fjc1's md [23 articles] Export

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	Molecular simulation of the effects of alcohols on peptide structure. [My Copy] Biopolymers, Vol. 49, No. 7. (June 1999), pp. 635-645. by D. S. Dwyer posted to alcohol md peptide structure by fjc1 on 2005-09-20 12:25:58 as
	Helix bending in alamethicin: molecular dynamics simulations and amide hydrogen exchange in methanol. [My Copy] Biophys J, Vol. 72, No. 6. (June 1997), pp. 2490-2495. by N. Gibbs, R. B. Sessions, P. B. Williams, C. E. Dempsey posted to alamethicin bending helix md methanol by fjc1 on 2005-09-20 12:07:42 as
	Conformation-Function Relationships for Substance-P [My Copy] Bioorganicheskaya Khimiya, Vol. 7, No. 5. (1981), pp. 645-654. by G. V. Nikiforovich, Y. Y. Balodis, G. I. Chipens posted to bibtex-import conformation md substance_p by fjc1 on 2005-09-19 14:13:43 as
	Comparison of Conformations of Bradykinin and Igercin Molecules [My Copy] Bioorganicheskaya Khimiya, Vol. 14, No. 3. (1988), pp. 308-312. by G. V. Nikiforovich, J. J. Balodis, G. I. Chipens posted to bibtex-import bradykinin conformation md by fjc1 on 2005-09-19 14:07:03 as
	Competing interactions contributing to alpha-helical stability in aqueous solution. [My Copy] Protein Sci, Vol. 4, No. 4. (April 1995), pp. 603-612. by M. J. Bodkin, J. M. Goodfellow posted to cd conformation helix md peptide by fjc1 on 2005-09-16 23:18:55 as
	NMR and molecular dynamics studies of tachykinins: conformation of substance P fragment 4-11. [My Copy] J Biomol Struct Dyn, Vol. 16, No. 3. (December 1998), pp. 747-755. by E. Coutinho, S. Kamath, A. Saran, S. Srivastava posted to conformation md nmr substance_p by fjc1 on 2005-09-16 14:18:05 as
	Molecular dynamics study of substance P peptides in a biphasic membrane mimic. [My Copy] Biophys J, Vol. 76, No. 3. (March 1999), pp. 1199-1212. by T. Wymore, T. C. Wong posted to md membrane sds substance_p by fjc1 on 2005-09-16 14:16:03 as
	Molecular dynamics study of substance P peptides partitioned in a sodium dodecylsulfate micelle. [My Copy] Biophys J, Vol. 76, No. 3. (March 1999), pp. 1213-1227. by T. Wymore, T. C. Wong posted to md micelle sds substance_p by fjc1 on 2005-09-16 14:15:26 as along with 1 person softsimu
	AMBER 5 [My Copy] (1997) by D. A. Case, D. A. Pearlman, J. W. Cadwell, et al.T. E. Cheatham, W. S. Ross, C. L. Simmerling, T. A. Darden, K. M. Merz, R. V. Stanton, A. L. Cheng, J. J. Vincent, M. Crowley, D. M. Ferguson, R. J. Radmer, G. L. Seibel, U. C. Singh, P. K. Weiner, P. A. Kollman edited by University posted to amber md by fjc1 on 2005-09-16 09:43:38 as
	NMR and molecular modeling investigations of the neuropeptide substance P in the presence of 15 mM sodium dodecyl sulfate micelles. [My Copy] Biopolymers, Vol. 34, No. 11. (November 1994), pp. 1449-1462. by J. K. Young, C. Anklin, R. P. Hicks posted to md nmr sds substance_p by fjc1 on 2005-09-15 14:54:41 as along with 1 person softsimu
	Helix nucleation kinetics from molecular simulations in explicit solvent. [My Copy] Proteins, Vol. 42, No. 1. (1 January 2001), pp. 77-84. by G. Hummer, A. E. García, S. Garde posted to explicit helix md speed by fjc1 on 2005-09-15 10:56:12 as
	Absolute comparison of simulated and experimental protein-folding dynamics [My Copy] Nature, Vol. 420, No. 6911. (20 October 2002), pp. 102-106. by Christopher D. Snow, Houbi Nguyen, Vijay S. Pande, Martin Gruebele posted to experimental folding md protein by fjc1 on 2005-09-14 16:48:29 as along with 3 people Diego_Prada doktornoe samjlord
	Reversible peptide folding in solution by molecular dynamics simulation. [My Copy] J Mol Biol, Vol. 280, No. 5. (31 July 1998), pp. 925-932. by X. Daura, B. Jaun, D. Seebach, W. F. van Gunsteren, A. E. Mark posted to folding md peptide reversible by fjc1 on 2005-09-14 16:28:50 as
	Folding-unfolding thermodynamics of a beta-heptapeptide from equilibrium simulations. [My Copy] Proteins, Vol. 34, No. 3. (15 February 1999), pp. 269-280. by X. Daura, W. F. van Gunsteren, A. E. Mark posted to beta-heptapeptide folding md by fjc1 on 2005-09-14 16:28:03 as along with 2 people and 1 group A_Coletta_Thesis oteri Structural Biology Group TorVergata
	The beta-peptide hairpin in solution: conformational study of a beta-hexapeptide in methanol by NMR spectroscopy and MD simulation. [My Copy] J Am Chem Soc, Vol. 123, No. 10. (14 March 2001), pp. 2393-2404. by X. Daura, K. Gademann, H. Schäfer, B. Jaun, D. Seebach, W. F. van Gunsteren posted to beta-peptide folding md methanol nmr by fjc1 on 2005-09-14 16:25:04 as along with 1 person allmensch
	The protein folding 'speed limit'. [My Copy] Current opinion in structural biology, Vol. 14, No. 1. (February 2004), pp. 76-88. by Jan Kubelka, James Hofrichter, William A. Eaton posted to folding md protein speed by fjc1 on 2005-09-14 16:08:43 as along with 6 people parnell svozil dgront choonpeng superpyrin yalexeev
	All-atom structure prediction and folding simulations of a stable protein. [My Copy] J Am Chem Soc, Vol. 124, No. 38. (25 September 2002), pp. 11258-11259. by C. Simmerling, B. Strockbine, A. E. Roitberg posted to folding md prediction by fjc1 on 2005-09-13 14:24:32 as along with 2 people bilab allmensch
	Folding Cooperativity in a Three-stranded beta-Sheet Model. [My Copy] J Mol Biol, Vol. 352, No. 2. (16 September 2005), pp. 370-381. by D. R. Roe, V. Hornak, C. Simmerling posted to folding md replica by fjc1 on 2005-09-13 14:14:13 as along with 1 person bilab
	Free-energy landscape of the villin headpiece in an all-atom force field. [My Copy] Structure (Camb), Vol. 13, No. 4. (April 2005), pp. 661-668. by T. Herges, W. Wenzel posted to folding free-energy md by fjc1 on 2005-09-08 15:22:41 as along with 2 people nigham Diego_Prada
	Folding is not required for bilayer insertion: replica exchange simulations of an alpha-helical peptide with an explicit lipid bilayer. [My Copy] Proteins, Vol. 59, No. 4. (1 June 2005), pp. 783-790. by H. Nymeyer, T. B. Woolf, A. E. Garcia posted to explicit folding md membrane by fjc1 on 2005-09-08 14:56:35 as
	MHC-peptide binding is assisted by bound water molecules. [My Copy] J Mol Biol, Vol. 338, No. 2. (23 April 2004), pp. 419-435. by P. M. Petrone, A. E. Garcia posted to binding entropy md water by fjc1 on 2005-09-08 09:19:52 as along with 3 people and 2 groups sobolevnrm ssomani jteyra baker-group structure-bii
	Simulation of the folding equilibrium of alpha-helical peptides: a comparison of the generalized Born approximation with explicit solvent. [My Copy] Proc Natl Acad Sci U S A, Vol. 100, No. 24. (25 November 2003), pp. 13934-13939. by H. Nymeyer, A. E. García posted to comparison explicit folding gb md peptide by fjc1 on 2005-09-08 09:05:55 as along with 2 people Diego_Prada RamuAnandakrishnan
	Peptide folding simulations. [My Copy] Current opinion in structural biology, Vol. 13, No. 2. (April 2003), pp. 168-174. by S. Gnanakaran, H. Nymeyer, J. Portman, K. Y. Sanbonmatsu, A. E. García posted to folding md peptide by fjc1 on 2005-09-08 08:58:41 as along with 3 people flbarroso andreasauerwein allmensch

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md	23
helix	18
substance_p	16
conformation	15
folding	14
nmr	12
bibtex-import	11
cd	9
water	9
protein	6
tfe	6
peptide	6
alcohol	4
sds	4
capping	4
propensity	3
explicit	3
methanol	3
free_acid	2
comment	2
dmso	2
review	2
speed	2
conformational_analysis	2
alpha	2
stability	2
membrane	2
stereochemical_code	2
310	1
free-energy	1
termination	1
micelle	1
gpcr	1
shift	1
signal	1
gb	1
bending	1
induction	1
beta_amyloid	1
chemical	1
replica	1
qm	1
glycine	1
amber	1
modelling	1
sustance_p	1
binding	1
synthesis	1
determination	1
experimental	1
bradykinin	1
gaussian	1
raman	1
proline	1
beta-peptide	1
stop	1
ir	1
comparison	1
clasico	1
beta	1
alamethicin	1
structure	1
thesis	1
prediction	1
corcho	1
clusterit	1
entropy	1
conversion	1
activity	1
beta-heptapeptide	1
liposomes	1
reversible	1

fjc1's md [23 articles] Export

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