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breast-cancer	247
microarray-data	95
microarray	89
bayesian-network	88
microarray-data-analysis	65
ovarian-cancer	61
proteomics	55
signature	49
arraycgh	45
database	39
network	38
data-integration	35
prognosis	35
microrna	31
pathway	31
mirna	29
snp	28
sequencing	27
regulatory-network	27
cnv	26
lung-cancer	25
mutation	24
oncology	23
clustering	23
preprocessing	23
survival	22
alternative-splicing	22
integration	22
epigenomics	21
classification	21
cancer	21
affymetrix	21
biomarker	21
expo	19
mass-spectrometry	19
human	19
methylation	18
tissue-specific	17
yeast	17
rectal-cancer	16
metastasis	16
svm	16
metabolomics	16
ppi	15
gene	15
priors	15
disease-network	15
regulatory	14
gsea	14
seldi	14
second-generation-sequencing	13
protein-interaction-network	13
mirna-target-prediction	13
cetuximab	13
methylome	12
tool	12
drug	12
disease	12
treatment	12
leukemia	12
interaction	11
signatures	11
brca1	11
systems-biology	11
meta-analysis	11
geo	11
id-translation	11
validation	10
module	10
genetic	10
omics	10
online	10
protein	10
microarray-technology	10
maldi	9
gene-expression	9
reverse-engineering-gene-network	9
cdna	9
ismb2008	9
outcome	9
comment	9
tumor	9
diagnosis	9
transcription-factor	9
bayesian	9
gene-network	8
egfr	8
familial-ovarian-cancer	8
book	8
subtypes	8
cell-line	8
mutual-information	8
bayesian-network-extension	8
colorectal-cancer	8
functional-enrichment	7
expression	7
multiple-testing	7
kernel	7
genome-wide-association	7
genomic	7
clinical	7
clinical-microarray	7
regression	7
tissue	7
technology	7
metastases-signature	7
glioma	6
tp53	6
feature-selection	6
prm	6
personalized-medicine	6
cancer-unknown-origin	6
benchmark	6
therapy	6
theoretical	6
cdf	6
selection	6
text-mining	6
cgh	6
luminal	6
inference	6
statistics	6
grade	6
colon-cancer	6
metastases	6
proliferation	6
svd	5
quality-control	5
21-gene	5
hprd	5
iota	5
lssvm	5
prognostic	5
roc	5
unsupervised	5
recurrence-score	5
genotype	5
rma	5
visualization	5
colon	5
profile	5
liver	5
phenotype	5
sample-size-estimation	5
hypoxia	5
hapmap	5
70-gene	5
cytoscape	4
ggi	4
enrichment	4
flow-cytometry	4
vandevijver	4
causal	4
transcriptome	4
model	4
module-network	4
cell-cycle	4
chip-chip	4
cosmic	4
eqtl	4
p53	4
gwa	4
endometriosis	4
feature	4
estrogen-receptor	4
glioblastoma	4
liver-cancer	4
hcc	4
antibody-microarray	4
oncomine	4
connectivity-map	4
geneset	4
for:jfr	4
brca2	4
census	4
bioconductor	4
molecular-classification	4
sam	4
dynamic	4
hepatocellular-carcinoma	4
prostate-cancer	4
kegg	4
decision-tree	4
oncogene	4
biclustering	4
brain-cancer	4
drug-network	4
aracne	4
myc	4
mirna-activity-score	3
map	3
bind	3
mouse	3
curve	3
motif_discovery	3
sequence	3
genome	3
criteria	3
stem-cell	3
six-genes-model	3
modularity	3
stroma	3
text-prior	3
histology	3
paired-samples	3
sampling	3
topology	3
somatic	3
wound-signature	3
intrinsic	3
metaphasecgh	3
genome-sequence	3
entropy	3
multi-cancer	3
mammaprint	3
postn	3
proteome	3
differential-equation	3
prioritization	3
pca	3
serum	3
76-gene	3
chromatin	3
intact	3
fdr	3
experimental-identification	3
graphical	3
java	3
transbig	3
e-coli	3
website	3
platin	3
vector	3
targetscan	3
literature	3
identification	3
exon	3
lung-metastasis	3
hmm	3
rectal	3
algorithms	3
false-discovery	3
phosphorylation	3
genetic-algorithm	3
lymphoma	3
text	3
basal	3
error	3
bayesian-integration	3
naive	3
platinum-resistance	3
roc-curve	3
epithelial-mesenchymal-transition	3
connectivity	3
protein-dna-interaction	3
regulatory-network-inference	3
prostate	3
ai	3
brca	3
experiment-design	3
bootstrap	3
perspective	3
her2	3
histone	3
hupo	2
hiv	2
bias	2
death	2
leukemia_aml	2
il6	2
variance-filtering	2
robo1	2
multi-scale-modeling	2
syntren	2
msigdb-geneset	2
pc-algoritme	2
psb	2
gallen	2
go	2
module-map	2
editorial	2
knock-out-experiments	2
interleukin	2
pictar	2
signaling	2
synergy	2
standarization	2
t-test	2
tailorx	2
tumor-suppressor	2
drug-response-prediction	2
plasma-proteome-project	2
solid-tumors	2
aml	2
maqc	2
utr	2
multiclass	2
rate	2
masses	2
gcrma	2
differential-expression	2
apc	2
miranda	2
promoter_elements	2
motif	2
machine-learning	2
non-parametric	2
malignant	2
classifiers	2
ovacheck	2
prior	2
tcga	2
kinase	2
network-analysis	2
conventional	2
area-under-roc-curve	2
sporadic	2
st	2
logistic	2
bingo	2
pancreas	2
learning	2
liquid-chromatography	2
bladder-cancer	2
mmp-9	2
influence-score	2
mint	2
solexa	2
normal	2
phylogeny	2
cancer-data	2
wikipathways	2
amsterdam	2
dynamic-bayesian-network	2
for:pkonings	2
benign	2
pptc	2
atlas	2
epistasis	2
passenger-mutation	2
feature-dependence	2
hox	2
therapy-response	2
cancer-network	2
biology	2
r-package	2
intrinsic-genes	2
estrogen	2
ode	2
annotation	2
discretization	2
tap	2
tensor	2
platinum	2
silac	2
endometrial	2
crohn	2
metabolism	2
database-genomic-variants	2
oral-cancer	2
loss	2
overfitting	2
comparativecgh	2
structure	2
nearest-neighbor	2
biopax	2
protein-kinase	2
graph	2
pregnancies	2
non-coding-rna	2
anova	2
clinical-trial	2
randomization	2
nobel-prize	2
cost	2
ncbi	2
vegf	2
performance	2
ca125	2
cytoscape-plugin	2
tiling-microarray	2
normalization	2
fibroblast	2
trial	2
ann	2
normal-expression	2
chemo	2
variable	2
mas5	2
interactome	2
nbr1	2
itraq	2
permutation	2
psb2008	2
robustness	2
prediction	2
first-maldi	2
aberration	2
context	2
hepatology	2
r	2
transcriptomics	2
lasso	2
imaging	2
recurrent	2
medical-decision-support	2
epidemiology	2
cgap	2
fold-change	2
kras	2
gaussian_models	2
index	2
translocation	1
coding-sequence	1
translational-medicine	1
values	1
probabilistic	1
seed-and-soil	1
set	1
signs	1
nottingham	1
tamoxifen	1
raster	1
phd	1
markov-blanket	1
neuroblastoma	1
confidence-measure	1
histological_types	1
sequence-venter	1
multivariate	1
tree	1
evolution	1
biosynthesis	1
molecular-biology	1
fuzzy	1
ras	1
read-mapping	1
frequentist	1
extension	1
squamous	1
luminex	1
latent_variable_model	1
globaltest	1
pearson-correlation	1
ophid	1
hypothesis	1
ras-pathway	1
hopach	1
post-translational-modification	1
inactivation	1
multivariate-discretization	1
pet	1
kras-mutation	1
first-esi	1
signature-candidate	1
graph-notation	1
oncomap	1
q2	1
insurance	1
1kb-cnv	1
pten	1
splicing-machinery	1
killer	1
rt-pcr	1
human-proteome	1
porter	1
project	1
oncogene-addiction	1
support	1
wisp1	1
population	1
cancer-signaling	1
reproducible_research	1
gel-proteomics	1
simpleaffy	1
phd-geert-fannes	1
side-effect	1
overtreatment	1
monosomy	1
compendium	1
cross-validation	1
epithelial	1
directional	1
resistance	1
non-negative-matrix-factorization	1
acads	1
spacc	1
logistic-regression	1
reference-methylome	1
logic	1
class-prediction	1
spectral_analysis	1
corrigendum	1
adm	1
colorectal	1
bacterial	1
fbxo31	1
amphiregulin	1
external	1

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