CiteULike: frohike's preprocessing [15 articles]

Normalization for cDNA microarray data: a robust composite method addressing single and multiple slide systematic variation.

Nucleic Acids Res, Vol. 30, No. 4. (15 February 2002)

by Y. H. Yang, S. Dudoit, P. Luu, et al.D. M. Lin, V. Peng, J. Ngai, T. P. Speed

posted to preprocessing microarray-data-analysis cdna_microarray_data cdna by frohike on 2009-12-16 17:04:56 as

along with 7 people surajitray stsaft renatomilani gupton textoris debasis talponer

A comparison of normalization methods for high density oligonucleotide array data based on variance and bias

Bioinformatics (Oxford, England) In Bioinformatics, Vol. 19, No. 2. (22 January 2003), pp. 185-193.

by B. M. Bolstad, R. A. Irizarry, M. Astrand, T. P. Speed

Summaries of Affymetrix GeneChip probe level data.

Nucleic acids research In Nucl. Acids Res., Vol. 31, No. 4. (15 February 2003), e15.

by Rafael A. Irizarry, Benjamin M. Bolstad, Francois Collin, Leslie M. Cope, Bridget Hobbs, Terence P. Speed

posted to rma preprocessing microarray-data affymetrix by frohike on 2009-12-16 17:02:44 as

along with 18 people jperkins daforerog lwaldron shikin dswan huiminC pcahan1 RMGraze aviad_work vplagnol ghattem talponer heliopais wirawan waszak rschulz bertelsen srp33

Analysis of Variance for Gene Expression Microarray Data

Journal of Computational Biology, Vol. 7, No. 6. (December 2000), pp. 819-837.

by M. Kathleen Kerr, Mitchell Martin, Gary A. Churchill

posted to preprocessing microarray-data-analysis anova by frohike on 2009-12-16 17:01:15 as

along with 5 people and 1 group kentz daveGerrard pengchy klo vertikalist BTS-PT-AS-CS

Minimum information about a microarray experiment (MIAME)|[mdash]|toward standards for microarray data

Nat Genet, Vol. 29, No. 4. (01 December 2001), pp. 365-371.

posted to standarization preprocessing microarray-data-analysis miame by frohike on 2009-12-16 16:56:49 as

along with 15 people and 3 groups mtaschuk balajis daforerog idoerg moonhouse kittipat irenas setar jandot fisherp jeremymiller aconesa sgoetz katerinakal shikin dbk-lab GeschwindLab GeneGo

Comparison of normalisation methods for surface-enhanced laser desorption and ionisation (SELDI) time-of-flight (TOF) mass spectrometry data

BMC Bioinformatics, Vol. 9, No. 1. (07 February 2008), 88.

by Wouter Meuleman, Judith Engwegen, Marie C. Gast, Jos Beijnen, Marcel Reinders, Lodewyk Wessels

posted to seldi proteomics preprocessing by frohike on 2009-12-16 10:08:55 as

along with 3 people Shibby ptrobajo jxl

The utility of MAS5 expression summary and detection call algorithms

BMC Bioinformatics, Vol. 8, No. 1. (2007)

by Stuart Pepper, Emma Saunders, Laura Edwards, Claire Wilson, Crispin Miller

posted to affymetrix gcrma mas5 preprocessing rma by frohike on 2009-02-19 10:06:09 as

along with 7 people dswan lwaldron heliopais jfr ryanraaum wirawan waszak

Simpleaffy: a BioConductor package for Affymetrix Quality Control and data analysis

Bioinformatics, Vol. 21, No. 18. (15 September 2005), pp. 3683-3685.

by Claire L. Wilson, Crispin J. Miller

posted to simpleaffy preprocessing mas5 bioconductor affymetrix by frohike on 2009-02-19 10:05:20 as

along with 4 people and 1 group vertikalist daforerog zufar bertelsen BTS-PT-AS-CS

Comparative analysis of microarray normalization procedures: effects on reverse engineering gene networks.

Bioinformatics (Oxford, England), Vol. 23, No. 13. (1 July 2007), pp. i282-288.

by Wei Keat K. Lim, Kai Wang, Celine Lefebvre, Andrea Califano

posted to reverse-engineering-gene-network affymetrix gcrma microarray preprocessing rma by frohike on 2009-02-09 15:00:57 as

along with 12 people jperkins jeremymiller lawraga bertelsen huiminC dubhelix giovenko pengchy aramesh2 shigepong ghattem heliopais

Comparison of Methods for Image Analysis on cDNA Microarray Data

Journal of Computational & Graphical Statistics, Vol. 11, No. 1. (March 2002), pp. 108-136.

by Y. H. Yang, M. J. Buckley, S. Dudoit, T. P. Speed

posted to microarray-data-analysis cdna preprocessing by frohike on 2008-09-17 12:00:35 as

Microarray data normalization and transformation

Nature Genetics, Vol. 32 Suppl (01 December 2002), pp. 496-501.

by John Quackenbush

posted to microarray preprocessing standarization by frohike on 2008-06-17 15:42:11 as

along with 10 people seb1 stharward surajitray daforerog textoris alokm chad_davis schuylrp heliopais bertelsen

The effect of oligonucleotide microarray data pre-processing on the analysis of patient-cohort studies.

BMC Bioinformatics, Vol. 7 (2006)

by R. G. Verhaak, F. J. Staal, P. J. Valk, B. Lowenberg, M. J. Reinders, D. de Ridder

posted to expo microarray preprocessing rma by frohike on 2008-05-14 11:16:27 as

along with 3 people jfr RMGraze ghattem

Interpretation of multiple probe sets mapping to the same gene in Affymetrix GeneChips

BMC Bioinformatics, Vol. 8 (15 January 2007), 13.

by Maria A. Stalteri, Andrew P. Harrison

posted to id-translation affymetrix annotation preprocessing probesets by frohike on 2008-04-18 15:47:09 as

along with 8 people sebastien_vigneau guhjy jfr gpalidwor hpiwowar ghattem bertelsen heliopais

Transcript-based redefinition of grouped oligonucleotide probe sets using AceView: High-resolution annotation for microarrays

BMC Bioinformatics, Vol. 8 (29 March 2007), 108.

by Jun Lu, Joseph C. Lee, Marc L. Salit, Margaret C. Cam

posted to affymetrix cdf preprocessing by frohike on 2008-03-19 09:19:48 as

along with 5 people and 1 group heliopais guhjy jfr ghattem bertelsen Bioinformatics

Exploration, normalization, and summaries of high density oligonucleotide array probe level data

Biostat, Vol. 4, No. 2. (2003), pp. 249-264.

by Rafael A. Irizarry, Bridget Hobbs, Francois Collin, et al. Yasmin, Kristen J. Antonellis, Uwe Scherf, Terence P. Speed

posted to preprocessing normalization microarray affymetrix by frohike on 2006-10-31 10:05:48 as

	Normalization for cDNA microarray data: a robust composite method addressing single and multiple slide systematic variation. [My Copy] Nucleic Acids Res, Vol. 30, No. 4. (15 February 2002) by Y. H. Yang, S. Dudoit, P. Luu, et al.D. M. Lin, V. Peng, J. Ngai, T. P. Speed posted to preprocessing microarray-data-analysis cdna_microarray_data cdna by frohike on 2009-12-16 17:04:56 as along with 7 people surajitray stsaft renatomilani gupton textoris debasis talponer
	A comparison of normalization methods for high density oligonucleotide array data based on variance and bias [My Copy] Bioinformatics (Oxford, England) In Bioinformatics, Vol. 19, No. 2. (22 January 2003), pp. 185-193. by B. M. Bolstad, R. A. Irizarry, M. Astrand, T. P. Speed posted to rma preprocessing microarray-data-analysis affymetrix by frohike on 2009-12-16 17:03:52 as along with 24 people lwaldron jperkins vplagnol brianb neils ipark-kaist shikin michaelbarton emptyhb noushin huiminC cassj Dax42 pcahan1 chad_davis RMGraze gjuggler filmsternchen qmwwallace joepickrell ghattem bertelsen vertikalist GeeSharpMinor
	Summaries of Affymetrix GeneChip probe level data. [My Copy] Nucleic acids research In Nucl. Acids Res., Vol. 31, No. 4. (15 February 2003), e15. by Rafael A. Irizarry, Benjamin M. Bolstad, Francois Collin, Leslie M. Cope, Bridget Hobbs, Terence P. Speed posted to rma preprocessing microarray-data affymetrix by frohike on 2009-12-16 17:02:44 as along with 18 people jperkins daforerog lwaldron shikin dswan huiminC pcahan1 RMGraze aviad_work vplagnol ghattem talponer heliopais wirawan waszak rschulz bertelsen srp33
	Analysis of Variance for Gene Expression Microarray Data [My Copy] Journal of Computational Biology, Vol. 7, No. 6. (December 2000), pp. 819-837. by M. Kathleen Kerr, Mitchell Martin, Gary A. Churchill posted to preprocessing microarray-data-analysis anova by frohike on 2009-12-16 17:01:15 as along with 5 people and 1 group kentz daveGerrard pengchy klo vertikalist BTS-PT-AS-CS
	Minimum information about a microarray experiment (MIAME)\|[mdash]\|toward standards for microarray data [My Copy] Nat Genet, Vol. 29, No. 4. (01 December 2001), pp. 365-371. by Alvis Brazma, Pascal Hingamp, John Quackenbush, et al.Gavin Sherlock, Paul Spellman, Chris Stoeckert, John Aach, Wilhelm Ansorge, Catherine A. Ball, Helen C. Causton, Terry Gaasterland, Patrick Glenisson, Frank C. P. Holstege, Irene F. Kim, Victor Markowitz, John C. Matese, Helen Parkinson, Alan Robinson, Ugis Sarkans, Steffen Schulze-Kremer, Jason Stewart, Ronald Taylor, Jaak Vilo, Martin Vingron posted to standarization preprocessing microarray-data-analysis miame by frohike on 2009-12-16 16:56:49 as along with 15 people and 3 groups mtaschuk balajis daforerog idoerg moonhouse kittipat irenas setar jandot fisherp jeremymiller aconesa sgoetz katerinakal shikin dbk-lab GeschwindLab GeneGo
	Comparison of normalisation methods for surface-enhanced laser desorption and ionisation (SELDI) time-of-flight (TOF) mass spectrometry data [My Copy] BMC Bioinformatics, Vol. 9, No. 1. (07 February 2008), 88. by Wouter Meuleman, Judith Engwegen, Marie C. Gast, Jos Beijnen, Marcel Reinders, Lodewyk Wessels posted to seldi proteomics preprocessing by frohike on 2009-12-16 10:08:55 as along with 3 people Shibby ptrobajo jxl
	The utility of MAS5 expression summary and detection call algorithms [My Copy] BMC Bioinformatics, Vol. 8, No. 1. (2007) by Stuart Pepper, Emma Saunders, Laura Edwards, Claire Wilson, Crispin Miller posted to affymetrix gcrma mas5 preprocessing rma by frohike on 2009-02-19 10:06:09 as along with 7 people dswan lwaldron heliopais jfr ryanraaum wirawan waszak
	Simpleaffy: a BioConductor package for Affymetrix Quality Control and data analysis [My Copy] Bioinformatics, Vol. 21, No. 18. (15 September 2005), pp. 3683-3685. by Claire L. Wilson, Crispin J. Miller posted to simpleaffy preprocessing mas5 bioconductor affymetrix by frohike on 2009-02-19 10:05:20 as along with 4 people and 1 group vertikalist daforerog zufar bertelsen BTS-PT-AS-CS
	Comparative analysis of microarray normalization procedures: effects on reverse engineering gene networks. [My Copy] Bioinformatics (Oxford, England), Vol. 23, No. 13. (1 July 2007), pp. i282-288. by Wei Keat K. Lim, Kai Wang, Celine Lefebvre, Andrea Califano posted to reverse-engineering-gene-network affymetrix gcrma microarray preprocessing rma by frohike on 2009-02-09 15:00:57 as along with 12 people jperkins jeremymiller lawraga bertelsen huiminC dubhelix giovenko pengchy aramesh2 shigepong ghattem heliopais
	Comparison of Methods for Image Analysis on cDNA Microarray Data [My Copy] Journal of Computational & Graphical Statistics, Vol. 11, No. 1. (March 2002), pp. 108-136. by Y. H. Yang, M. J. Buckley, S. Dudoit, T. P. Speed posted to microarray-data-analysis cdna preprocessing by frohike on 2008-09-17 12:00:35 as
	Microarray data normalization and transformation [My Copy] Nature Genetics, Vol. 32 Suppl (01 December 2002), pp. 496-501. by John Quackenbush posted to microarray preprocessing standarization by frohike on 2008-06-17 15:42:11 as along with 10 people seb1 stharward surajitray daforerog textoris alokm chad_davis schuylrp heliopais bertelsen
	The effect of oligonucleotide microarray data pre-processing on the analysis of patient-cohort studies. [My Copy] BMC Bioinformatics, Vol. 7 (2006) by R. G. Verhaak, F. J. Staal, P. J. Valk, B. Lowenberg, M. J. Reinders, D. de Ridder posted to expo microarray preprocessing rma by frohike on 2008-05-14 11:16:27 as along with 3 people jfr RMGraze ghattem
	Interpretation of multiple probe sets mapping to the same gene in Affymetrix GeneChips [My Copy] BMC Bioinformatics, Vol. 8 (15 January 2007), 13. by Maria A. Stalteri, Andrew P. Harrison posted to id-translation affymetrix annotation preprocessing probesets by frohike on 2008-04-18 15:47:09 as along with 8 people sebastien_vigneau guhjy jfr gpalidwor hpiwowar ghattem bertelsen heliopais
	Transcript-based redefinition of grouped oligonucleotide probe sets using AceView: High-resolution annotation for microarrays [My Copy] BMC Bioinformatics, Vol. 8 (29 March 2007), 108. by Jun Lu, Joseph C. Lee, Marc L. Salit, Margaret C. Cam posted to affymetrix cdf preprocessing by frohike on 2008-03-19 09:19:48 as along with 5 people and 1 group heliopais guhjy jfr ghattem bertelsen Bioinformatics
	Exploration, normalization, and summaries of high density oligonucleotide array probe level data [My Copy] Biostat, Vol. 4, No. 2. (2003), pp. 249-264. by Rafael A. Irizarry, Bridget Hobbs, Francois Collin, et al. Yasmin, Kristen J. Antonellis, Uwe Scherf, Terence P. Speed posted to preprocessing normalization microarray affymetrix by frohike on 2006-10-31 10:05:48 as

frohike's preprocessing [15 articles] Export

frohike's tags

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