CiteULike: A Quick Guide to Organizing Computational Biology Projects

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breast-cancer	240
microarray	92
microarray-data	82
bayesian-network	75
microarray-data-analysis	65
ovarian-cancer	61
proteomics	55
arraycgh	45
signature	44
database	39
network	39
prognosis	34
microrna	31
data-integration	31
pathway	30
mirna	28
snp	28
sequencing	27
cnv	26
lung-cancer	25
mutation	24
integration	22
oncology	21
cancer	21
biomarker	21
epigenomics	21
classification	20
clustering	20
survival	20
human	19
mass-spectrometry	19
expo	19
regulatory	18
methylation	18
rectal-cancer	16
metastasis	16
tissue-specific	16
metabolomics	16
preprocessing	15
gene	15
svm	15
disease-network	14
seldi	14
priors	14
cetuximab	13
second-generation-sequencing	13
alternative-splicing	13
protein-interaction-network	13
affymetrix	13
disease	12
interaction	12
drug	12
mirna-target-prediction	12
methylome	12
tool	12
treatment	12
gsea	11
geo	11
leukemia	11
module	11
brca1	11
signatures	11
genetic	11
protein	11
ppi	11
meta-analysis	10
omics	10
yeast	10
online	10
systems-biology	10
validation	10
microarray-technology	10
outcome	9
diagnosis	9
cdna	9
gene-expression	9
tumor	9
ismb2008	9
maldi	9
comment	9
subtypes	8
familial-ovarian-cancer	8
colorectal-cancer	8
egfr	8
cell-line	8
regulatory-network	8
book	8
transcription-factor	7
genome-wide-association	7
metastases-signature	7
technology	7
clinical	7
bayesian	7
mutual-information	7
tissue	7
genomic	7
gene-network	7
reverse-engineering-gene-network	7
clinical-microarray	7
benchmark	6
cgh	6
cancer-unknown-origin	6
glioma	6
inference	6
proliferation	6
selection	6
luminal	6
tp53	6
expression	6
therapy	6
statistics	6
model	6
personalized-medicine	6
kernel	6
grade	6
metastases	6
multiple-testing	6
theoretical	6
iota	5
21-gene	5
colon	5
hypoxia	5
regression	5
rma	5
genotype	5
colon-cancer	5
recurrence-score	5
phenotype	5
feature-selection	5
70-gene	5
lssvm	5
roc	5
quality-control	5
hapmap	5
sample-size-estimation	5
profile	5
enrichment	5
liver	5
liver-cancer	4
connectivity-map	4
id-translation	4
bioconductor	4
unsupervised	4
hcc	4
svd	4
prostate-cancer	4
flow-cytometry	4
cosmic	4
antibody-microarray	4
oncomine	4
brain-cancer	4
prognostic	4
ggi	4
geneset	4
brca2	4
census	4
hprd	4
for:jfr	4
gwa	4
text-mining	4
myc	4
sam	4
aracne	4
dynamic	4
eqtl	4
oncogene	4
p53	4
estrogen-receptor	4
visualization	4
hepatocellular-carcinoma	4
biclustering	4
vandevijver	4
transcriptome	4
glioblastoma	4
endometriosis	4
feature	4
wound-signature	3
map	3
mouse	3
curve	3
motif_discovery	3
sequence	3
genome	3
criteria	3
stem-cell	3
six-genes-model	3
stroma	3
mirna-activity-score	3
text-prior	3
histology	3
cytoscape	3
paired-samples	3
sampling	3
decision-tree	3
markov	3
somatic	3
intrinsic	3
drug-network	3
metaphasecgh	3
genome-sequence	3
her2	3
multi-cancer	3
histone	3
molecular-classification	3
postn	3
proteome	3
differential-equation	3
pca	3
serum	3
chip-chip	3
76-gene	3
chromatin	3
intact	3
experimental-identification	3
causal	3
graphical	3
transbig	3
website	3
platin	3
vector	3
targetscan	3
literature	3
cell-cycle	3
identification	3
lung-metastasis	3
rectal	3
algorithms	3
false-discovery	3
phosphorylation	3
lymphoma	3
text	3
basal	3
bayesian-integration	3
naive	3
platinum-resistance	3
roc-curve	3
epithelial-mesenchymal-transition	3
connectivity	3
protein-dna-interaction	3
prostate	3
ai	3
kegg	3
brca	3
experiment-design	3
perspective	3
conventional	2
kinase	2
hupo	2
gcrma	2
syntren	2
plasma-proteome-project	2
hmm	2
pancreas	2
nobel-prize	2
normal-expression	2
synergy	2
tiling-microarray	2
modularity	2
itraq	2
database-genomic-variants	2
bias	2
go	2
signaling	2
e-coli	2
standarization	2
r	2
transcriptomics	2
epidemiology	2
discretization	2
endometrial	2
cgap	2
fold-change	2
pictar	2
loss	2
robo1	2
protein-kinase	2
learning	2
death	2
motif	2
il6	2
variance-filtering	2
classifiers	2
pptc	2
st	2
msigdb-geneset	2
performance	2
r-package	2
gallen	2
cytoscape-plugin	2
nbr1	2
intrinsic-genes	2
index	2
medical-decision-support	2
passenger-mutation	2
silac	2
permutation	2
estrogen	2
tailorx	2
tumor-suppressor	2
cdf	2
bind	2
leukemia_aml	2
nearest-neighbor	2
atlas	2
utr	2
ann	2
rate	2
hepatology	2
interleukin	2
randomization	2
masses	2
regulatory-network-inference	2
imaging	2
t-test	2
machine-learning	2
apc	2
ca125	2
multiclass	2
normalization	2
crohn	2
entropy	2
mas5	2
differential-expression	2
fdr	2
pregnancies	2
robustness	2
aberration	2
genetic-algorithm	2
tensor	2
topology	2
bingo	2
aml	2
mmp-9	2
maqc	2
solexa	2
network-analysis	2
bladder-cancer	2
cancer-network	2
ovacheck	2
mint	2
normal	2
miranda	2
context	2
wikipathways	2
anova	2
amsterdam	2
psb2008	2
metabolism	2
for:pkonings	2
trial	2
malignant	2
overfitting	2
comparativecgh	2
editorial	2
graph	2
biopax	2
liquid-chromatography	2
annotation	2
phylogeny	2
chemo	2
clinical-trial	2
prediction	2
prioritization	2
cost	2
area-under-roc-curve	2
vegf	2
sporadic	2
recurrent	2
fibroblast	2
feature-dependence	2
ode	2
bootstrap	2
epistasis	2
hox	2
solid-tumors	2
structure	2
variable	2
tcga	2
biology	2
benign	2
kras	2
error	2
oral-cancer	2
multi-scale-modeling	2
cancer-data	2
first-maldi	2
prior	2
tap	2
platinum	2
hidden	2
mammaprint	2
non-coding-rna	2
structure-learning	1
comparison	1
cdna_microarray_data	1
david	1
fusions	1
set	1
nottingham	1
phd	1
biosynthesis	1
ct	1
chromosome	1
essentiality	1
squamous	1
platform	1
significance-analysis-of-microarrays	1
tobacco_exposure	1
veer	1
early-detection	1
teratoma	1
pearson-correlation	1
coding-sequence	1
translational-medicine	1
oncomap	1
values	1
probabilistic	1
seed-and-soil	1
pten	1
signs	1
porter	1
tamoxifen	1
overview	1
oncogene-addiction	1
population	1
dworak	1
confidence-measure	1
sequence-venter	1
multivariate	1
tree	1
evolution	1
logistic	1
functional-enrichment	1
molecular-biology	1
hepg2	1
fuzzy	1
ras	1
read-mapping	1
frequentist	1
extension	1
cancer-signaling	1
luminex	1
globaltest	1
simpleaffy	1
overtreatment	1
ophid	1
hypothesis	1
ras-pathway	1
hopach	1
note	1
inactivation	1
pet	1
kras-mutation	1
first-esi	1
signature-candidate	1
graph-notation	1
q2	1
insurance	1
1kb-cnv	1
splicing-machinery	1
reference-methylome	1
killer	1
rt-pcr	1
human-proteome	1
il4	1
project	1
spectral_analysis	1
support	1
wisp1	1
colorectal	1
bacterial	1
reproducible_research	1
gel-proteomics	1
amphiregulin	1
phd-geert-fannes	1
external	1
multiple-reaction-monitoring	1
compendium	1
cross-validation	1
epithelial	1
directional	1
non-parametric	1
resistance	1
renal-cancer	1
non-negative-matrix-factorization	1
acads	1
spacc	1
logistic-regression	1
logic	1
class-prediction	1
pita	1
corrigendum	1
adm	1
for:rdiaz	1
fbxo31	1
transfac	1
esophageal-cancer	1
arc-probability	1
g-csf	1