fernan's library 33 articles Export

	Haploid Genetic Screens in Human Cells Identify Host Factors Used by Pathogens [My Copy] Science, Vol. 326, No. 5957. (27 November 2009), pp. 1231-1235. by Jan E. Carette, Carla P. Guimaraes, Malini Varadarajan, et al.Annie S. Park, Irene Wuethrich, Alzbeta Godarova, Maciej Kotecki, Brent H. Cochran, Eric Spooner, Hidde L. Ploegh, Thijn R. Brummelkamp posted to screen pathogenesis human haploid genetic by fernan on 2009-11-27 13:52:40 as along with 2 people and 1 group 3rd gbloeb ronbun_2009au
	Bidirectional silencing of RNA polymerase I transcription by a strand switch region in Trypanosoma brucei [My Copy] Nucl. Acids Res., Vol. 37, No. 15. (1 August 2009), pp. 5007-5018. by Simon Haenni, Erwin Studer, Gabriela S. Burkard, Isabel Roditi posted to trypanosoma transcription switch strand silencing brucei by fernan on 2009-08-26 13:05:10 as
	Infection by the Sylvio X10/4 clone of Trypanosoma cruzi: Relevance of a low-virulence model of Chagas' disease [My Copy] Microbes and Infection (04 August 2009) by Cláudio R. F. Marinho, Luis N. N. Apaza, Karina R. Bortoluci, et al.André L. Bombeiro, Daniella Z. Bucci, Marcos G. Grisotto, Luiz R. Sardinha, Christian E. Jorquera, Sergio Lira, Maria R. D'Império Lima posted to trypanosoma sylvio low-virulence cruzi chagas by fernan on 2009-08-20 14:14:51 as
	Genome-scale multilocus microsatellite typing of Trypanosoma cruzi discrete typing unit I reveals phylogeographic structure and specific genotypes linked to human infection. [My Copy] PLoS pathogens, Vol. 5, No. 5. (May 2009) by M. S. Llewellyn, M. A. Miles, H. J. Carrasco, et al.M. D. Lewis, M. Yeo, J. Vargas, F. Torrico, P. Diosque, V. Valente, S. A. Valente, M. W. Gaunt posted to clonal diversity sylvatic tcruzi-i trypanosoma by fernan on 2009-05-09 02:37:21 as
	Identification and Specific Localization of Tyrosine-Phosphorylated Proteins in Trypanosoma brucei [My Copy] Eukaryotic Cell, Vol. 8, No. 4. (1 April 2009), pp. 617-626. by Isabelle R. Nett, Lindsay Davidson, Douglas Lamont, Michael A. Ferguson posted to phosphorilated proteins proteomics trypanosoma by fernan on 2009-04-24 23:27:19 as
	Structure-based Ligand Design and the Promise Held for Antiprotozoan Drug Discovery [My Copy] J. Biol. Chem., Vol. 284, No. 18. (1 May 2009), pp. 11749-11753. by William N. Hunter posted to discovery drug leishmania structure trypanosoma by fernan on 2009-04-24 23:26:06 as
	Identifying the proteins to which small-molecule probes and drugs bind in cells. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 106, No. 12. (24 March 2009), pp. 4617-4622. by S. E. Ong, M. Schenone, A. A. Margolin, et al.X. Li, K. Do, M. K. Doud, D. R. Mani, L. Kuai, X. Wang, J. L. Wood, N. J. Tolliday, A. N. Koehler, L. A. Marcaurelle, T. R. Golub, R. J. Gould, S. L. Schreiber, S. A. Carr posted to drug probes small-molecule targets by fernan on 2009-03-25 02:13:39 as along with 3 people guhjy mingzhi brianb
	Formation of new chromosomes as a virulence mechanism in yeast Candida glabrata. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 106, No. 8. (24 February 2009), pp. 2688-2693. by S. Poláková, C. Blume, J. A. Zárate, et al.M. Mentel, D. Jørck-Ramberg, J. Stenderup, J. Piskur posted to candida chromosomal variation virulence by fernan on 2009-03-17 11:26:50 as along with 2 people and 1 group katiejclowers bcondon Morgan Lab-KSU
	Trypanosoma cruzi CYP51 Inhibitor Derived from a Mycobacterium tuberculosis Screen Hit. [My Copy] PLoS neglected tropical diseases, Vol. 3, No. 2. (2009) by C. K. Chen, P. S. Doyle, L. V. Yermalitskaya, et al.Z. B. Mackey, K. K. Ang, J. H. McKerrow, L. M. Podust posted to drug gene polymorphism target tcruzi by fernan on 2009-02-17 17:54:45 as
	Trypanosoma cruzi: Multiplex PCR to detect and classify strains according to groups I and II. [My Copy] Experimental parasitology (16 December 2008) by Daniel B B. Liarte, Silvane M F M. Murta, Mario Steindel, Alvaro J J. Romanha posted to diagnostics multiplex pcr strains tcruzi-i tcruzi-ii by fernan on 2009-02-17 15:42:39 as
	Transforming growth factor beta 1 (TGFbeta1) gene polymorphisms and Chagas disease susceptibility in Peruvian and Colombian patients. [My Copy] Cytokine (9 January 2009) by Jose E E. Calzada, Yasmina Beraún, Clara I I. González, Javier Martín posted to gene polymorphism tcruzi by fernan on 2009-02-17 15:40:06 as
	VariVis: a visualisation toolkit for variation databases. [My Copy] BMC bioinformatics, Vol. 9 (23 April 2008), 206. by Timothy D. Smith, Richard G. Cotton posted to genetic variation visualisation by fernan on 2008-08-27 17:11:49 as along with 2 people daforerog guhjy
	Ligand binding by repeat proteins: natural and designed [My Copy] Current Opinion in Structural Biology, Vol. In Press, Corrected Proof by Tijana Z. Grove, Aitziber L. Cortajarena, Lynne Regan posted to binding ligand proteins repeat repetitive by fernan on 2008-08-21 13:11:51 as along with 1 person viktor21614
	Widely distributed noncoding purifying selection in the human genome [My Copy] PNAS (17 July 2007), 0705140104. by Saurabh Asthana, William S. Noble, Gregory Kryukov, Charles E. Grant, Shamil Sunyaev, John A. Stamatoyannopoulos posted to human noncoding purifying selection by fernan on 2008-08-19 13:42:49 as along with 7 people and 1 group daforerog bpb pradiptaray cabbagezs mimulus_99 cisevol bpcusack cis-regulatory-evolution
	The Parasexual Cycle in Candida albicans Provides an Alternative Pathway to Meiosis for the Formation of Recombinant Strains [My Copy] PLoS Biology, Vol. 6, No. 5. (1 May 2008), e110. by Anja Forche, Kevin Alby, Dana Schaefer, Alexander D. Johnson, Judith Berman, Richard J. Bennett posted to candida cycle parasexual recombinant strains by fernan on 2008-05-29 13:02:38 as along with 1 person and 1 group stajich Mycology
	Birds Do It, Bees Do It, but Candida albicans Does It Differently [My Copy] PLoS Biology, Vol. 6, No. 5. (1 May 2008), e121. by Richard Robinson posted to candida mating unconventional by fernan on 2008-05-29 12:57:10 as
	Differential Detection of Multiple Respiratory Pathogens [My Copy] Emerging Infectious Diseases, Vol. 11, No. 2. (2005) by T. Briese, G. Palacios, M. Kokoris, et al.O. Jabado, Z. Liu, N. Renwick, V. Kapoor, I. Casas, F. Pozo, R. Limberger, P. Perez-Brena, J. Ju, W. I. Lipkin posted to diagnostics masscode masstag pcr by fernan on 2008-05-15 14:01:26 as
	Identifying four Trypanosoma cruzi I isolate haplotypes from different geographic regions in Colombia. [My Copy] Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases, Vol. 7, No. 4. (July 2007), pp. 535-539. by C. Herrera, M. D. Bargues, A. Fajardo, et al.M. Montilla, O. Triana, G. A. Vallejo, F. Guhl posted to cruzi geography haplotypes isolate tcruzi-i trypanosoma by fernan on 2008-04-29 18:02:25 as along with 1 person rcosentino
	A Trypanosoma cruzi small surface molecule provides the first immunological evidence that Chagas' disease is due to a single parasite lineage. [My Copy] The Journal of experimental medicine, Vol. 195, No. 4. (18 February 2002), pp. 401-413. by J. M. Di Noia, C. A. Buscaglia, C. R. De Marchi, I. C. Almeida, A. C. Frasch posted to chagas cruzi lineages polymorphism trypanosoma tssa by fernan on 2008-04-23 19:07:22 as
	Codon-Substitution Models for Heterogeneous Selection Pressure at Amino Acid Sites [My Copy] Genetics, Vol. 155, No. 1. (1 May 2000), pp. 431-449. by Ziheng Yang, Rasmus Nielsen, Nick Goldman, Anne-Mette K. Pedersen posted to evolution non-synonymous selection substitution synonymous by fernan on 2008-04-14 20:37:19 as along with 8 people druvus BioNica Natasha dylan77 Garamonfok tale gjuggler emptyhb
	Estimating synonymous and nonsynonymous substitution rates under realistic evolutionary models. [My Copy] Mol Biol Evol, Vol. 17, No. 1. (January 2000), pp. 32-43. by Z. Yang, R. Nielsen posted to evolution non-synonymous rate substitution synonymous by fernan on 2008-04-14 20:36:20 as along with 9 people and 1 group katholt bjorns hdopazo BioNica timflutre Garamonfok ankur_iitg RamuAnandakrishnan Ema BioinfoCIPF
	Functional diversification of duplicate genes through subcellular adaptation of encoded proteins [My Copy] Genome Biology, Vol. 9 (12 March 2008), R54. by Ana C. Marques, Nicolas Vinckenbosh, David Brawand, Henrik Kaessmann posted to diversification duplicate genes subcellular by fernan on 2008-04-11 15:26:45 as along with 3 people Schmidtc djkt bpcusack
	Genome assembly forensics: finding the elusive mis-assembly [My Copy] Genome Biology, Vol. 9, No. 3. (14 March 2008), R55. by Adam Phillippy, Michael Schatz, Mihai Pop posted to assembly genome mis-assembly by fernan on 2008-04-11 15:21:49 as along with 10 people and 1 group n00c Thaverkamp kiekyon dakelley jasontsai orzenil druvus lp2 Neeperando GustavoLacerda DeNovoAssembly-SIMR
	Computational identification of obligatorily autocatalytic replicators embedded in metabolic networks. [My Copy] Genome biology, Vol. 9, No. 3. (2008) by A. Kun, B. Papp, E. Szathmáry posted to autocatalytic metabolic networks replicators seminars by fernan on 2008-04-11 15:06:43 as along with 5 people Scis0000002 schwartzjmc neils grahamc roys
	Natural selection of protein structural and functional properties: a SNP perspective [My Copy] Genome Biology, Vol. 9, No. 4. (2008) by Jinfeng Liu, Yan Zhang, Xingye Lei, Zemin Zhang posted to dnds evolution human polymorphism selection snps by fernan on 2008-04-08 20:00:20 as along with 4 people and 1 group operon stajich ramensky dandaman Mycology
	Structural diversity of G protein-coupled receptors and significance for drug discovery [My Copy] Nature Reviews Drug Discovery, Vol. 7, No. 4., pp. 339-357. by Malin C. Lagerström, Helgi B. Schiöth posted to discovery diversity drug gpcrs protein-coupled receptors structural targets by fernan on 2008-04-08 02:40:30 as along with 6 people leocmcheung yuslinaz jerome guhjy nprcrzy superpyrin
	Genome variation and evolution of the malaria parasite Plasmodium falciparum. [My Copy] Nat Genet (10 December 2006) by Daniel C C. Jeffares, Arnab Pain, Andrew Berry, et al.Anthony V V. Cox, James Stalker, Catherine E E. Ingle, Alan Thomas, Michael A A. Quail, Kyle Siebenthall, Anne-Catrin C. Uhlemann, Sue Kyes, Sanjeev Krishna, Chris Newbold, Emmanouil T T. Dermitzakis, Matthew Berriman posted to falciparum genome plasmodium snps variation wide by fernan on 2008-04-08 02:34:10 as along with 4 people aswin xingxu shung Neeperando
	A genome-wide map of diversity in Plasmodium falciparum. [My Copy] Nat Genet (10 December 2006) by Sarah K K. Volkman, Pardis C C. Sabeti, David Decaprio, et al.Daniel E E. Neafsey, Stephen F F. Schaffner, Danny A A. Milner, Johanna P P. Daily, Ousmane Sarr, Daouda Ndiaye, Omar Ndir, Soulyemane Mboup, Manoj T T. Duraisingh, Amanda Lukens, Alan Derr, Nicole Stange-Thomann, Skye Waggoner, Robert Onofrio, Liuda Ziaugra, Evan Mauceli, Sante Gnerre, David B B. Jaffe, Joanne Zainoun, Roger C C. Wiegand, Bruce W W. Birren, Daniel L L. Hartl, James E E. Galagan, Eric S S. Lander, Dyann F F. Wirth posted to diversity falciparum genome plasmodium snps variation wide by fernan on 2008-04-08 02:33:26 as along with 4 people aswin xingxu shung jasonflannick
	Genome-wide variation and identification of vaccine targets in the Plasmodium falciparum genome [My Copy] Nature Genetics, Vol. 39, No. 1. (10 December 2006), pp. 126-130. by Jianbing Mu, Philip Awadalla, Junhui Duan, et al.Kate M. Mcgee, Jon Keebler, Karl Seydel, Gilean A. T. Mcvean, Xin-Zhuan Su posted to falciparum genome plasmodium snps targets vaccine variation wide by fernan on 2008-04-08 02:32:00 as along with 6 people ilyashl becarmson shigepong GeeSharpMinor xingxu smbe2008
	The Genome Sequence of Trypanosoma cruzi, Etiologic Agent of Chagas Disease [My Copy] Science, Vol. 309, No. 5733. (15 July 2005), pp. 409-415. by Najib M. El-Sayed, Peter J. Myler, Daniella C. Bartholomeu, et al.Daniel Nilsson, Gautam Aggarwal, Anh-Nhi Tran, Elodie Ghedin, Elizabeth A. Worthey, Arthur L. Delcher, Gaelle Blandin, Scott J. Westenberger, Elisabet Caler, Gustavo C. Cerqueira, Carole Branche, Brian Haas, Atashi Anupama, Erik Arner, Lena Aslund, Philip Attipoe, Esteban Bontempi, Frederic Bringaud, Peter Burton, Eithon Cadag, David A. Campbell, Mark Carrington, Jonathan Crabtree, Hamid Darban, Jose F. da Silveira, Pieter de Jong, Kimberly Edwards, Paul T. Englund, Gholam Fazelina, Tamara Feldblyum, Marcela Ferella, Alberto C. Frasch, Keith Gull, David Horn, Lihua Hou, Yiting Huang, Ellen Kindlund, Michele Klingbeil, Sindy Kluge, Hean Koo, Daniela Lacerda, Mariano J. Levin, Hernan Lorenzi, Tin Louie, Carlos R. Machado, Richard Mcculloch, Alan Mckenna, Yumi Mizuno, Jeremy C. Mottram, Siri Nelson, Stephen Ochaya, Kazutoyo Osoegawa, Grace Pai, Marilyn Parsons, Martin Pentony, Ulf Pettersson, Mihai Pop, Jose L. Ramirez, Joel Rinta, Laura Robertson, Steven L. Salzberg, Daniel O. Sanchez, Amber Seyler, Reuben Sharma, Jyoti Shetty, Anjana J. Simpson, Ellen Sisk, Martti T. Tammi, Rick Tarleton, Santuza Teixeira, Susan Van Aken, Christy Vogt, Pauline N. Ward, Bill Wickstead, Jennifer Wortman, Owen White, Claire M. Fraser, Kenneth D. Stuart, Bjorn Andersson posted to cruzi trypanosoma cl-brener genome by fernan on 2008-04-01 21:09:46 as along with 4 people and 1 group jwortman bjorns cmmorel azazello MBLAB
	Validation of spermidine synthase as a drug target in African trypanosomes. [My Copy] Biochem J, Vol. 409, No. 2. (15 January 2008), pp. 563-569. by M. C. Taylor, H. Kaur, B. Blessington, J. M. Kelly, S. R. Wilkinson posted to brucei drug polyamine rnai spermidine targets trypanosoma trypanosomiasis validation by fernan on 2008-03-31 22:12:27 as
	Genetic profiling of Trypanosoma cruzi directly in infected tissues using nested PCR of polymorphic microsatellites. [My Copy] Int J Parasitol (7 November 2007) by Helder Magno Silva M. Valadares, Juliana Ramos R. Pimenta, Jorge Marcelo M. de Freitas, et al.Tomás Duffy, Daniella C C. Bartholomeu, Riva de Paula Oliveira, Egler Chiari, Maria da Consolação Vieira D. Moreira, Geraldo Brasileiro B. Filho, Alejandro Gabriel G. Schijman, Glória Regina R. Franco, Carlos Renato R. Machado, Sérgio Danilo Junho D. Pena, Andréa Mara M. Macedo posted to cruzi genetic isolate markers polymorphic profiling trypanosoma typing by fernan on 2008-03-31 21:44:36 as along with 1 person cmmorel
	A mechanism for cross-resistance to nifurtimox and benznidazole in trypanosomes [My Copy] Proceedings of the National Academy of Sciences (26 March 2008), 0711014105. by Shane R. Wilkinson, Martin C. Taylor, David Horn, John M. Kelly, Ian Cheeseman posted to benznidazole chagas drug nifurtimox nitroreductase resistance targets by fernan on 2008-03-31 13:18:56 as

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trypanosoma	10
drug	6
cruzi	5
genome	5
targets	5
variation	5
polymorphism	4
snps	4
candida	3
chagas	3
diversity	3
evolution	3
falciparum	3
genetic	3
human	3
plasmodium	3
selection	3
tcruzi-i	3
wide	3
brucei	2
diagnostics	2
discovery	2
gene	2
isolate	2
non-synonymous	2
pcr	2
proteins	2
strains	2
substitution	2
synonymous	2
tcruzi	2
assembly	1
autocatalytic	1
benznidazole	1
binding	1
chromosomal	1
cl-brener	1
clonal	1
cycle	1
diversification	1
dnds	1
duplicate	1
genes	1
geography	1
gpcrs	1
haploid	1
haplotypes	1
leishmania	1
ligand	1
lineages	1
low-virulence	1
markers	1
masscode	1
masstag	1
mating	1
metabolic	1
mis-assembly	1
multiplex	1
networks	1
nifurtimox	1
nitroreductase	1
noncoding	1
parasexual	1
pathogenesis	1
phosphorilated	1
polyamine	1
polymorphic	1
probes	1
profiling	1
protein-coupled	1
proteomics	1
purifying	1
rate	1
receptors	1
recombinant	1
repeat	1
repetitive	1
replicators	1
resistance	1
rnai	1
screen	1
seminars	1
silencing	1
small-molecule	1
spermidine	1
strand	1
structural	1
structure	1
subcellular	1
switch	1
sylvatic	1
sylvio	1
target	1
tcruzi-ii	1
transcription	1
trypanosomiasis	1
tssa	1
typing	1
unconventional	1
vaccine	1
validation	1
virulence	1
visualisation	1

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