flbarroso's bioinformatics [129 articles] Export Sort

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	BioDrugScreen: a computational drug design resource for ranking molecules docked to the human proteome [My Copy] Nucl. Acids Res., Vol. 38, No. suppl_1. (1 January 2010), pp. D765-773. by Liwei Li, Khuchtumur Bum-Erdene, Peter H. Baenziger, et al.Joshua J. Rosen, Jamison R. Hemmert, Joy A. Nellis, Marlon E. Pierce, Samy O. Meroueh posted to drug-design bioinformatics by flbarroso on 2009-12-28 00:02:40 as along with 1 person aheilbut
	Inferred Biomolecular Interaction Server--a web server to analyze and predict protein interacting partners and binding sites [My Copy] Nucl. Acids Res., Vol. 38, No. suppl_1. (1 January 2010), pp. D518-524. by Benjamin A. Shoemaker, Dachuan Zhang, Ratna R. Thangudu, et al.Manoj Tyagi, Jessica H. Fong, Aron Marchler-Bauer, Stephen H. Bryant, Thomas Madej, Anna R. Panchenko posted to database complexation bioinformatics binding by flbarroso on 2009-12-27 23:59:11 as
	PDBselect 1992-2009 and PDBfilter-select [My Copy] Nucl. Acids Res., Vol. 38, No. suppl_1. (1 January 2010), pp. D318-319. by Sven Griep, Uwe Hobohm posted to protein database bioinformatics by flbarroso on 2009-12-27 23:58:02 as
	PDBe: Protein Data Bank in Europe [My Copy] Nucl. Acids Res., Vol. 38, No. suppl_1. (1 January 2010), pp. D308-317. by S. Velankar, C. Best, B. Beuth, et al.C. H. Boutselakis, N. Cobley, A. W. Sousa Da Silva, D. Dimitropoulos, A. Golovin, M. Hirshberg, M. John, E. B. Krissinel, R. Newman, T. Oldfield, A. Pajon, C. J. Penkett, J. Pineda-Castillo, G. Sahni, S. Sen, R. Slowley, A. Suarez-Uruena, J. Swaminathan, G. van Ginkel, W. F. Vranken, K. Henrick, G. J. Kleywegt posted to protein database bioinformatics by flbarroso on 2009-12-27 23:57:44 as along with 3 people and 1 group richardbickerton dullhunk walshtp Journal picks
	Gene3D: merging structure and function for a Thousand genomes. [My Copy] Nucleic acids research, Vol. 38, No. Database issue. (1 January 2010), pp. D296-300. by Jonathan Lees, Corin Yeats, Oliver Redfern, Andrew Clegg, Christine Orengo posted to protein database bioinformatics by flbarroso on 2009-12-27 23:57:28 as along with 1 person and 1 group CorinYeats Orengo Group Journal Picks
	MEROPS: the peptidase database [My Copy] Nucl. Acids Res., Vol. 38, No. suppl_1. (1 January 2010), pp. D227-233. by Neil D. Rawlings, Alan J. Barrett, Alex Bateman posted to peptide database bioinformatics by flbarroso on 2009-12-27 23:56:38 as
	The Pfam protein families database [My Copy] Nucl. Acids Res., Vol. 38, No. suppl_1. (1 January 2010), pp. D211-222. by Robert D. Finn, Jaina Mistry, John Tate, et al.Penny Coggill, Andreas Heger, Joanne E. Pollington, O. Luke Gavin, Prasad Gunasekaran, Goran Ceric, Kristoffer Forslund, Liisa Holm, Erik L. L. Sonnhammer, Sean R. Eddy, Alex Bateman posted to protein database bioinformatics by flbarroso on 2009-12-27 23:56:03 as along with 2 people sobolevnrm neils
	Protein Geometry Database: a flexible engine to explore backbone conformations and their relationships to covalent geometry [My Copy] Nucl. Acids Res., Vol. 38, No. suppl_1. (1 January 2010), pp. D320-325. by Donald S. Berkholz, Peter B. Krenesky, John R. Davidson, P. Andrew Karplus posted to protein database bioinformatics by flbarroso on 2009-12-27 23:52:38 as
	3D-footprint: a database for the structural analysis of protein-DNA complexes [My Copy] Nucl. Acids Res., Vol. 38, No. suppl_1. (1 January 2010), pp. D91-97. by Bruno Contreras-Moreira posted to protein-dna database complexation bioinformatics by flbarroso on 2009-12-27 23:50:22 as along with 1 person brunocontreras
	NBRP databases: databases of biological resources in Japan [My Copy] Nucl. Acids Res., Vol. 38, No. suppl_1. (1 January 2010), pp. D26-32. by Yukiko Yamazaki, Ryo Akashi, Yutaka Banno, et al.Takashi Endo, Hiroshi Ezura, Kaoru Fukami-Kobayashi, Kazuo Inaba, Tadashi Isa, Katsuhiko Kamei, Fumie Kasai, Masatomo Kobayashi, Nori Kurata, Makoto Kusaba, Tetsuro Matuzawa, Shohei Mitani, Taro Nakamura, Yukio Nakamura, Norio Nakatsuji, Kiyoshi Naruse, Hironori Niki, Eiji Nitasaka, Yuichi Obata, Hitoshi Okamoto, Moriya Okuma, Kazuhiro Sato, Tadao Serikawa, Toshihiko Shiroishi, Hideaki Sugawara, Hideko Urushibara, Masatoshi Yamamoto, Yoshio Yaoita, Atsushi Yoshiki, Yuji Kohara posted to database bioinformatics by flbarroso on 2009-12-27 23:49:42 as along with 1 person tprpip
	The European Bioinformatics Institute's data resources [My Copy] Nucl. Acids Res., Vol. 38, No. suppl_1. (1 January 2010), pp. D17-25. by Catherine Brooksbank, Graham Cameron, Janet Thornton posted to database bioinformatics by flbarroso on 2009-12-27 23:49:16 as
	Database resources of the National Center for Biotechnology Information [My Copy] Nucl. Acids Res., Vol. 38, No. suppl_1. (1 January 2010), pp. D5-16. by Eric W. Sayers, Tanya Barrett, Dennis A. Benson, et al.Evan Bolton, Stephen H. Bryant, Kathi Canese, Vyacheslav Chetvernin, Deanna M. Church, Michael DiCuccio, Scott Federhen, Michael Feolo, Lewis Y. Geer, Wolfgang Helmberg, Yuri Kapustin, David Landsman, David J. Lipman, Zhiyong Lu, Thomas L. Madden, Tom Madej, Donna R. Maglott, Aron Marchler-Bauer, Vadim Miller, Ilene Mizrachi, James Ostell, Anna Panchenko, Kim D. Pruitt, Gregory D. Schuler, Edwin Sequeira, Stephen T. Sherry, Martin Shumway, Karl Sirotkin, Douglas Slotta, Alexandre Souvorov, Grigory Starchenko, Tatiana A. Tatusova, Lukas Wagner, Yanli Wang, W. John Wilbur, Eugene Yaschenko, Jian Ye posted to database bioinformatics by flbarroso on 2009-12-27 23:49:01 as along with 2 people and 1 group arthegall Mi-Seon Biobank Database
	The Biomolecular Interaction Network Database and related tools 2005 update [My Copy] Nucl. Acids Res., Vol. 33, No. suppl_1. (1 January 2005), pp. D418-424. by C. Alfarano, C. E. Andrade, K. Anthony, et al.N. Bahroos, M. Bajec, K. Bantoft, D. Betel, B. Bobechko, K. Boutilier, E. Burgess, K. Buzadzija, R. Cavero, C. D'Abreo, I. Donaldson, D. Dorairajoo, M. J. Dumontier, M. R. Dumontier, V. Earles, R. Farrall, H. Feldman, E. Garderman, Y. Gong, R. Gonzaga, V. Grytsan, E. Gryz, V. Gu, E. Haldorsen, A. Halupa, R. Haw, A. Hrvojic, L. Hurrell, R. Isserlin, F. Jack, F. Juma, A. Khan, T. Kon, S. Konopinsky, V. Le, E. Lee, S. Ling, M. Magidin, J. Moniakis, J. Montojo, S. Moore, B. Muskat, I. Ng, J. P. Paraiso, B. Parker, G. Pintilie, R. Pirone, J. J. Salama, S. Sgro, T. Shan, Y. Shu, J. Siew, D. Skinner, K. Snyder, R. Stasiuk, D. Strumpf, B. Tuekam, S. Tao, Z. Wang, M. White, R. Willis, C. Wolting, S. Wong, A. Wrong, C. Xin, R. Yao, B. Yates, S. Zhang, K. Zheng, T. Pawson, B. F. F. Ouellette, C. W. V. Hogue posted to protein-protein bioinformatics by flbarroso on 2009-11-10 16:49:30 as
	Identification of dynamic structural domains in proteins, analysis of local bond flexibility and application for interpretation of NMR experiments [My Copy] Molecular Simulation (2009) by Maria Stepanova posted to protein_g prion_proteins nmr_experiments nmr md flexibility drug-design bioinformatics by flbarroso on 2009-09-26 05:01:07 as
	Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima [My Copy] Science, Vol. 325, No. 5947. (18 September 2009), pp. 1544-1549. by Ying Zhang, Ines Thiele, Dana Weekes, et al.Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley M. Deacon, John Wooley, Scott A. Lesley, Ian A. Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik posted to system_biology structural_genomics bioinformatics by flbarroso on 2009-09-24 13:35:49 as along with 15 people freesci robfsouza michaelbarton venancio schwartzjmc apocapoc eehsanipour riffraff reyez TRHvidsten daveGerrard zwang pablocarb phoenixzxl roys
	Multi-level learning: improving the prediction of protein, domain and residue interactions by allowing information flow between levels [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (2009), 241. by Kevin Yip, Philip Kim, Drew McDermott, Mark Gerstein posted to protein-protein bioinformatics by flbarroso on 2009-09-14 13:16:54 as along with 9 people and 1 group richardbickerton zwang jago gwallau installe barriot kshameer peteruetz phoenixzxl Simulation of operations and interactions
	CHARMM-GUI: A web-based graphical user interface for CHARMM [My Copy] Journal of Computational Chemistry, Vol. 29, No. 11. (2008), pp. 1859-1865. by Sunhwan Jo, Taehoon Kim, Vidyashankara G. Iyer, Wonpil Im posted to molecular_dynamics_package md bioinformatics by flbarroso on 2009-09-12 23:32:48 as along with 1 person middledomain
	Mathematical Biology Education: Beyond Calculus [My Copy] Science, Vol. 325, No. 5940. (31 July 2009), pp. 542-543. by Raina Robeva, Reinhard Laubenbacher posted to bioinformatics by flbarroso on 2009-09-09 17:38:14 as along with 4 people and 1 group nicholasflann ajitkumar22 dlobo Borelli GEB
	Computing Has Changed Biology--Biology Education Must Catch Up [My Copy] Science, Vol. 325, No. 5940. (31 July 2009), pp. 541-542. by Pavel Pevzner, Ron Shamir posted to bioinformatics by flbarroso on 2009-09-09 17:37:08 as along with 7 people remoteFuture ptrobajo rodrigofaccioli lmichan allysonlister dinnes stevenbedrick
	Structural genomics: keeping up with expanding knowledge of the protein universe [My Copy] Current Opinion in Structural Biology, Vol. 17, No. 3. (June 2007), pp. 347-353. by M. Grabowski, A. Joachimiak, Z. Otwinowski, W. Minor posted to protein genomics bioinformatics by flbarroso on 2009-08-16 20:34:11 as
	Outcome of a Workshop on Archiving Structural Models of Biological Macromolecules [My Copy] Structure, Vol. 14, No. 8. (August 2006), pp. 1211-1217. by Helen M. Berman, Stephen K. Burley, Wah Chiu, et al.Andrej Sali, Alexei Adzhubei, Philip E. Bourne, Stephen H. Bryant, Dunbrack Jr, Krzysztof Fidelis, Joachim Frank posted to protein bioinformatics by flbarroso on 2009-08-16 20:26:02 as
	Ligand Depot: a data warehouse for ligands bound to macromolecules [My Copy] Bioinformatics, Vol. 20, No. 13. (1 September 2004), pp. 2153-2155. by Zukang Feng, Li Chen, Himabindu Maddula, et al.Ozgur Akcan, Rose Oughtred, Helen M. Berman, John Westbrook posted to protein drug-design database bioinformatics by flbarroso on 2009-08-16 20:25:28 as along with 5 people reyez BragilMassoud nachtalp bicko nickolay
	TargetDB: a target registration database for structural genomics projects [My Copy] Bioinformatics, Vol. 20, No. 16. (1 November 2004), pp. 2860-2862. by Li Chen, Rose Oughtred, Helen M. Berman, John Westbrook posted to genomics database bioinformatics by flbarroso on 2009-08-16 20:24:51 as
	The RCSB Protein Data Bank: a redesigned query system and relational database based on the mmCIF schema [My Copy] Nucl. Acids Res., Vol. 33, No. suppl_1. (1 January 2005), pp. D233-237. by Nita Deshpande, Kenneth J. Addess, Wolfgang F. Bluhm, et al.Jeffrey C. Merino-Ott, Wayne Townsend-Merino, Qing Zhang, Charlie Knezevich, Lie Xie, Li Chen, Zukang Feng, Rachel Kramer Green, Judith L. Flippen-Anderson, John Westbrook, Helen M. Berman, Philip E. Bourne posted to protein database bioinformatics by flbarroso on 2009-08-16 20:24:03 as along with 1 person kumar_physics
	FlexServ: an integrated tool for the analysis of protein flexibility [My Copy] Bioinformatics, Vol. 25, No. 13. (1 July 2009), pp. 1709-1710. by Jordi Camps, Oliver Carrillo, Agusti Emperador, et al.Laura Orellana, Adam Hospital, Manuel Rueda, Damjan Cicin-Sain, Marco D'Abramo, Josep L. Gelpi, Modesto Orozco posted to bioinformatics flexibility protein by flbarroso on 2009-07-21 19:18:29 as along with 2 people and 1 group sobolevnrm kshameer structural_bioinformatics
	PDBcal: a comprehensive dataset for receptor-ligand interactions with three-dimensional structures and binding thermodynamics from isothermal titration calorimetry. [My Copy] Chemical biology & drug design, Vol. 71, No. 6. (June 2008), pp. 529-532. by L. Li, J. J. Dantzer, J. Nowacki, B. J. O'Callaghan, S. O. Meroueh posted to binding bioinformatics calorimetry database thermodynamics titration by flbarroso on 2009-07-21 19:07:31 as along with 3 people massivemayhem higueruelo kintoki
	Validation of protein crystal structures [My Copy] Acta Crystallographica Section D, Vol. 56, No. 3. (Mar 2000), pp. 249-265. by Gerard J. Kleywegt posted to bioinformatics protein reviews validation_protein by flbarroso on 2009-07-21 15:36:42 as
	The Protein Data Bank [My Copy] Nucl. Acids Res., Vol. 28, No. 1. (1 January 2000), pp. 235-242. by Helen M. Berman, John Westbrook, Zukang Feng, et al.Gary Gilliland, T. N. Bhat, Helge Weissig, Ilya N. Shindyalov, Philip E. Bourne posted to bioinformatics database protein by flbarroso on 2009-07-21 15:28:58 as along with 47 people and 5 groups loison ubcg08l trishul krapnik barmak7282 viktor21614 badi ucbcjbm TLVincent maria_hauser Martin8223 tomjad Diego_Prada Taguan oceanwind dsmueller fisherp semin MarcoAlvarez kumar_physics LamBras RamuAnandakrishnan nlapalu reyez nigham lillekatt thaliana dimka kuhn jwm vavi bicko itmeson dgront caporaso condon aengisch debatebob massivemayhem gisle girschick selrac tji higueruelo boris_aguilar sebk timg References for 3DSim paper Radiation_Damage Stressosome biomedical-nlp beta
	A toolkit for computational molecular biology I: packing and unpacking of protein coordinate sets [My Copy] Journal of Molecular Graphics, Vol. 1, No. 4. (December 1983), pp. 118-121. by A. Lesk posted to bioinformatics protein by flbarroso on 2009-07-21 15:24:52 as
	The protein data bank: A computer-based archival file for macromolecular structures [My Copy] Archives of Biochemistry and Biophysics, Vol. 185, No. 2. (30 January 1978), pp. 584-591. by F. Bernstein, T. Koetzle, G. Williams, et al.E. Meyerjr, M. Brice, J. Rodgers, O. Kennard, T. Shimanouchi, M. Tasumi posted to bioinformatics database protein by flbarroso on 2009-07-21 15:22:20 as
	Dali: a network tool for protein structure comparison [My Copy] Trends in Biochemical Sciences, Vol. 20, No. 11. (November 1995), pp. 478-480. by L. Holm posted to bioinformatics protein by flbarroso on 2009-07-21 15:19:36 as along with 1 person AbnerCYH
	Validation of protein models from Cα coordinates alone [My Copy] Journal of Molecular Biology, Vol. 273, No. 2. (24 October 1997), pp. 371-376. by G. Kleywegt posted to bioinformatics protein validation_protein by flbarroso on 2009-07-21 15:13:26 as
	eF-site and PDBjViewer: database and viewer for protein functional sites. [My Copy] Bioinformatics (Oxford, England), Vol. 20, No. 8. (22 May 2004), pp. 1329-1330. by K. Kinoshita, H. Nakamura posted to bioinformatics database by flbarroso on 2009-07-19 19:35:47 as along with 1 person dullhunk
	SuperLigands - a database of ligand structures derived from the Protein Data Bank. [My Copy] BMC bioinformatics [electronic resource]. , Vol. 6, No. 1. (19 May 2005) by E. Michalsky, M. Dunkel, A. Goede, R. Preissner posted to binding bioinformatics database protein-drug by flbarroso on 2009-07-19 19:34:54 as along with 3 people mijam kuhn ucbcjbm
	Biowep: a workflow enactment portal for bioinformatics applications. [My Copy] BMC bioinformatics, Vol. 8 Suppl 1 (2007) by P. Romano, E. Bartocci, G. Bertolini, et al.F. De Paoli, D. Marra, G. Mauri, E. Merelli, L. Milanesi posted to bioinformatics by flbarroso on 2009-07-19 19:34:17 as along with 7 people and 1 group pekrau Effie daforerog druvus guhjy moborg dullhunk NaCTeM
	Evolution of web services in bioinformatics. [My Copy] Briefings in bioinformatics, Vol. 6, No. 2. (1 June 2005), pp. 178-188. by Pieter B. Neerincx, Jack A. Leunissen posted to bioinformatics by flbarroso on 2009-07-19 19:33:40 as along with 12 people and 2 groups artaban421 Thaverkamp druvus lmichan niallhaslam daforerog GLobbestael yas moborg incovoma mroos guhjy T_lab AID
	PreBI: prediction of biological interfaces of proteins in crystals. [My Copy] Nucleic acids research, Vol. 34, No. Web Server issue. (1 July 2006) by Y. Tsuchiya, K. Kinoshita, N. Ito, H. Nakamura posted to bioinformatics protein-protein by flbarroso on 2009-07-19 19:33:18 as
	Recent developments of the chemistry development kit (CDK) - an open-source java library for chemo- and bioinformatics. [My Copy] Current pharmaceutical design, Vol. 12, No. 17. (2006), pp. 2111-2120. by C. Steinbeck, C. Hoppe, S. Kuhn, M. Floris, R. Guha, E. L. Willighagen posted to bioinformatics by flbarroso on 2009-07-19 19:32:42 as along with 3 people kuhn egonw noby
	eF-seek: prediction of the functional sites of proteins by searching for similar electrostatic potential and molecular surface shape. [My Copy] Nucleic acids research, Vol. 35, No. Web Server issue. (1 July 2007) by K. Kinoshita, Y. Murakami, H. Nakamura posted to binding bioinformatics electrostatics by flbarroso on 2009-07-19 19:31:23 as along with 1 person tjimenez
	pKNOT: the protein KNOT web server. [My Copy] Nucleic acids research, Vol. 35, No. Web Server issue. (July 2007) by Y. L. Lai, S. C. Yen, S. H. Yu, J. K. Hwang posted to bioinformatics protein by flbarroso on 2009-07-19 19:30:40 as
	PIBASE: a comprehensive database of structurally defined protein interfaces. [My Copy] Bioinformatics (Oxford, England), Vol. 21, No. 9. (1 May 2005), pp. 1901-1907. by Fred P. Davis, Andrej Sali posted to bioinformatics database protein-protein by flbarroso on 2009-07-19 19:14:14 as along with 2 people robfsouza zdai
	Realistic protein-protein association rates from a simple diffusional model neglecting long-range interactions, free energy barriers, and landscape ruggedness. [My Copy] Protein science : a publication of the Protein Society, Vol. 13, No. 6. (June 2004), pp. 1660-1669. by M. Schlosshauer, D. Baker posted to bioinformatics protein-protein by flbarroso on 2009-07-19 18:37:27 as along with 2 people welliegirl ras
	A Novel Proteomic Screen for Peptide-Protein Interactions [My Copy] J. Biol. Chem., Vol. 279, No. 11. (12 March 2004), pp. 10756-10764. by Waltraud X. Schulze, Matthias Mann posted to bioinformatics protein-peptide by flbarroso on 2009-07-19 05:00:08 as
	POLAR MAPPER: a computational tool for integrated visualization of protein interaction networks and mRNA expression data. [My Copy] Journal of the Royal Society, Interface / the Royal Society, Vol. 6, No. 39. (6 October 2009), pp. 881-896. by Joana P. Gonçalves, Mário Grãos, André X. Valente posted to bioinformatics protein-protein by flbarroso on 2009-07-19 04:56:36 as along with 1 person guhjy
	Progress and challenges in predicting protein-protein interaction sites [My Copy] Brief Bioinform, Vol. 10, No. 3. (1 May 2009), pp. 233-246. by Iakes Ezkurdia, Lisa Bartoli, Piero Fariselli, Rita Casadio, Alfonso Valencia, Michael L. Tress posted to bioinformatics prediction protein-protein by flbarroso on 2009-07-19 04:46:00 as along with 9 people and 1 group biomcgary nanonan apaydin marti neils reyez barry renatomilani iakes McCammon
	Protein–protein interaction maps: a lead towards cellular functions [My Copy] Trends in Genetics, Vol. 17, No. 6. (1 June 2001), pp. 346-352. by P. Legrain posted to bioinformatics protein-protein by flbarroso on 2009-07-19 04:34:23 as
	Bridging structural biology and genomics: assessing protein interaction data with known complexes [My Copy] Trends in Genetics, Vol. 18, No. 10. (1 October 2002), pp. 529-536. by A. Edwards posted to bioinformatics protein-protein system_biology by flbarroso on 2009-07-19 04:32:29 as along with 6 people and 1 group ubcg08l lfriedl wnpx reidy ruvido wilbur kdl
	Protein interaction databases [My Copy] Current Opinion in Biotechnology, Vol. 12, No. 4. (1 August 2001), pp. 334-339. by I. Xenarios posted to bioinformatics database protein-protein by flbarroso on 2009-07-19 04:31:47 as
	The Importance of Bottlenecks in Protein Networks: Correlation with Gene Essentiality and Expression Dynamics [My Copy] PLoS Comput Biol, Vol. 3, No. 4. (20 April 2007), e59. by Haiyuan Yu, Philip M. Kim, Emmett Sprecher, Valery Trifonov, Mark Gerstein posted to bioinformatics protein-protein system_biology by flbarroso on 2009-07-19 04:29:56 as along with 9 people lawraga shung shikin jiny jfr zwang Takayuki hryk carlk
	Information flow analysis of interactome networks. [My Copy] PLoS computational biology, Vol. 5, No. 4. (10 April 2009), e1000350. by Patrycja Vasilyev V. Missiuro, Kesheng Liu, Lihua Zou, et al.Brian C. Ross, Guoyan Zhao, Jun S. Liu, Hui Ge posted to bioinformatics protein-protein system_biology by flbarroso on 2009-07-19 04:29:12 as along with 19 people and 1 group lptolik jfr freesci peteruetz phoenixzxl robfsouza reyez VGreiff colmryan sobolevnrm hryk shikin dswan fgibson coela ddahlem mstumpf zwang friendpine baker-group

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electrostatics	458
protein-protein	235
protein	187
folding	178
bioinformatics	129
binding	116
md	116
beta-lactoglobulin	87
protein-polyelectrolyte	83
pb	74
drug-design	71
continnum	70
force-fields	66
database	62
applications	62
solvation	59
docking	56
lysozyme	56
free_energy	54
calcium-binding	52
water	50
pka	50
prediction	48
modeling	46
hydrophobicity	44
whey	39
ph	36
titration	35
polyelectrolytes	34
system_biology	32
albumin	32
mc	32
calmodulin	31
complexation	30
liquids	30
protein-surface	30
alfa-lactalbumin	30
chitosan	29
virial	28
aggregation	28
reviews	27
drug-delivery	26
dielectric	26
crystallization	25
coacervate	25
membrane	25
charge-regulation	24
simulation	24
electrophoresis	21
polarizable	21
born	21
colloids	20
peptide	20
amyloid	20
enzyme	19
rmc	18
milk	17
ion-binding	17
polymer	17
alzheimer	17
light-scattering	16
barnase	16
pectin	15
dna	15
nanoparticles	15
van-der-waals	14
cancer	14
microcapsules	14
lactoferrin	13
ionic-strength	13
hemoglobin	12
thrombin	12
barstar	12
qmmm	11
caseins	10
stability	10
sampling	10
solvent_accessible_surface	10
acacia	10
mc-sampling	10
lattice_models	10
antibody-antigen	10
like-charged	9
protein-drug	9
hirudin	9
channel	9
micelles	9
chromatography	9
evolutive	8
protein-peptide	8
entropy	8
calbindin	8
calorimetry	8
structural-changes	8
nmr	8
flexibility	7
hpmodel	7
strategic_planning	7
solubility	7
prion	6
soft_matter	6
pi	6
hiv	6
discontinuities	6
ph-effect	6
x-ray	6
pk	6
trypsin	6
protein-dna	6
double_layer	6
ion-pairs	6
actin	6
effective-potentials	6
hofmeister	5
patch	5
ribonuclease	5
thermodynamics	5
fluid	5
emulsions	5
homology	5
myosin	5
molecular_dynamics_package	5
activity_coefficients	5
immunoglobulin	5
osmotic	5
separation	5
intermolecular-forces	5
design	4
on-the-wrong-side	4
hamaker	4
nacl	4
concentration-effect	4
ca_chain_models	4
cytochrome	4
validation_protein	4
ovalbumin	4
ion-ion_correlation	4
dhodh	4
chymotrypsin	4
spectroscopy	4
protein_structure	3
genomics	3
similarity	3
widom	3
protein_families	3
debye-huckel	3
multiscale_modeling	3
lie	3
diseases	3
fluorescence	3
spectrometry	3
statistical_potentials	3
myoglobin	3
afm	3
biological_physics	3
chymotrypsinogen	3
nanostructure	3
ca	3
thrombomodulin	3
alignment	2
fatty-acids	2
non-electrostatic	2
bd	2
food	2
clays	2
sedimentation	2
influenza	2
ferritin	2
heparin	2
coarse-graining	2
protein-family	2
toxin	2
cholesterol	2
blood	2
zeta-potential	2
fibril	2
xanthan	2
igg	2
allostery	2
lectin	2
antioxidant	2
bacteria	2
nanotechnology	2
dvlo	2
sod	2
amorphous	2
gels	2
coarse_grain	2
nanotubes	2
brushes	2
hyaluronic	2
chromatin	2
oppositely-charged	2
thioredoxin	2
mineral	2
anesthetics	2
sir	2
chemistry2	2
precipitation	2
surface_area	1
protein_g	1
dissociation	1
paa	1
potential_energy	1
proteomics	1
interaction_forces	1
generalized	1
lattice_boltzmann	1
transferrin	1
dendrimer	1
surfaces	1
calcyclin	1
coagulation	1
electron-transfer	1
protease	1
lennard_jones	1
vaccines	1
fibroin	1
mean_field	1
tubulin	1
quantum_chemical	1
gama-globulin	1
history	1
dipolar_fluid	1
genomes	1
scattering	1
anemia	1
chelator	1
peg	1
collagen	1
histidines	1
transferases	1
ionic_liquids	1
lipid_bilayers	1
microscopic	1
tetracene	1
tanford-kirkwood	1
gel-filtration	1
gramicidin	1
p53	1
aot	1
fulleran	1
cements	1
zeolites	1
ab_initio	1
spectophotometry	1
antimicrobial	1
synechococcus	1
fasciculin	1
pectase	1
structural_genomics	1
bapta	1
pvs	1
crambin	1
microtubules	1
calspermin	1
percolation	1
multi-objective	1
prion_proteins	1
pollen	1
rnasea	1
alginate	1
proteome	1
turbidity	1
acetylcholinesterase	1
fructose	1
diabetes	1
trichosurin	1
tannins	1
counterion-condensation	1
parallelization	1
copper_proteins	1
ubiquitin	1
psoriasin	1
attractive_forces	1
histone	1
ribosome	1
silica_material	1
tyrosinase	1
vesicle	1
dispersion	1
enkephalin	1
phase_diagram	1
argon_gas	1
crowding	1
polysaccharide	1
pss	1
ras-raf	1
parkinson	1
contact_map	1
encapsulation	1
quantum_chemistry	1
drude	1
pdmdaac	1
three-body	1
rhodamine	1
gum_arabic	1
lidocaine	1
cyclodextrin	1
raman	1
ovomucoid	1
epr	1
hydration	1
virus_structure_and_assembly	1
nmr_experiments	1
trifluoperazine	1
diffraction	1
cathepsin	1
science	1
melatonin	1
kallikrein	1
random_numbers	1
tryptase	1
lactoperoxidase	1
qsar	1
peroxidase	1
antibiotics	1
geometry	1

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