fishtank's library 334 articles Export

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	Precision proteomics: The case for high resolution and high mass accuracy [My Copy] Proceedings of the National Academy of Sciences (2008) by Matthias Mann, Neil L. Kelleher posted to proteomics_identification proteomics_mrm by fishtank on 2009-05-13 18:06:20 as along with 4 people and 1 group perlr guhjy nedwards brianb microbiology_nijmegen
	Evolution of Biological Networks (II) by Martin Lercher [My Copy] by Martin Lercher posted to biochemical_pathway evolution fba flux_regulation lecture-notes by fishtank on 2007-12-06 20:05:18 as
	Approaches to Biosimulation of Cellular Processes [My Copy] Journal of Biological Physics, Vol. 32, No. 3-4. (October 2006), pp. 273-288. by Bruggeman, F., Westerhoff, H. posted to kinetic_simulation-review by fishtank on 2007-09-26 18:37:20 as
	Energy metabolism and biotransformation as endpoints to pre-screen hepatotoxicity using a liver spheroid model [My Copy] Toxicology and Applied Pharmacology, Vol. 216, No. 2. (15 October 2006), pp. 293-302. by Jinsheng Xu, Wendy M. Purcell posted to disease galactose by fishtank on 2007-08-29 11:06:18 as
	Glucocorticoids, metabolism and metabolic diseases [My Copy] Molecular and Cellular Endocrinology In Glucocorticoid Receptor Action and Selective Glucocorticoid Receptor Agonists (SEGRAs), Vol. 275, No. 1-2. (15 September 2007), pp. 43-61. by Alexandros Vegiopoulos, Stephan Herzig posted to diabetes disease by fishtank on 2007-08-29 10:53:38 as along with 1 person guhjy
	Mechanistic model of fuel selection in the muscle [My Copy] Journal of Theoretical Biology, Vol. 242, No. 1. (7 September 2006), pp. 151-163. by P. de Beaudrap, G. Witten, G. Biltz, E. Perrier posted to diabetes disease by fishtank on 2007-08-29 10:50:46 as
	Computational approaches to cellular rhythms. [My Copy] Nature, Vol. 420, No. 6912. (14 November 2002), pp. 238-245. by A. Goldbeter posted to oscillations by fishtank on 2007-08-25 21:11:13 as along with 6 people and 2 groups mmcclean camster rklancer Happybene johncumbers cerkut dbk-lab contact-id
	From Biophysics to models of network function [My Copy] Annual Review of Neuroscience, Vol. 21 (1998), pp. 25-45. by Eve Marder posted to neuroscience-review by fishtank on 2007-08-25 21:07:12 as
	Dynamic simulation of red blood cell metabolism and its application to the analysis of a pathological condition [My Copy] Theoretical Biology and Medical Modelling, Vol. 2, No. 1. (2005) by Yoichi Nakayama, Ayako Kinoshita, Masaru Tomita posted to disease kinetic_simulation by fishtank on 2007-09-14 23:34:05 as along with 2 people ynaito csanford
	Role of microRNAs in diabetes [My Copy] Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms, Vol. 1779, No. 11. (November 2008), pp. 697-701. by X. Tang, G. Tang, S. Ozcan posted to mirna by fishtank on 2009-11-01 22:31:35 as along with 1 person guhjy
	Breast cancer biology: the multifaceted roles of mesenchymal stem cells. [My Copy] Journal of oncology, Vol. 2008 (2008) by Shyam A. Patel, Andrew C. Heinrich, Bobby Y. Reddy, Balaji Srinivas, Nicole Heidaran, Pranela Rameshwar posted to mirna cancer_biology by fishtank on 2009-10-15 18:02:57 as
	Widespread changes in protein synthesis induced by microRNAs. [My Copy] Nature, Vol. 455, No. 7209. (4 September 2008), pp. 58-63. by Matthias Selbach, Björn Schwanhäusser, Nadine Thierfelder, Zhuo Fang, Raya Khanin, Nikolaus Rajewsky posted to mirna by fishtank on 2009-09-21 17:40:04 as along with 25 people and 2 groups framancuso inesdesantiago lwaldron danaiancu dswan TRHvidsten pengchy valeriehilgers druvus guhjy martin-novak cajunsushi heliopais vertikalist jfr caizhiqiang psique megraw neils j_rodriguez erel10 maralena reyez mtagaya gdb microRNA BTS-PT-AS-CS
	The impact of microRNAs on protein output. [My Copy] Nature, Vol. 455, No. 7209. (4 September 2008), pp. 64-71. by Daehyun Baek, Judit Villén, Chanseok Shin, Fernando D. Camargo, Steven P. Gygi, David P. Bartel posted to mirna by fishtank on 2009-09-21 17:38:10 as along with 25 people and 1 group framancuso danaiancu gderwin pengchy valeriehilgers guhjy kmdaily martin-novak samgj heliopais askrajiv natsdorf jfr frohike giovenko mtagaya megraw djkt brianb emptyhb erel10 maralena ajaymalik caizhiqiang gdb microRNA
	Selective stabilization of mammalian microRNAs by 3â² adenylation mediated by the cytoplasmic poly(A) polymerase GLD-2 [My Copy] Genes & Development, Vol. 23, No. 4. (15 February 2009), pp. 433-438. by Takayuki Katoh, Yuriko Sakaguchi, Kenjyo Miyauchi, et al.Takeo Suzuki, Shin-ichi Kashiwabara, Tadashi Baba, Tsutomu Suzuki posted to mirna by fishtank on 2009-09-17 08:16:50 as along with 3 people and 1 group heliopais tprpip valeriehilgers microRNA
	The molecular machines that mediate microRNA maturation [My Copy] Journal of Cellular and Molecular Medicine, Vol. 13, No. 1. (January 2009), pp. 54-60. by Pick-Wei Lau, Ian J. MacRae posted to mirna by fishtank on 2009-09-17 08:10:02 as along with 4 people GeeSharpMinor guhjy valeriehilgers daforerog
	Systematic evaluation of microRNA processing patterns in tissues, cell lines, and tumors [My Copy] RNA, Vol. 14, No. 1. (19 January 2008), pp. 35-42. by Eun J. Lee, Myungwon Baek, Yuriy Gusev, Daniel J. Brackett, Gerard J. Nuovo, Thomas D. Schmittgen posted to mirna by fishtank on 2009-08-31 22:52:19 as along with 5 people and 1 group daforerog heliopais Alexander_Kanitz yugusev maralena microRNA
	Human polymorphism at microRNAs and microRNA target sites. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 104, No. 9. (27 February 2007), pp. 3300-3305. by Matthew A. Saunders, Han Liang, Wen-Hsiung H. Li posted to mirna by fishtank on 2009-08-31 22:50:26 as along with 6 people and 3 groups guhjy songpku daforerog jfr dchughes heliopais microRNA G4ID Genetics-of-Gambling
	miRBase: microRNA sequences, targets and gene nomenclature. [My Copy] Nucleic acids research, Vol. 34, No. Database issue. (1 January 2006), pp. D140-144. by Sam Griffiths-Jones, Russell J. Grocock, Stijn van Dongen, Alex Bateman, Anton J. Enright posted to mirna by fishtank on 2009-08-28 17:35:27 as along with 12 people and 3 groups homonecloco antonkratz giovenko marcius eckart_bindewald tardigrade cdawson ealloza Garamonfok natstreet maralena elfar BioinfoCIPF SGU-CIPF GIG
	Strategies to determine the biological function of microRNAs. [My Copy] Nature genetics, Vol. 38 Suppl (June 2006) by Jan Krützfeldt, Matthew N. Poy, Markus Stoffel posted to mirna by fishtank on 2009-08-28 17:29:48 as along with 3 people and 1 group jfr andersbj mtagaya microRNA
	RNA stem-loops: to be or not to be cleaved by RNAse III. [My Copy] RNA (New York, N.Y.), Vol. 13, No. 4. (13 April 2007), pp. 457-462. by William Ritchie, Matthieu Legendre, Daniel Gautheret posted to mirna by fishtank on 2009-08-28 17:26:16 as along with 3 people and 1 group andersbj matstuff maralena microRNA
	A single-molecule method for the quantitation of microRNA gene expression [My Copy] Nature Methods, Vol. 3, No. 1. (20 December 2005), pp. 41-46. by Lori A. Neely, Sonal Patel, Joanne Garver, et al.Michael Gallo, Maria Hackett, Stephen McLaughlin, Mark Nadel, John Harris, Steve Gullans, Jenny Rooke posted to mirna by fishtank on 2009-08-28 17:22:33 as along with 2 people and 1 group jfr Vincent_Rouilly microRNA
	MicroRNA signatures in human cancers. [My Copy] Nature reviews. Cancer, Vol. 6, No. 11. (November 2006), pp. 857-866. by George A. Calin, Carlo M. Croce posted to mirna by fishtank on 2009-08-27 23:22:23 as along with 10 people tonamswish abhattac myzhang ealloza frohike jfr tardigrade dchughes maralena srp33
	miRNA Profiling of Naïve, Effector and Memory CD8 T Cells [My Copy] PLoS ONE, Vol. 2, No. 10. (10 October 2007), e1020. by Haoquan Wu, Joel R. Neilson, Priti Kumar, et al.Monika Manocha, Premlata Shankar, Phillip A. Sharp, N. Manjunath posted to mirna by fishtank on 2009-08-27 22:54:04 as along with 1 person and 1 group heliopais microRNA
	Next-generation DNA sequencing [My Copy] Nature Biotechnology, Vol. 26, No. 10. (09 October 2008), pp. 1135-1145. by Jay Shendure, Hanlee Ji posted to mirna by fishtank on 2009-08-27 22:28:25 as along with 42 people and 3 groups cthachuk giovenko heliopais seb1 installe niallhaslam Vincent_Rouilly rschulz bluto Annab katholt jmcq michaelbarton n00c jfr dna nzm farhat idoerg mhz mmartin antonkratz jbhiatt yupu behindtherabbit guhjy Pascalichouchou frohike dakelley ptrobajo zwang Zephyrus psique natstreet druvus nuin alexknight reyez dbk wsjames pengchy GeeSharpMinor Bioinformatics Roswell Cancer Crosstalk Oxford Virology
	Connecting microRNA Genes to the Core Transcriptional Regulatory Circuitry of Embryonic Stem Cells [My Copy] Vol. 134, No. 3. (8 August 2008), pp. 521-533. by Alexander Marson, Stuart S. Levine, Megan F. Cole, et al.Garrett M. Frampton, Tobias Brambrink, Sarah Johnstone, Matthew G. Guenther, Wendy K. Johnston, Marius Wernig, Jamie Newman, J. Mauro Calabrese, Lucas M. Dennis, Thomas L. Volkert, Sumeet Gupta, Jennifer Love, Nancy Hannett, Phillip A. Sharp, David P. Bartel, Rudolf Jaenisch, Richard A. Young posted to mirna by fishtank on 2009-08-27 21:45:07 as along with 2 people tonamswish gdb
	Applications of next-generation sequencing technologies in functional genomics [My Copy] Genomics, Vol. 92, No. 5. (11 November 2008), pp. 255-264. by O. Morozova, M. Marra posted to mirna by fishtank on 2009-08-27 21:43:01 as along with 16 people and 2 groups heliopais viren4388 jandot lusk natstreet druvus floatingpoint usagi-kirin malcook abizar reyez dchughes xingxu giovenko GeeSharpMinor guhjy Journal picks SIMR bioinformatics
	Technical variables in high-throughput miRNA expression profiling: Much work remains to be done [My Copy] Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms, Vol. 1779, No. 11. (7 November 2008), pp. 758-765. by P. Nelson, W. Wang, B. Wilfred, G. Tang posted to mirna by fishtank on 2009-08-27 10:04:59 as along with 3 people and 1 group heliopais jfr guhjy microRNA
	Evidence for human microRNA-offset RNAs in small RNA sequencing data [My Copy] Bioinformatics, Vol. 25, No. 18. (15 September 2009), pp. 2298-2301. by David Langenberger, Clara Bermudez-Santana, Jana Hertel, Steve Hoffmann, Philipp Khaitovich, Peter F. Stadler posted to mirna by fishtank on 2009-07-24 18:32:05 as along with 7 people and 1 group microRNA heliopais dswan natstreet n00c kutter01 samgj microRNA
	Novel microRNA candidates and miRNA-mRNA pairs in embryonic stem (ES) cells. [My Copy] PloS one, Vol. 3, No. 7. (2008) by P. Gu, J. G. Reid, X. Gao, et al.C. A. Shaw, C. Creighton, P. L. Tran, X. Zhou, R. B. Drabek, D. L. Steffen, D. M. Hoang, M. K. Weiss, A. O. Naghavi, J. El-daye, M. F. Khan, G. B. Legge, D. A. Wheeler, R. A. Gibbs, J. N. Miller, A. J. Cooney, P. H. Gunaratne posted to mirna by fishtank on 2009-07-24 18:04:51 as along with 1 person samgj
	Approaches to microRNA discovery. [My Copy] Nature genetics, Vol. 38 Suppl (June 2006) by E. Berezikov, E. Cuppen, R. H. Plasterk posted to mirna by fishtank on 2009-07-24 18:02:49 as along with 3 people and 1 group NicholasErho andersbj mtagaya microRNA
	miRanalyzer: a microRNA detection and analysis tool for next-generation sequencing experiments [My Copy] Nucl. Acids Res., Vol. 37, No. suppl_2. (1 July 2009), pp. W68-76. by Michael Hackenberg, Martin Sturm, David Langenberger, Juan M. Falcon-Perez, Ana M. Aransay posted to mirna by fishtank on 2009-07-10 18:09:07 as along with 11 people and 2 groups druvus heliopais orzenil tonamswish dswan natstreet guhjy fenghezi pengchy ealloza daforerog microRNA Bioinformatics
	Proteomic Strategies for Analyzing Body Fluids [My Copy] Proteomics of Human Body Fluids (2007), pp. 3-30. by Sung-Min Ahn, Richard J. Simpson posted to biomarkers proteomics proteomics_review by fishtank on 2009-07-09 22:54:28 as
	The modal distribution of protein isoelectric points reflects amino acid properties rather than sequence evolution. [My Copy] Proteomics, Vol. 4, No. 4. (April 2004), pp. 943-949. by G. F. Weiller, G. Caraux, N. Sylvester posted to proteomics proteomics_fractionation by fishtank on 2009-07-09 22:23:57 as
	The Optimized Conditions of Two Dimensional Polyacrylamide Gel Electrophoresis for Serum Proteomics [My Copy] Journal of Proteomics & Bioinformatics, Vol. 01, No. 05. (13 August 2008), pp. 250-257. by Fengming Gong, Shufang Liang, Chunmei He, et al.Guobo Shen, Yuhuan Xu, Zhizhong Xu, Zhenling Wang, Xiaohua Wu, Yuquan Wei posted to proteomics proteomics_fractionation by fishtank on 2009-07-09 22:22:34 as
	Shotgun Proteomic Analysis of Cerebrospinal Fluid Using Off-Gel Electrophoresis as the First-Dimension Separation [My Copy] Journal of Proteome Research, Vol. 7, No. 10. (3 October 2008), pp. 4577-4584. by Lashanda N. Waller, Kevin Shores, Daniel R. Knapp posted to proteomics proteomics_fractionation by fishtank on 2009-07-07 19:07:11 as along with 1 person brianb
	Mass spectrometry in clinical proteomics - from the present to the future [My Copy] PROTEOMICS - CLINICAL APPLICATIONS, Vol. 3, No. 1. (2009), pp. 6-17. by Magnus Palmblad, Ali Tiss, Rainer Cramer posted to biomarkers proteomics_review by fishtank on 2009-07-06 18:22:00 as
	Batch Anion Exchange Separation: A Prefractionation Technique for Proteome Research and Its Applications on In Vivo Cancer Samples [My Copy] (2005) by Ziad J. Sahab posted to proteomics_fractionation by fishtank on 2009-07-02 21:51:04 as
	Post-acquisition ETD spectral processing for increased peptide identifications. [My Copy] Journal of the American Society for Mass Spectrometry, Vol. 20, No. 8. (14 August 2009), pp. 1435-1440. by David M. Good, Craig D. Wenger, Graeme C. McAlister, Dina L. Bai, Donald F. Hunt, Joshua J. Coon posted to proteomics_etd proteomics_fragmentation by fishtank on 2009-07-02 00:52:49 as along with 1 person brianb
	Glycoproteomics: Past, present and future [My Copy] FEBS Letters, Vol. 583, No. 11. (05 June 2009), pp. 1728-1735. by B. Tissot posted to glycoproteomics proteomics_modifications by fishtank on 2009-06-29 17:41:24 as
	Liquid Chromatography/Mass Spectrometry (LC/MS)-Based Glycoproteomics Technologies for Cancer Biomarker Discovery [My Copy] Clinical Proteomics, Vol. 4, No. 1. (1 June 2008), pp. 14-24. by Hiroyuki Kaji, Toshiaki Isobe posted to glycoproteomics proteomics_modifications by fishtank on 2009-06-29 17:35:47 as
	A practical guide to analytical method validation, including measurement uncertainty and accuracy profiles [My Copy] TrAC Trends in Analytical Chemistry, Vol. 26, No. 3. (March 2007), pp. 227-238. by A. Gustavogonzalez, M. Angelesherrador posted to proteomics_mrm statistics by fishtank on 2009-06-25 22:45:15 as
	Multiple Reaction Monitoring-based, Multiplexed, Absolute Quantitation of 45 Proteins in Human Plasma [My Copy] Mol Cell Proteomics, Vol. 8, No. 8. (1 August 2009), pp. 1860-1877. by Michael A. Kuzyk, Derek Smith, Juncong Yang, et al.Tyra J. Cross, Angela M. Jackson, Darryl B. Hardie, N. Leigh Anderson, Christoph H. Borchers posted to proteomics proteomics_mrm by fishtank on 2009-06-23 20:49:19 as along with 3 people guhjy williamgunn brianb
	FDR made easy in differential feature discovery and correlation analyses [My Copy] Bioinformatics, Vol. 25, No. 11. (1 June 2009), pp. 1461-1462. by Xuefeng B. Ling, Harvey Cohen, Joseph Jin, Irwin Lau, James Schilling posted to proteomics proteomics_identification statistics by fishtank on 2009-06-23 20:34:44 as along with 5 people rdiaz brianb nuin idonaldson guhjy
	Comparison of Different Signal Thresholds on Data Dependent Sampling in Orbitrap and LTQ Mass Spectrometry for the Identification of Peptides and Proteins in Complex Mixtures. [My Copy] Journal of the American Society for Mass Spectrometry (18 April 2009) by Catherine C L C. Wong, Daniel Cociorva, John D D. Venable, Tao Xu, John R R. Yates posted to proteomics proteomics_identification by fishtank on 2009-06-23 20:32:35 as along with 1 person brianb
	Critical Evaluation of Product Ion Selection and Spectral Correlation Analysis for Biomarker Screening Using Targeted Peptide Multiple Reaction Monitoring [My Copy] Clinical Proteomics by Jian Liu, Johannes Hewel, Vincent Fong, Michelle Chan-Shen-Yue, Andrew Emili posted to proteomics_mrm by fishtank on 2009-06-11 18:05:23 as
	Multiple products monitoring as a robust approach for Peptide quantification. [My Copy] Journal of proteome research, Vol. 8, No. 7. (July 2009), pp. 3625-3632. by Je-Hyun H. Baek, Hokeun Kim, Byunghee Shin, Myeong-Hee H. Yu posted to proteomics proteomics_mrm by fishtank on 2009-06-11 17:59:44 as along with 1 person guhjy
	Calculation of the isoelectric point of tryptic peptides in the pH 3.5-4.5 range based on adjacent amino acid effects. [My Copy] Electrophoresis, Vol. 29, No. 13. (10 July 2008), pp. 2768-2778. by Benjamin J J. Cargile, Joel R R. Sevinsky, Amal S S. Essader, Jerry P P. Eu, James L L. Stephenson posted to proteomics_fractionation by fishtank on 2009-06-04 20:11:27 as along with 1 person brianb
	Immobilized pH gradients as a first dimension in shotgun proteomics and analysis of the accuracy of p<B><I>I</I></B> predictability of peptides [My Copy] ELECTROPHORESIS, Vol. 25, No. 6. (2004), pp. 936-945. by Benjamin J. Cargile, Dana L. Talley, James L. Stephenson posted to proteomics_fractionation by fishtank on 2009-06-04 17:53:01 as
	Improved proteome coverage by using iTRAQ labelling and peptide OFFGEL fractionation [My Copy] Proteome Science, Vol. 6 (13 October 2008), 27. by Emilie Ernoult, Erick Gamelin, Catherine Guette posted to proteomics_fractionation by fishtank on 2009-06-03 19:40:03 as
	2-DE with IPGs [My Copy] ELECTROPHORESIS, Vol. 9999, No. 9999. (2009), NA. by Angelika Görg, Oliver Drews, Carsten Lück, Florian Weiland, Walter Weiss posted to proteomics_fractionation by fishtank on 2009-06-03 19:37:57 as

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mirna	59
proteomics	37
book	33
am1	20
proteomics_fractionation	16
proteomics_mrm	15
proteomics_review	15
am1_enzymes	12
fba	10
targeted_proteomics	10
enzyme_optimization	9
biomarkers	8
kinetic_simulation-review	8
proteomics_identification	8
scale-free	8
proteomics_modifications	7
statistics	7
disease	6
kinetic_simulation	6
metabolic-review	6
proteomics_fragmentation	6
systems_biology	6
rate_equation	5
biomarker	4
cancer	4
ecoli_ppp	4
expt-technique	4
lipidomics	4
metabolic	4
proteomics_repositories	4
spectral_matching	4
biochemical_pathway	3
diabetes	3
e-cell	3
evolution	3
flux_regulation	3
glycoproteomics	3
mca	3
modular	3
physiology	3
programming	3
rate_constants	3
robustness	3
to_be_classified	3
transcription-network	3
c13_labeling	2
clustering	2
cooperation	2
enzyme	2
gene_expression	2
lecture-notes	2
metabolic-engineering-review	2
methylotrophs	2
microarray	2
modeling	2
mrmaid	2
principles	2
stochastic	2
stress_response	2
yeast	2
am1_mutant	1
biography	1
bistable	1
bow-ties	1
c	1
cancer_biology	1
chip-chip	1
database	1
design_principles	1
developmental_biology	1
encode	1
futile_cycle	1
galactose	1
gene_regulation	1
human_genome	1
human_metabolism	1
image_registration	1
mathematica	1
multicellular	1
myocardial	1
neuroscience-review	1
opinion	1
oscillations	1
presentation	1
proteins_interactions	1
proteomics_data_analysis	1
proteomics_etd	1
proteomics_genetics	1
proteomics_software	1
r	1
review	1
sas	1
secretion	1
signaling	1
visualization	1

fishtank's library 334 articles Export

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