Simpleaffy: a BioConductor package for Affymetrix Quality Control and data analysis Export

@article{citeulike:333219, abstract = {Summary: Quality Control is a fundamental aspect of successful microarray data analysis. Simpleaffy is a BioConductor package that provides access to a variety of QC metrics for assessing the quality of RNA samples and of the intermediate stages of sample preparation and hybridization. Simpleaffy also offers fast implementations of popular algorithms for generating expression summaries and detection calls. Availability: Simpleaffy can be downloaded from http://www.bioconductor.org Contact: cmiller@picr.man.ac.uk Supplementary information: Additional information can be found on the supplementary website located at http://bioinformatics.picr.man.ac.uk 10.1093/bioinformatics/bti605}, author = {Wilson, Claire L. and Miller, Crispin J.}, citeulike-article-id = {333219}, citeulike-linkout-0 = {http://dx.doi.org/10.1093/bioinformatics/bti605}, citeulike-linkout-1 = {http://bioinformatics.oxfordjournals.org/content/21/18/3683.abstract}, citeulike-linkout-2 = {http://bioinformatics.oxfordjournals.org/content/21/18/3683.full.pdf}, citeulike-linkout-3 = {http://bioinformatics.oxfordjournals.org/cgi/content/abstract/21/18/3683}, citeulike-linkout-4 = {http://www.ingentaconnect.com/content/oup/cabios/2005/00000021/00000018/art03683}, citeulike-linkout-5 = {http://view.ncbi.nlm.nih.gov/pubmed/16076888}, citeulike-linkout-6 = {http://www.hubmed.org/display.cgi?uids=16076888}, day = {15}, doi = {10.1093/bioinformatics/bti605}, issn = {1367-4803}, journal = {Bioinformatics}, keywords = {affymetrix, bioconductor, mas5, preprocessing, simpleaffy}, month = {September}, number = {18}, pages = {3683--3685}, posted-at = {2009-02-19 10:05:20}, priority = {2}, publisher = {Oxford University Press}, title = {Simpleaffy: a BioConductor package for Affymetrix Quality Control and data analysis}, url = {http://dx.doi.org/10.1093/bioinformatics/bti605}, volume = {21}, year = {2005} }

TY - JOUR ID - citeulike:333219 L3 - citeulike-article-id:333219 N2 - Summary: Quality Control is a fundamental aspect of successful microarray data analysis. Simpleaffy is a BioConductor package that provides access to a variety of QC metrics for assessing the quality of RNA samples and of the intermediate stages of sample preparation and hybridization. Simpleaffy also offers fast implementations of popular algorithms for generating expression summaries and detection calls. Availability: Simpleaffy can be downloaded from http://www.bioconductor.org Contact: cmiller@picr.man.ac.uk Supplementary information: Additional information can be found on the supplementary website located at http://bioinformatics.picr.man.ac.uk 10.1093/bioinformatics/bti605 IS - 18 JF - Bioinformatics SN - 1367-4803 EP - 3685 TI - Simpleaffy: a BioConductor package for Affymetrix Quality Control and data analysis PB - Oxford University Press VL - 21 SP - 3683 KW - affymetrix KW - bioconductor KW - mas5 KW - preprocessing KW - simpleaffy AU - Wilson, Claire AU - Miller, Crispin PY - 2005/09/15/ UR - http://dx.doi.org/10.1093/bioinformatics/bti605 ER -