsai danmaclean Journal picks
	A Transcriptome Database for Astrocytes, Neurons, and Oligodendrocytes: A New Resource for Understanding Brain Development and Function [My Copy] J. Neurosci., Vol. 28, No. 1. (2 January 2008), pp. 264-278. by John D. Cahoy, Ben Emery, Amit Kaushal, et al.Lynette C. Foo, Jennifer L. Zamanian, Karen S. Christopherson, Yi Xing, Jane L. Lubischer, Paul A. Krieg, Sergey A. Krupenko, Wesley J. Thompson, Ben A. Barres posted to neurodev geneexp by fenghezi on 2009-10-13 22:58:38 as along with 2 people hplatero jeremymiller
	Comprehensive Mapping of Long-Range Interactions Reveals Folding Principles of the Human Genome [My Copy] Science, Vol. 326, No. 5950. (9 October 2009), pp. 289-293. by Erez Lieberman-Aiden, Nynke L. van Berkum, Louise Williams, et al.Maxim Imakaev, Tobias Ragoczy, Agnes Telling, Ido Amit, Bryan R. Lajoie, Peter J. Sabo, Michael O. Dorschner, Richard Sandstrom, Bradley Bernstein, M. A. Bender, Mark Groudine, Andreas Gnirke, John Stamatoyannopoulos, Leonid A. Mirny, Eric S. Lander, Job Dekker posted to technology genome_sequencing by fenghezi on 2009-10-09 20:54:14 as along with 31 people and 3 groups pmcarlton alhufton psique qayub chvlyl TorstenWaldminghaus kintoki Garamonfok inesdesantiago NickFurnham DrRichardBadge roys rdiaz daveGerrard colinveal frohike nrk891 zwang timflutre afenley kshameer polivares mgatmedsci diamantis flbarroso jdoconnell daforerog bpcusack gjuggler gdb gbloeb JLab BergmanLab Journal picks
	A genome-wide linkage and association scan reveals novel loci for autism. [My Copy] Nature, Vol. 461, No. 7265. (8 October 2009), pp. 802-808. by Lauren A. Weiss, Dan E. Arking, Gene Discovery Project of Johns Hopkins & the Autism Consortium, Mark J. Daly, Aravinda Chakravarti posted to diseasegenes autism by fenghezi on 2009-10-08 21:46:52 as along with 4 people and 1 group wangngu ns6 Terkko daforerog Journal picks
	Finding the missing heritability of complex diseases. [My Copy] Nature, Vol. 461, No. 7265. (8 October 2009), pp. 747-753. by Teri A. Manolio, Francis S. Collins, Nancy J. Cox, et al.David B. Goldstein, Lucia A. Hindorff, David J. Hunter, Mark I. McCarthy, Erin M. Ramos, Lon R. Cardon, Aravinda Chakravarti, Judy H. Cho, Alan E. Guttmacher, Augustine Kong, Leonid Kruglyak, Elaine Mardis, Charles N. Rotimi, Montgomery Slatkin, David Valle, Alice S. Whittemore, Michael Boehnke, Andrew G. Clark, Evan E. Eichler, Greg Gibson, Jonathan L. Haines, Trudy F. Mackay, Steven A. McCarroll, Peter M. Visscher posted to diseasegenes by fenghezi on 2009-10-08 21:44:33 as along with 16 people and 1 group virolog timflutre daveGerrard leemachado lp2 natstreet ns6 balajis jclau liqbbi josepe daforerog rdiaz carolep merpublic djkt Journal picks
	A highly annotated whole-genome sequence of a Korean individual [My Copy] Nature, Vol. advance online publication, No. 7258. (08 July 2009), pp. 1011-1015. by Jong-Il Kim, Young S. Ju, Hansoo Park, et al.Sheehyun Kim, Seonwook Lee, Jae-Hyuk Yi, Joann Mudge, Neil A. Miller, Dongwan Hong, Callum J. Bell, Hye-Sun Kim, In-Soon Chung, Woo-Chung Lee, Ji-Sun Lee, Seung-Hyun Seo, Ji-Young Yun, Hyun N. Woo, Heewook Lee, Dongwhan Suh, Seungbok Lee, Hyun-Jin Kim, Maryam Yavartanoo, Minhye Kwak, Ying Zheng, Mi K. Lee, Hyunjun Park, Jeong Y. Kim, Omer Gokcumen, Ryan E. Mills, Alexander W. Zaranek, Joseph Thakuria, Xiaodi Wu, Ryan W. Kim, Jim J. Huntley, Shujun Luo, Gary P. Schroth, Thomas D. Wu, HyeRan Kim, Kap-Seok Yang, Woong-Yang Park, Hyungtae Kim, George M. Church, Charles Lee, Stephen F. Kingsmore, Jeong-Sun Seo posted to variation genome_sequencing by fenghezi on 2009-10-05 21:35:34 as along with 8 people and 1 group n00c nicolesoranzo mtagaya reyez pkonings psique djkt jbhiatt Journal picks
	Specific pathways prevent duplication-mediated genome rearrangements [My Copy] Nature, Vol. 460, No. 7258. (29 July 2009), pp. 984-989. by Christopher D. Putnam, Tikvah K. Hayes, Richard D. Kolodner posted to duplication by fenghezi on 2009-10-05 21:34:32 as along with 5 people and 3 groups polivares rdiaz stajich jbhiatt biomcgary BergmanLab Journal picks Mycology
	Cooperative binding of two acetylation marks on a histone tail by a single bromodomain [My Copy] Nature, Vol. 461, No. 7264. (01 October 2009), pp. 664-668. by Jeanne Moriniere, Sophie Rousseaux, Ulrich Steuerwald, et al.Montserrat Soler-Lopez, Sandrine Curtet, Anne-Laure Vitte, Jerome Govin, Jonathan Gaucher, Karin Sadoul, Darren J. Hart, Jeroen Krijgsveld, Saadi Khochbin, Christoph W. Muller, Carlo Petosa posted to histonemodification by fenghezi on 2009-10-05 21:25:27 as along with 1 person vingron
	Robust discrimination between self and non-self neurites requires thousands of Dscam1 isoforms [My Copy] Nature, Vol. 461, No. 7264. (01 October 2009), pp. 644-648. by Daisuke Hattori, Yi Chen, Benjamin J. Matthews, et al.Lukasz Salwinski, Chiara Sabatti, Wesley B. Grueber, S. Lawrence Zipursky posted to as by fenghezi on 2009-10-05 21:23:10 as along with 1 person biomcgary
	Recent de novo origin of human protein-coding genes. [My Copy] Genome research, Vol. 19, No. 10. (2 October 2009), pp. 1752-1759. by David G. Knowles, Aoife McLysaght posted to evo by fenghezi on 2009-10-05 21:13:32 as along with 9 people and 2 groups rshe psique xianjun gjuggler biomcgary megraw avilella bpcusack djkt Journal picks Ensembl Compara citations
	Uncovering Early Response of Gene Regulatory Networks in ESCs by Systematic Induction of Transcription Factors [My Copy] Cell Stem Cell, Vol. 5, No. 4. (02 October 2009), pp. 420-433. by Akira Nishiyama, Li Xin, Alexei A. Sharov, et al.Marshall Thomas, Gregory Mowrer, Emily Meyers, Yulan Piao, Samir Mehta, Sarah Yee, Yuhki Nakatake posted to geneexp development chipseq by fenghezi on 2009-10-05 18:52:39 as
	BayesPeak: Bayesian analysis of ChIP-seq data [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (2009), 299. by Christiana Spyrou, Rory Stark, Andy Lynch, Simon Tavare posted to technology chipseq by fenghezi on 2009-10-05 18:37:49 as along with 11 people and 4 groups Vincent_Rouilly tonamswish dswan inesdesantiago idonaldson polivares mkiyer druvus stajich humburg rschulz Bioinformatics JLab BergmanLab Mycology
	Ago2 Immunoprecipitation Identifies Predicted MicroRNAs in Human Embryonic Stem Cells and Neural Precursors [My Copy] PLoS ONE, Vol. 4, No. 9. (28 September 2009), e7192. by Loyal A. Goff, Jonathan Davila, Mavis R. Swerdel, et al.Jennifer C. Moore, Rick I. Cohen, Hao Wu, Yi E. Sun, Ronald P. Hart posted to smallrna development by fenghezi on 2009-10-05 18:35:15 as along with 5 people and 2 groups fishtank inesdesantiago heliopais samgj ppgardne microRNA Journal picks
	Evolution of gene function and regulatory control after whole-genome duplication: Comparative analyses in vertebrates [My Copy] Genome Research, Vol. 19, No. 8. (13 August 2009), pp. 1404-1418. by Karin S. Kassahn, Vinh T. Dang, Simon J. Wilkins, Andrew C. Perkins, Mark A. Ragan posted to duplication by fenghezi on 2009-09-29 21:36:35 as along with 3 people venancio djkt JustinCrocker
	Defining mechanisms that regulate RNA polymerase II transcription in vivo [My Copy] Nature, Vol. 461, No. 7261. (09 September 2009), pp. 186-192. by Nicholas J. Fuda, M. Behfar Ardehali, John T. Lis posted to geneexp by fenghezi on 2009-09-29 21:19:59 as along with 4 people pkm cmzmasek TRHvidsten inesdesantiago
	The logic of chromatin architecture and remodelling at promoters. [My Copy] Nature, Vol. 461, No. 7261. (10 September 2009), pp. 193-198. by Bradley R. Cairns posted to histonemodification geneexp by fenghezi on 2009-09-29 21:19:08 as along with 8 people RyuOgawa hagechouchin443 cmzmasek TRHvidsten inesdesantiago rschulz humburg djkt
	Implications of chimaeric non-co-linear transcripts [My Copy] Nature, Vol. 461, No. 7261. (09 September 2009), pp. 206-211. by Thomas R. Gingeras posted to as by fenghezi on 2009-09-29 21:18:00 as along with 2 people and 1 group inesdesantiago daforerog Journal picks
	Targeted capture and massively parallel sequencing of 12 human exomes [My Copy] Nature, Vol. 461, No. 7261. (16 August 2009), pp. 272-276. by Sarah B. Ng, Emily H. Turner, Peggy D. Robertson, et al.Steven D. Flygare, Abigail W. Bigham, Choli Lee, Tristan Shaffer, Michelle Wong, Arindam Bhattacharjee, Evan E. Eichler, Michael Bamshad, Deborah A. Nickerson, Jay Shendure posted to variation genome_sequencing diseasegenes by fenghezi on 2009-09-29 21:13:23 as along with 23 people and 1 group seb1 hzoltan liqbbi chvlyl ongenetics psique n00c dswan jmanning2k torfinnnome GeeSharpMinor pkonings neils djkt daforerog PabloMarin stubrown danmaclean xingxu vplagnol druvus jandot frohike Journal picks
	Personalized copy number and segmental duplication maps using next-generation sequencing. [My Copy] Nature genetics, Vol. 41, No. 10. (30 October 2009), pp. 1061-1067. by Can Alkan, Jeffrey M. Kidd, Tomas Marques-Bonet, et al.Gozde Aksay, Francesca Antonacci, Fereydoun Hormozdiari, Jacob O. Kitzman, Carl Baker, Maika Malig, Onur Mutlu, S. Cenk Sahinalp, Richard A. Gibbs, Evan E. Eichler posted to technology duplication by fenghezi on 2009-09-29 18:38:03 as along with 30 people and 1 group ongenetics chvlyl leemachado daed gbenson n00c bozdagd dakelley sbmontgomery eshirdel merpublic shyamsg scmelton qayub natstreet Annab djkt nuin xingxu jamesmorris rdiaz brant torfinnnome jandot pkonings danmaclean daforerog frohike rschulz gangcai Journal picks
	Relative power and sample size analysis on gene expression profiling data [My Copy] BMC Genomics, Vol. 10, No. 1. (2009), 439. by M. van Iterson, P. A. C. 'T Hoen, P. Pedotti, et al.G. J. E. J. Hooiveld, J. T. den Dunnen, G. J. B. van Ommen, J. M. Boer, R. X. Menezes posted to technology rnaseq by fenghezi on 2009-09-28 17:25:45 as along with 5 people and 1 group dswan Stew mkiyer rdiaz barriot Bioinformatics - CRUK
	A Hierarchy of H3K4me3 and H3K27me3 Acquisition in Spatial Gene Regulation in Xenopus Embryos [My Copy] Developmental Cell, Vol. 17, No. 3. (15 September 2009), pp. 425-434. by Robert C. Akkers, Simon J. van Heeringen, Ulrike G. Jacobi, et al.Eva M. Janssen-Megens, Kees-Jan Françoijs, Hendrik G. Stunnenberg, Gert J. Veenstra posted to histonemodification development by fenghezi on 2009-09-28 17:22:11 as along with 2 people and 1 group ghattem inesdesantiago SIMR bioinformatics
	Role of the polycomb protein EED in the propagation of repressive histone marks [My Copy] Nature, Vol. advance online publication (20 September 2009) by Raphael Margueron, Neil Justin, Katsuhito Ohno, et al.Miriam L. Sharpe, Jinsook Son, William J. Drury III, Philipp Voigt, Stephen R. Martin, William R. Taylor, Valeria De Marco, Vincenzo Pirrotta, Danny Reinberg, Steven J. Gamblin posted to histonemodification by fenghezi on 2009-09-25 20:15:18 as along with 1 person clearbluespring
	SOX6 controls dorsal progenitor identity and interneuron diversity during neocortical development [My Copy] Nat Neurosci, Vol. 12, No. 10. (05 August 2009), pp. 1238-1247. by Eiman Azim, Denis Jabaudon, Ryann M. Fame, Jeffrey D. Macklis posted to neurodev by fenghezi on 2009-09-25 19:50:39 as
	Hippocampal development and neural stem cell maintenance require Sox2-dependent regulation of Shh [My Copy] Nat Neurosci, Vol. 12, No. 10. (06 September 2009), pp. 1248-1256. by Rebecca Favaro, Menella Valotta, Anna L. M. Ferri, et al.Elisa Latorre, Jessica Mariani, Claudio Giachino, Cesare Lancini, Valentina Tosetti, Sergio Ottolenghi, Verdon Taylor, Silvia K. Nicolis posted to neurodev by fenghezi on 2009-09-25 19:47:24 as
	Systematic Identification of mRNAs Recruited to Argonaute 2 by Specific microRNAs and Corresponding Changes in Transcript Abundance [My Copy] PLoS ONE, Vol. 3, No. 5. (7 May 2008), e2126. by David G. Hendrickson, Daniel J. Hogan, Daniel Herschlag, James E. Ferrell, Patrick O. Brown posted to technology smallrna by fenghezi on 2009-09-23 20:27:46 as along with 5 people diaz0058 jfr bootsy maralena yuwang
	Fast mapping of short sequences with mismatches, insertions and deletions using index structures. [My Copy] PLoS computational biology, Vol. 5, No. 9. (11 September 2009), e1000502. by Steve Hoffmann, Christian Otto, Stefan Kurtz, et al.Cynthia M. Sharma, Philipp Khaitovich, Jörg Vogel, Peter F. Stadler, Jörg Hackermüller posted to variation technology genome_sequencing by fenghezi on 2009-09-23 20:12:56 as along with 19 people and 4 groups cthachuk hzoltan darian nuin behindtherabbit jandot walshtp torfinnnome stubrown dswan polivares orzenil natstreet djkt jmcq n00c heliopais ppgardne druvus Bioinformatics BergmanLab iSEEM Journal picks
	The impact of retrotransposons on human genome evolution [My Copy] Nature Reviews Genetics, Vol. 10, No. 10. (01 October 2009), pp. 691-703. by Richard Cordaux, Mark A. Batzer posted to variation evo duplication by fenghezi on 2009-09-23 20:08:12 as along with 4 people and 1 group docv dakelley Annab qayub Journal picks
	Nucleosomes are well positioned in exons and carry characteristic histone modifications [My Copy] Genome Research, Vol. 19, No. 10. (18 October 2009), pp. 1732-1741. by Robin Andersson, Stefan Enroth, Alvaro Rada-Iglesias, Claes Wadelius, Jan Komorowski posted to histonemodification as by fenghezi on 2009-09-23 20:02:48 as along with 7 people xianjun owhitney lp2 megraw djkt inesdesantiago cajunsushi
	Chromatin organization marks exon-intron structure. [My Copy] Nature structural & molecular biology, Vol. 16, No. 9. (16 September 2009), pp. 990-995. by Schraga Schwartz, Eran Meshorer, Gil Ast posted to histonemodification as by fenghezi on 2009-09-23 20:01:13 as along with 4 people sebastien_vigneau inesdesantiago ericrpaquet ashkelon13
	Nucleosome positioning as a determinant of exon recognition [My Copy] Nature Structural & Molecular Biology, Vol. 16, No. 9. (16 August 2009), pp. 996-1001. by Hagen Tilgner, Christoforos Nikolaou, Sonja Althammer, et al.Michael Sammeth, Miguel Beato, Juan Valcarcel, Roderic Guigo posted to histonemodification as by fenghezi on 2009-09-23 19:59:58 as along with 4 people inesdesantiago sebastien_vigneau RamuAnandakrishnan aalibes
	Genomic analysis reveals a tight link between transcription factor dynamics and regulatory network architecture [My Copy] Molecular Systems Biology, Vol. 5 (18 August 2009) by Raja Jothi, S. Balaji, Arthur Wuster, et al.Joshua A. Grochow, Jorg Gsponer, Teresa M. Przytycka, L. Aravind, Madan M. Babu posted to network geneexp by fenghezi on 2009-09-23 19:55:24 as along with 12 people ashishanand apocapoc brianb dswan sjcockell zwang rdiaz megraw poirel TRHvidsten jjray biomcgary
	Reversible acetylation of the chromatin remodelling complex NoRC is required for non-coding RNA-dependent silencing [My Copy] Nature Cell Biology, Vol. 11, No. 8. (05 July 2009), pp. 1010-1016. by Yonggang Zhou, Kerstin-Maike Schmitz, Christine Mayer, Xuejun Yuan, Asifa Akhtar, Ingrid Grummt posted to histonemodification by fenghezi on 2009-09-23 19:51:07 as along with 1 person prensner
	Genome-wide detection and analysis of hippocampus core promoters using DeepCAGE [My Copy] Genome Research, Vol. 19, No. 2. (11 February 2009), pp. 255-265. by Eivind Valen, Giovanni Pascarella, Alistair Chalk, et al.Norihiro Maeda, Miki Kojima, Chika Kawazu, Mitsuyoshi Murata, Hiromi Nishiyori, Dejan Lazarevic, Dario Motti, Troels T. Marstrand, Man-Hung E. Tang, Xiaobei Zhao, Anders Krogh, Ole Winther, Takahiro Arakawa, Jun Kawai, Christine Wells, Carsten Daub, Matthias Harbers, Yoshihide Hayashizaki, Stefano Gustincich, Albin Sandelin, Piero Carninci posted to rnaseq neurodev by fenghezi on 2009-09-23 17:35:54 as along with 6 people megraw guhjy YukaH antonkratz absterga xiaobeizhao
	Transcriptome of embryonic and neonatal mouse cortex by high-throughput RNA sequencing [My Copy] Proceedings of the National Academy of Sciences, Vol. 106, No. 31. (4 August 2009), pp. 12741-12746. by Xinwei Han, Xia Wu, Wen-Yu Chung, et al.Tao Li, Anton Nekrutenko, Naomi S. Altman, Gong Chen, Hong Ma posted to rnaseq neurodev by fenghezi on 2009-09-23 17:26:58 as along with 4 people manduca stubrown mbj daforerog
	Mouse Brain Organization Revealed Through Direct Genome-Scale TF Expression Analysis [My Copy] Science, Vol. 306, No. 5705. (24 December 2004), pp. 2255-2257. by Paul A. Gray, Hui Fu, Ping Luo, et al.Qing Zhao, Jing Yu, Annette Ferrari, Toyoaki Tenzen, Dong-in Yuk, Eric F. Tsung, Zhaohui Cai, John A. Alberta, Le-ping Cheng, Yang Liu, Jan M. Stenman, M. Todd Valerius, Nathan Billings, Haesun A. Kim, Michael E. Greenberg, Andrew P. McMahon, David H. Rowitch, Charles D. Stiles, Qiufu Ma posted to neurodev by fenghezi on 2009-09-23 17:02:38 as along with 2 people tuannn brixtonmc
	A high throughput embryonic stem cell screen identifies Oct-2 as a bifunctional regulator of neuronal differentiation [My Copy] Genes & Development, Vol. 23, No. 5. (1 March 2009), pp. 575-588. by Elias Theodorou, George Dalembert, Christopher Heffelfinger, et al.Eric White, Sherman Weissman, Lynn Corcoran, Michael Snyder posted to neurodev by fenghezi on 2009-09-23 16:56:36 as
	Sensitive digital quantification of DNA methylation in clinical samples [My Copy] Nat Biotech, Vol. 27, No. 9. (16 August 2009), pp. 858-863. by Meng Li, Wei-dong Chen, Nickolas Papadopoulos, et al.Steven N. Goodman, Niels C. Bjerregaard, Soren Laurberg, Bernard Levin, Hartmut Juhl, Nadir Arber, Helen Moinova, Kris Durkee, Kerstin Schmidt, Yiping He, Frank Diehl, Victor E. Velculescu, Shibin Zhou, Luis A. Diaz, Kenneth W. Kinzler, Sanford D. Markowitz, Bert Vogelstein posted to mecg by fenghezi on 2009-09-14 21:16:03 as along with 2 people RITTIE rschulz
	Single-molecule sequencing of an individual human genome [My Copy] Nature Biotechnology, Vol. 27, No. 9. (10 August 2009), pp. 847-850. by Dmitry Pushkarev, Norma F. Neff, Stephen R. Quake posted to variation technology genome_sequencing by fenghezi on 2009-09-14 21:07:36 as along with 25 people and 3 groups JamesBarger n00c ethanmj MurphysLab leliavski inesdesantiago megraw kintoki neils daforerog gangcai mqbphcw3 jmanning2k jonilaserson druvus alexknight qayub natstreet mtagaya kinestetika guhjy installe psique SeaBird danmaclean Journal picks Shared Literature Resource of the Microbial Fitness Group - MPI Bremen Bioinformatics
	ChIP\|[ndash]\|seq: advantages and challenges of a maturing technology [My Copy] Nature Reviews Genetics, Vol. 10, No. 10. (08 September 2009), pp. 669-680. by Peter J. Park posted to chip-seq by fenghezi on 2009-09-14 20:17:06 as along with 23 people and 6 groups hzoltan dchughes RyuOgawa heliopais giovenko inesdesantiago pradiptaray dakelley clearbluespring akundaje rdiaz kimorley leliavski humburg reyez qayub tonamswish robertrentzsch polivares idonaldson rschulz cvaldes danmaclean Journal picks Orengo Group Journal Picks JLab BergmanLab CTCF Chromatin

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histonemodification	50
geneexp	48
variation	36
technology	35
smallrna	30
diseasegenes	27
development	22
motif	19
evo	17
mecg	16
chipseq	15
network	14
as	12
rnaseq	11
genome_sequencing	9
integration	9
neurodev	9
duplication	8
rna	8
chip-seq	7
autism	6
rest	6
deadgene	5
monoallelicexp	4
replication	4
plant	3
neuro	2
rnaedit	1
rna-seq	1
small	1

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