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breast-cancer	236
microarray	96
bayesian-network	68
ovarian-cancer	59
microarray-data	55
microarray-data-analysis	52
proteomics	49
signature	42
arraycgh	42
database	37
network	37
microrna	31
prognosis	31
pathway	29
snp	27
sequencing	27
cnv	25
mirna	25
data-integration	24
lung-cancer	24
integration	22
cancer	21
mutation	20
epigenomics	20
survival	19
expo	19
biomarker	19
clustering	18
human	18
mass-spectrometry	18
methylation	17
regulatory	17
gene	16
rectal-cancer	16
classification	15
tissue-specific	15
metabolomics	15
metastasis	15
second-generation-sequencing	13
alternative-splicing	13
cetuximab	13
protein-interaction-network	13
treatment	12
interaction	12
disease	12
tool	12
svm	12
drug	12
genetic	11
signatures	11
methylome	11
mirna-target-prediction	11
seldi	11
protein	11
priors	11
module	10
online	10
validation	10
brca1	10
microarray-technology	10
systems-biology	10
affymetrix	10
disease-network	10
maldi	9
yeast	9
meta-analysis	9
gsea	9
gene-expression	9
outcome	9
comment	9
ismb2008	9
geo	9
tumor	9
cell-line	8
ppi	8
subtypes	8
leukemia	8
cdna	8
diagnosis	8
familial-ovarian-cancer	8
oncology	8
egfr	8
book	8
preprocessing	8
colorectal-cancer	8
clinical	7
omics	7
tissue	7
genomic	7
transcription-factor	7
reverse-engineering-gene-network	7
genome-wide-association	7
expression	7
mutual-information	7
metastases-signature	7
technology	7
cancer-unknown-origin	6
benchmark	6
inference	6
grade	6
metastases	6
model	6
selection	6
theoretical	6
bayesian	6
tp53	6
personalized-medicine	6
gene-network	6
proliferation	6
glioma	6
luminal	6
roc	5
lssvm	5
recurrence-score	5
iota	5
cgh	5
sample-size-estimation	5
colon-cancer	5
enrichment	5
multiple-testing	5
21-gene	5
regulatory-network	5
clinical-microarray	5
profile	5
kernel	5
hypoxia	5
therapy	5
70-gene	5
regression	5
colon	5
liver	5
bioconductor	4
oncomine	4
hepatocellular-carcinoma	4
aracne	4
dynamic	4
statistics	4
sam	4
ggi	4
estrogen-receptor	4
visualization	4
brca2	4
endometriosis	4
unsupervised	4
geneset	4
feature	4
flow-cytometry	4
antibody-microarray	4
hprd	4
id-translation	4
genotype	4
liver-cancer	4
oncogene	4
myc	4
phenotype	4
hcc	4
prognostic	4
gwa	4
brain-cancer	4
p53	4
biclustering	4
for:jfr	4
glioblastoma	4
vandevijver	4
transcriptome	3
genome-sequence	3
platin	3
wound-signature	3
decision-tree	3
epithelial-mesenchymal-transition	3
differential-equation	3
genome	3
lymphoma	3
chromatin	3
rectal	3
eqtl	3
protein-dna-interaction	3
somatic	3
identification	3
brca	3
vector	3
transbig	3
stem-cell	3
cytoscape	3
molecular-classification	3
algorithms	3
ai	3
postn	3
intrinsic	3
proteome	3
chip-chip	3
metaphasecgh	3
perspective	3
kegg	3
curve	3
naive	3
false-discovery	3
six-genes-model	3
connectivity	3
paired-samples	3
cell-cycle	3
causal	3
feature-selection	3
literature	3
website	3
serum	3
hapmap	3
platinum-resistance	3
graphical	3
sequence	3
mouse	3
experiment-design	3
multi-cancer	3
rma	3
phosphorylation	3
histone	3
map	3
census	3
76-gene	3
histology	3
bayesian-integration	3
intact	3
prostate	3
criteria	3
experimental-identification	3
her2	3
pca	3
text-mining	3
basal	3
text	3
markov	3
lung-metastasis	3
amsterdam	2
editorial	2
solid-tumors	2
annotation	2
st	2
kinase	2
kras	2
medical-decision-support	2
psb2008	2
e-coli	2
epidemiology	2
ovacheck	2
endometrial	2
loss	2
protein-kinase	2
performance	2
pancreas	2
cancer-network	2
permutation	2
hepatology	2
imaging	2
values	2
missing	2
signaling	2
connectivity-map	2
malignant	2
tensor	2
r-package	2
sporadic	2
index	2
targetscan	2
hidden	2
entropy	2
conventional	2
motif	2
pptc	2
estrogen	2
mammaprint	2
cosmic	2
mirna-activity-score	2
webtool	2
interleukin	2
classifiers	2
t-test	2
differential-expression	2
multiclass	2
miranda	2
context	2
network-analysis	2
benign	2
text-prior	2
hupo	2
liquid-chromatography	2
syntren	2
feature-dependence	2
hox	2
synergy	2
biology	2
topology	2
tap	2
platinum	2
structure	2
hmm	2
nobel-prize	2
crohn	2
prediction	2
chemo	2
gcrma	2
trial	2
passenger-mutation	2
cytoscape-plugin	2
nbr1	2
masses	2
robustness	2
apc	2
metabolism	2
bind	2
genetic-algorithm	2
comparativecgh	2
biopax	2
bladder-cancer	2
mint	2
normal	2
wikipathways	2
aberration	2
for:pkonings	2
clinical-trial	2
cost	2
ode	2
vegf	2
error	2
oral-cancer	2
robo1	2
non-coding-rna	2
epistasis	2
modularity	2
svd	2
drug-network	2
normal-expression	2
itraq	2
recurrent	2
variable	2
r	2
transcriptomics	2
fold-change	2
graph	2
death	2
il6	2
variance-filtering	2
roc-curve	2
msigdb-geneset	2
fibroblast	2
gallen	2
bias	2
multi-scale-modeling	2
tailorx	2
tumor-suppressor	2
cdf	2
pregnancies	2
utr	2
rate	2
plasma-proteome-project	2
tiling-microarray	2
machine-learning	2
prostate-cancer	2
learning	2
first-maldi	2
intrinsic-genes	2
stroma	2
mmp-9	2
nearest-neighbor	2
solexa	2
ca125	2
normalization	2
mas5	2
fdr	2
node-negative	1
ferritin	1
tablebuttler	1
neo1	1
kidney-cancer	1
gene_regulatory_networks	1
encode	1
partial-least-squares	1
qtl	1
flow	1
segal	1
metalloproteinase	1
region	1
tnfalpha	1
stochasticity	1
bard1	1
hepatitis	1
distributed-data	1
automatic	1
cross-talk	1
endometrium	1
boolean_models	1
dna-binding	1
interactome	1
association	1
cytokines	1
likelihood-ratio-test	1
ascites	1
correction	1
hiv	1
comparing	1
dream	1
module-map	1
location	1
cancer-versus-normal	1
nih	1
mirz	1
pik3ca	1
cancer-biomarker	1
mitochondrial-genome	1
stage	1
variation	1
machine	1
regulatory-network-inference	1
anotation	1
cup	1
birc5	1
granger-causality	1
differentially-expressed-genes	1
glycosylation	1
copy	1
agendia	1
gastric-cancer	1
radiogenomics	1
tshr	1
screening	1
probesets	1
evaluation	1
fast-algorithm	1
1000genomes	1
gaussian-graph	1
arlts1	1
differentiation	1
flush	1
commentary	1
high-dimensionality	1
cis-regulation	1
rupture	1
cpg-islands	1
plasma	1
haplotype	1
absent-present-calls	1
multiple-reaction-monitoring	1
il4	1
teratoma	1
primer	1
clustering-validation	1
ann	1
therapy-response	1
chasm	1
npi	1
mir-124	1
prospective	1
clr	1
nfkb1	1
rna	1
constraint-based-analysis	1
gynecology	1
hefalmp	1
network-medicine	1
microarray-proteomics	1
hub	1
distiller	1
epiregulin	1
go	1
polonator	1
kc-smart	1
3d-structure	1
acgh	1
gene-ontology	1
graph_measures	1
hidden-variables	1
fai-index	1
motif_discovery	1
tab-delimited	1
wheeler	1
chromosomal	1
necrosis	1
abca8	1
adnexal	1
fgfr7	1
drosophila_melanogaster	1
next-generation	1
p-value	1
for:heliopais	1
wnt	1
reverse_engineering	1
parp	1
g-csf	1
esophageal-cancer	1
for:rdiaz	1
pita	1
renal-cancer	1
external	1
amphiregulin	1
bacterial	1
colorectal	1
spectral_analysis	1
reference-methylome	1
overtreatment	1
simpleaffy	1

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