fpattyn's sequencing [11 articles] Export

Recent papers added to fpattyn's library classified by the tag sequencing. You can also see everyone's sequencing.

	BayesCall: A model-based base-calling algorithm for high-throughput short-read sequencing [My Copy] Genome Research, Vol. 19, No. 10. (6 October 2009), pp. 1884-1895. by Wei-Chun Kao, Kristian Stevens, Yun S. Song posted to sequencing nextgen illumina high-throughput calling base by fpattyn on 2009-08-13 08:55:02 as along with 13 people and 2 groups heliopais dakelley lp2 megraw rdiaz torfinnnome djkt n00c farhat druvus polivares stajich jbhiatt BergmanLab Mycology
	Next-generation tag sequencing for cancer gene expression profiling [My Copy] Genome Research, Vol. 19, No. 10. (10 October 2009), pp. 1825-1835. by A. Sorana Morrissy, Ryan D. Morin, Allen Delaney, et al.Thomas Zeng, Helen McDonald, Steven Jones, Yongjun Zhao, Martin Hirst, Marco A. Marra posted to cancer expression gene nextgen sequencing tag-seq by fpattyn on 2009-07-14 10:05:55 as along with 4 people and 1 group hzoltan Stew torfinnnome guhjy Bioinformatics - CRUK
	MoDIL: detecting small indels from clone-end sequencing with mixtures of distributions [My Copy] Nat Meth, Vol. 6, No. 7. (31 May 2009), pp. 473-474. by Seunghak Lee, Fereydoun Hormozdiari, Can Alkan, Michael Brudno posted to clone-end indel nextgen sequencing by fpattyn on 2009-07-02 14:00:17 as along with 3 people and 1 group ongenetics druvus dakelley Neuroblastoma
	Genome-Wide Identification of Human RNA Editing Sites by Parallel DNA Capturing and Sequencing [My Copy] Science, Vol. 324, No. 5931. (29 May 2009), pp. 1210-1213. by Jin B. Li, Erez Y. Levanon, Jung-Ki Yoon, et al.John Aach, Bin Xie, Emily Leproust, Kun Zhang, Yuan Gao, George M. Church posted to capturing dna editing genomewide nextgen rna sequencing by fpattyn on 2009-05-29 08:04:05 as along with 8 people absterga reyez fenghezi hagechouchin443 neils djkt jbhiatt giovanni
	Genome-wide profiles of STAT1 DNA association using chromatin immunoprecipitation and massively parallel sequencing [My Copy] Nature Methods, Vol. 4, No. 8. (11 June 2007), pp. 651-657. by Gordon Robertson, Martin Hirst, Matthew Bainbridge, et al.Misha Bilenky, Yongjun Zhao, Thomas Zeng, Ghia Euskirchen, Bridget Bernier, Richard Varhol, Allen Delaney, Nina Thiessen, Obi L. Griffith, Ann He, Marco Marra, Michael Snyder, Steven Jones posted to chip chipsequencing sequencing by fpattyn on 2009-04-15 14:30:17 as along with 13 people and 1 group absterga samanthacooper stubrown ewilban1 polivares caseybrown guhjy vega kengg ghattem slevy03 dquest raiyar Plantandetc
	Design and analysis of ChIP-seq experiments for DNA-binding proteins. [My Copy] Nature biotechnology, Vol. 26, No. 12. (16 December 2008), pp. 1351-1359. by Peter V. Kharchenko, Michael Y. Tolstorukov, Peter J. Park posted to algorithm analysis binding chip design dna protein sequencing software by fpattyn on 2008-12-11 01:30:44 as along with 19 people and 2 groups hzoltan stubrown guhjy gdb tonamswish ewilban1 coela ekotelnikova jfr floatingpoint idonaldson inesdesantiago WanderingAengus vplagnol xwbcn mutagenic kengg rschulz ghattem KCL & UCL Bioinformatics SIMR bioinformatics
	Model-based Analysis of ChIP-Seq (MACS) [My Copy] Genome Biology, Vol. 9, No. 9. (2008), R137. by Yong Zhang, Tao Liu, Clifford Meyer, et al.Jerome Eeckhoute, David Johnson, Bradley Bernstein, Chad Nussbaum, Richard Myers, Myles Brown, Wei Li, X. Shirley Liu posted to analysis chip sequencing by fpattyn on 2008-09-24 09:16:11 as along with 24 people and 2 groups hzoltan Vincent_Rouilly darian stubrown mkiyer humburg cassj floatingpoint WanderingAengus bryankr jfr rschulz mcm polivares gdb ghattem yadadi djkt stajich mdperry bcondon idonaldson caseybrown kengg SIMR bioinformatics Mycology
	A simple algorithm for quantifying DNA methylation levels on multiple independent CpG sites in bisulfite genomic sequencing electropherograms [My Copy] Nucl. Acids Res., Vol. 36, No. 11. (1 June 2008), e64. by Tatiana I. Leakey, Jerzy Zielinski, Rachel N. Siegfried, Eric R. Siegel, Chun-Yang Fan, Craig A. Cooney posted to dna epigenetics methylation sequencing by fpattyn on 2008-06-24 16:16:23 as
	EagleView: A genome assembly viewer for next-generation sequencing technologies [My Copy] Genome Research, Vol. 18, No. 9. (11 September 2008), pp. 1538-1543. by Weichun Huang, Gabor Marth posted to nextgen sequencing software viewer by fpattyn on 2008-06-19 06:16:13 as along with 15 people Thaverkamp imaginatio hpaces darian n00c xingxu natstreet abizar druvus balicea bcondon APRegier Neeperando GustavoLacerda guhjy
	RNA-seq: an assessment of technical reproducibility and comparison with gene expression arrays. [My Copy] Genome research, Vol. 18, No. 9. (11 September 2008), pp. 1509-1517. by John C. Marioni, Christopher E. Mason, Shrikant M. Mane, Matthew Stephens, Yoav Gilad posted to expression gene nextgen sequencing by fpattyn on 2008-06-19 06:15:13 as along with 46 people and 2 groups cthachuk hzoltan jwfoley heliopais debasis maren mtagaya mkiyer stubrown woodson8 jonilaserson burak Ayest ThomasDOtto huali n00c natstreet bandrewfox daed dandaman slevy03 pengchy felsani coela shikin fhalbrit inesdesantiago jmcq lp2 caseybrown jfr dakelley Ema balicea vega lusk semrich vmarshal stajich giovanni ela503 Stew guhjy kengg shurjo GustavoLacerda SIMR bioinformatics Mycology
	Inferring causal relationships among different histone modifications and gene expression [My Copy] Genome Research, Vol. 18, No. 8. (18 August 2008), pp. 1314-1324. by Hong Yu, Shanshan Zhu, Bing Zhou, Huiling Xue, Jing-Dong J. Han posted to chip expression gene histone nextgen sequencing by fpattyn on 2008-06-19 05:54:20 as along with 10 people daveGerrard mingzhi suizifish felsani rschulz ptrobajo bootsy bcondon sharmapank klo

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fpattyn's sequencing [11 articles] Export

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