frohike's yeast [17 articles] Export

Recent papers added to frohike's library classified by the tag yeast. You can also see everyone's yeast.

	Reconciling gene expression data with known genome-scale regulatory network structures. [My Copy] Genome Res, Vol. 13, No. 11. (November 2003), pp. 2423-2434. by M. J. Herrgård, M. W. Covert, B. Ø. Palsson posted to yeast regulatory-network priors e-coli by frohike on 2009-12-21 10:20:00 as along with 3 people opheliav wnpx tvdbulck
	Transcriptional Regulatory Networks in Saccharomyces cerevisiae [My Copy] Science, Vol. 298, No. 5594. (25 October 2002), pp. 799-804. by Tong I. Lee, Nicola J. Rinaldi, Francois Robert, et al.Duncan T. Odom, Ziv Bar-Joseph, Georg K. Gerber, Nancy M. Hannett, Christopher T. Harbison, Craig M. Thompson, Itamar Simon, Julia Zeitlinger, Ezra G. Jennings, Heather L. Murray, D. Benjamin Gordon, Bing Ren, John J. Wyrick, Jean-Bosco Tagne, Thomas L. Volkert, Ernest Fraenkel, David K. Gifford, Richard A. Young posted to yeast regulatory-network-inference by frohike on 2009-12-20 15:06:56 as along with 33 people and 2 groups viren4388 mjoach kmdaily kinop junehlee lillo80 camster snuppepuppan icases forluvoft ggrot alokm opheliav samal sameetmehta cconboy koller jguinney franklin timflutre jpoyatos lusk nklee karfunkel mimulus_99 roys njcitulike brant kristallreiner Borelli Takayuki dquest siebert dbk-lab TNT
	Inferring Genetic Networks and Identifying Compound Mode of Action via Expression Profiling [My Copy] Science, Vol. 301, No. 5629. (4 July 2003), pp. 102-105. by Timothy S. Gardner, Diego di Bernardo, David Lorenz, James J. Collins posted to yeast regulatory-network by frohike on 2009-12-20 15:06:06 as along with 15 people and 9 groups Borelli edwardmorrissey myzhang mmcclean vertikalist rklancer kentsis dragonrez rhem1224 rubendrr adepace neveaire jayster4 heliopais roys BTS-PT-AS-CS Biostatistics Computational-Genomics Bioinformatics EisenLab Neuroscience TCR_Signaling cytoskeleton-and-afm SysbioMPI-TCells
	Chemogenomic profiling on a genome-wide scale using reverse-engineered gene networks [My Copy] Nature Biotechnology, Vol. 23, No. 3. (04 March 2005), pp. 377-383. by Diego di Bernardo, Michael J. Thompson, Timothy S. Gardner, et al.Sarah E. Chobot, Erin L. Eastwood, Andrew P. Wojtovich, Sean J. Elliott, Scott E. Schaus, James J. Collins posted to yeast regulatory-network knock-out-experiments gene-network experimental_approach by frohike on 2009-12-20 15:05:06 as along with 12 people and 2 groups edwardmorrissey mingzhi VGreiff provero ptrobajo rklancer snuppepuppan kentsis mjt rhem1224 balajis jayster4 TCR_Signaling SysbioMPI-TCells
	Estimation of genetic networks and functional structures between genes by using Bayesian networks and nonparametric regression. [My Copy] Pac Symp Biocomput (2002), pp. 175-186. by S. Imoto, T. Goto, S. Miyano posted to yeast regression psb non-parametric bayesian-network by frohike on 2009-12-20 14:44:29 as along with 2 people gchan02 helsley
	Correlation between transcriptome and interactome mapping data from Saccharomyces cerevisiae. [My Copy] Nature genetics, Vol. 29, No. 4. (December 2001), pp. 482-486. by H. Ge, Z. Liu, G. M. Church, M. Vidal posted to yeast interactome data-integration by frohike on 2009-12-20 14:03:08 as along with 14 people and 1 group jeremymiller lptolik Robinder BioGeek lfriedl wnpx mmt gespim bluto ruvido grahamc kintoki roys paolomarcatili kdl
	Validation and refinement of gene-regulatory pathways on a network of physical interactions. [My Copy] Genome Biol, Vol. 6, No. 7. (2005) by C. H. Yeang, H. C. Mak, S. McCuine, C. Workman, T. Jaakkola, T. Ideker posted to yeast regulatory-network prioritization perturbation knock-out-experiments by frohike on 2009-12-20 13:56:14 as along with 15 people and 1 group kaarsinogen isimpson hplatero snuppepuppan abhik tmmurali textoris wnpx noano koller ccr cdppublications AlexanderPico carlk jago CDP
	Dissecting the Regulatory Circuitry of a Eukaryotic Genome [My Copy] Cell, Vol. 95, No. 5. (25 November 1998), pp. 717-728. by Frank C. Holstege, Ezra G. Jennings, John J. Wyrick, et al.Tong I. Lee, Christoph J. Hengartner, Michael R. Green, Todd R. Golub, Eric S. Lander, Richard A. Young posted to yeast microarray-data by frohike on 2009-12-16 17:42:09 as along with 2 people mapplab michaelbarton
	A systems approach to mapping DNA damage response pathways. [My Copy] Science (New York, N.Y.), Vol. 312, No. 5776. (19 May 2006), pp. 1054-1059. by Christopher T. Workman, H. Craig Mak, Scott McCuine, et al.Jean-Bosco B. Tagne, Maya Agarwal, Owen Ozier, Thomas J. Begley, Leona D. Samson, Trey Ideker posted to yeast transcription-factor regulatory-network network by frohike on 2009-12-11 20:22:43 as along with 10 people nzm arsyed roys isimpson biozhang2001 jfr nirfriedman cconboy koller tmmurali
	Context-sensitive data integration and prediction of biological networks. [My Copy] Bioinformatics (Oxford, England), Vol. 23, No. 17. (1 September 2007), pp. 2322-2330. by Chad L. Myers, Olga G. Troyanskaya posted to yeast tissue-specific network expo data-integration context bayesian by frohike on 2009-12-11 19:02:16 as along with 8 people tmmurali rdiaz grahamc iris_2001 nedwards shung carlk guhjy
	Global effects of DNA replication and DNA replication origin activity on eukaryotic gene expression [My Copy] Molecular Systems Biology, Vol. 5 (13 October 2009) by Larsson Omberg, Joel R. Meyerson, Kayta Kobayashi, Lucy S. Drury, John F. X. Diffley, Orly Alter posted to microarray-data cell-cycle yeast tensor svd by frohike on 2009-10-19 09:46:47 as along with 1 person installe
	Harnessing gene expression to identify the genetic basis of drug resistance [My Copy] Molecular Systems Biology, Vol. 5 (13 October 2009) by Bo-Juen Chen, Helen C. Causton, Denesy Mancenido, Noel L. Goddard, Ethan O. Perlstein, Dana Pe'er posted to microarray-data drug-response-prediction drug-network yeast sequence genotype by frohike on 2009-10-14 10:08:55 as along with 4 people dswan ashishanand phoenixzxl ptrobajo
	A Yeast Synthetic Network for In Vivo Assessment of Reverse-Engineering and Modeling Approaches [My Copy] Cell, Vol. 137, No. 1. (03 April 2009), pp. 172-181. by Irene Cantone, Lucia Marucci, Francesco Iorio, et al.Maria A. Ricci, Vincenzo Belcastro, Mukesh Bansal, Stefania Santini, Mario di Bernardo, Diego di Bernardo, Maria P. Cosma posted to no-tag systems-biology reverse-engineering-gene-network mutual-information granger-causality differential-equation bayesian-network yeast ode by frohike on 2009-08-13 08:27:32 as along with 8 people and 1 group Borelli absterga coela stasaki behindtherabbit zwang jjray phoenixzxl cube_and_beyond
	Identification of functional modules using network topology and high-throughput data. [My Copy] BMC systems biology, Vol. 1, No. 1. (2007), 8. by Igor Ulitsky, Ron Shamir posted to module yeast ppi network microarray-data by frohike on 2008-09-16 09:50:00 as along with 18 people greg akshayk ptrobajo yaredo isimpson qluo aheilbut zufar roys tmmurali dragonrez jfr wnpx Ao_Li2007 lyndon bertelsen ellakat carlk
	Proteome survey reveals modularity of the yeast cell machinery [My Copy] Nature, Vol. 440, No. 7084. (22 January 2006), pp. 631-636. by Anne-Claude Gavin, Patrick Aloy, Paola Grandi, et al.Roland Krause, Markus Boesche, Martina Marzioch, Christina Rau, Lars J. Jensen, Sonja Bastuck, Birgit Dümpelfeld, Angela Edelmann, Marie-Anne Heurtier, Verena Hoffman, Christian Hoefert, Karin Klein, Manuela Hudak, Anne-Marie Michon, Malgorzata Schelder, Markus Schirle, Marita Remor, Tatjana Rudi, Sean Hooper, Andreas Bauer, Tewis Bouwmeester, Georg Casari, Gerard Drewes, Gitte Neubauer, Jens M. Rick, Bernhard Kuster, Peer Bork, Robert B. Russell, Giulio Superti-Furga posted to protein-interaction-network mass-spectrometry tap yeast by frohike on 2008-06-03 10:57:01 as along with 31 people and 10 groups aceol tomhebbron ajbattle mgomes Scis0000002 lawraga bicko saket Yanno ana Borelli lfriedl ccots jmeppley chad_davis balajis xico shantanu nirfriedman balabu dgront noano koller ruvido nicoleq lpfernandes phoenixzxl larsjuhljensen ellakat carlk ethkim structural_bioinformatics kdl MathBio Biostatistics Bioinformatics microRNA Computational_Systems_Biology EvolutionaryComputation Computational-Neurobiology WetBiology
	Global landscape of protein complexes in the yeast Saccharomyces cerevisiae [My Copy] Nature, Vol. 440, No. 7084. (22 March 2006), pp. 637-643. by Nevan J. Krogan, Gerard Cagney, Haiyuan Yu, et al.Gouqing Zhong, Xinghua Guo, Alexandr Ignatchenko, Joyce Li, Shuye Pu, Nira Datta, Aaron P. Tikuisis, Thanuja Punna, Josã© M. Peregrãn-Alvarez, Michael Shales, Xin Zhang, Michael Davey, Mark D. Robinson, Alberto Paccanaro, James E. Bray, Anthony Sheung, Bryan Beattie, Dawn P. Richards, Veronica Canadien, Atanas Lalev, Frank Mena, Peter Wong, Andrei Starostine, Myra M. Canete, James Vlasblom, Samuel Wu, Chris Orsi, Sean R. Collins, Shamanta Chandran, Robin Haw, Jennifer J. Rilstone, Kiran Gandi, Natalie J. Thompson, Gabe Musso, Peter St Onge, Shaun Ghanny, Mandy H. Y. Lam, Gareth Butland, Amin M. Altaf-Ul, Shigehiko Kanaya, Ali Shilatifard, Erin O'Shea, Jonathan S. Weissman, James C. Ingles, Timothy R. Hughes, John Parkinson, Mark Gerstein, Shoshana J. Wodak, Andrew Emili, Jack F. Greenblatt posted to protein-interaction-network mass-spectrometry tap yeast by frohike on 2008-06-03 10:56:19 as along with 30 people and 5 groups aceol mpotamias paccanarolab ajbattle mgomes jxl bicko cerca jiny Borelli lfriedl chad_davis balajis marcius tardigrade nirfriedman balabu j3xucite nickluscombe koller raiyar cjeans nicoleq Evangelia csaveanu carlk hplatero chasmand mapplab ethkim Paccanaro Lab kdl EBI-regulation BioinfoCIPF SGU-CIPF
	Functional organization of the yeast proteome by systematic analysis of protein complexes [My Copy] Nature, Vol. 415, No. 6868. (10 January 2002), pp. 141-147. by Anne-Claude Gavin, Markus Bosche, Roland Krause, et al.Paola Grandi, Martina Marzioch, Andreas Bauer, Jorg Schultz, Jens M. Rick, Anne-Marie Michon, Cristina-Maria Cruciat, Marita Remor, Christian Hofert, Malgorzata Schelder, Miro Brajenovic, Heinz Ruffner, Alejandro Merino, Karin Klein, Manuela Hudak, David Dickson, Tatjana Rudi, Volker Gnau, Angela Bauch, Sonja Bastuck, Bettina Huhse, Christina Leutwein, Marie-Anne Heurtier, Richard R. Copley, Angela Edelmann, Erich Querfurth, Vladimir Rybin, Gerard Drewes, Manfred Raida, Tewis Bouwmeester, Peer Bork, Bertrand Seraphin, Bernhard Kuster, Gitte Neubauer, Giulio Superti-Furga posted to protein-interaction-network yeast by frohike on 2008-06-03 10:55:32 as along with 24 people and 2 groups aceol carlk chica lawraga semin cerca taenneken adiel baaden dragonrez shivaram helenc lfriedl chad_davis balajis opheliav wnpx becarmson raiyar grahamc nicoleq iris_2001 csanford ethkim kdl steinmetzlab

Note: You may cite this page as: http://www.citeulike.org/user/frohike/tag/yeast

breast-cancer	247
microarray-data	95
microarray	89
bayesian-network	88
microarray-data-analysis	65
ovarian-cancer	61
proteomics	55
signature	49
arraycgh	45
database	39
network	38
prognosis	35
data-integration	35
microrna	31
pathway	31
mirna	29
snp	28
sequencing	27
regulatory-network	27
cnv	26
lung-cancer	25
mutation	24
preprocessing	23
clustering	23
oncology	23
alternative-splicing	22
integration	22
survival	22
epigenomics	21
cancer	21
affymetrix	21
biomarker	21
classification	21
human	19
mass-spectrometry	19
expo	19
methylation	18
tissue-specific	17
yeast	17
rectal-cancer	16
metastasis	16
metabolomics	16
svm	16
disease-network	15
gene	15
ppi	15
priors	15
seldi	14
gsea	14
regulatory	14
mirna-target-prediction	13
cetuximab	13
protein-interaction-network	13
second-generation-sequencing	13
methylome	12
tool	12
drug	12
disease	12
treatment	12
leukemia	12
systems-biology	11
brca1	11
meta-analysis	11
signatures	11
id-translation	11
geo	11
interaction	11
microarray-technology	10
module	10
protein	10
genetic	10
validation	10
online	10
omics	10
gene-expression	9
reverse-engineering-gene-network	9
outcome	9
bayesian	9
cdna	9
ismb2008	9
tumor	9
diagnosis	9
maldi	9
comment	9
transcription-factor	9
gene-network	8
colorectal-cancer	8
mutual-information	8
bayesian-network-extension	8
subtypes	8
egfr	8
cell-line	8
book	8
familial-ovarian-cancer	8
tissue	7
text-mining	7
metastases-signature	7
expression	7
clinical-microarray	7
clinical	7
technology	7
genomic	7
functional-enrichment	7
kernel	7
genome-wide-association	7
regression	7
multiple-testing	7
tp53	6
selection	6
colon-cancer	6
luminal	6
grade	6
personalized-medicine	6
statistics	6
theoretical	6
feature-selection	6
benchmark	6
inference	6
cgh	6
metastases	6
cdf	6
prm	6
therapy	6
cancer-unknown-origin	6
glioma	6
proliferation	6
profile	5
rma	5
genotype	5
liver	5
recurrence-score	5
sample-size-estimation	5
unsupervised	5
hypoxia	5
quality-control	5
roc	5
prognostic	5
lssvm	5
svd	5
iota	5
phenotype	5
hapmap	5
hprd	5
drug-network	5
21-gene	5
70-gene	5
visualization	5
colon	5
model	4
decision-tree	4
sam	4
kegg	4
vandevijver	4
causal	4
transcriptome	4
dynamic	4
hepatocellular-carcinoma	4
feature	4
chip-chip	4
molecular-classification	4
module-network	4
hcc	4
liver-cancer	4
gwa	4
cell-cycle	4
oncogene	4
p53	4
endometriosis	4
cosmic	4
estrogen-receptor	4
biclustering	4
connectivity-map	4
brain-cancer	4
eqtl	4
glioblastoma	4
flow-cytometry	4
oncomine	4
geneset	4
for:jfr	4
enrichment	4
ggi	4
cytoscape	4
brca2	4
bioconductor	4
myc	4
aracne	4
census	4
prostate-cancer	4
antibody-microarray	4
mirna-activity-score	3
map	3
bind	3
mouse	3
curve	3
motif_discovery	3
sequence	3
genome	3
criteria	3
stem-cell	3
six-genes-model	3
modularity	3
stroma	3
text-prior	3
histology	3
paired-samples	3
sampling	3
topology	3
somatic	3
wound-signature	3
intrinsic	3
metaphasecgh	3
genome-sequence	3
entropy	3
multi-cancer	3
mammaprint	3
postn	3
proteome	3
differential-equation	3
prioritization	3
pca	3
serum	3
76-gene	3
chromatin	3
intact	3
fdr	3
experimental-identification	3
graphical	3
java	3
transbig	3
e-coli	3
website	3
platin	3
vector	3
targetscan	3
literature	3
identification	3
exon	3
lung-metastasis	3
hmm	3
rectal	3
algorithms	3
false-discovery	3
phosphorylation	3
genetic-algorithm	3
lymphoma	3
text	3
basal	3
error	3
bayesian-integration	3
naive	3
platinum-resistance	3
roc-curve	3
epithelial-mesenchymal-transition	3
connectivity	3
protein-dna-interaction	3
regulatory-network-inference	3
prostate	3
ai	3
brca	3
experiment-design	3
bootstrap	3
perspective	3
her2	3
histone	3
hiv	2
plasma-proteome-project	2
death	2
leukemia_aml	2
il6	2
variance-filtering	2
standarization	2
multiclass	2
multi-scale-modeling	2
msigdb-geneset	2
pictar	2
pc-algoritme	2
gallen	2
go	2
module-map	2
psb	2
knock-out-experiments	2
atlas	2
interleukin	2
signaling	2
conventional	2
solid-tumors	2
pptc	2
tailorx	2
tumor-suppressor	2
t-test	2
phylogeny	2
index	2
tcga	2
st	2
utr	2
miranda	2
rate	2
benign	2
malignant	2
masses	2
prior	2
differential-expression	2
apc	2
promoter_elements	2
machine-learning	2
non-parametric	2
estrogen	2
classifiers	2
kinase	2
pancreas	2
structure	2
learning	2
area-under-roc-curve	2
network-analysis	2
sporadic	2
dynamic-bayesian-network	2
logistic	2
r-package	2
crohn	2
bingo	2
cytoscape-plugin	2
cancer-data	2
liquid-chromatography	2
mmp-9	2
bladder-cancer	2
influence-score	2
solexa	2
mint	2
normal	2
nbr1	2
intrinsic-genes	2
wikipathways	2
amsterdam	2
context	2
for:pkonings	2
graph	2
lasso	2
fibroblast	2
passenger-mutation	2
feature-dependence	2
hox	2
discretization	2
cancer-network	2
biology	2
endometrial	2
nearest-neighbor	2
silac	2
epistasis	2
ode	2
database-genomic-variants	2
annotation	2
loss	2
tensor	2
tap	2
platinum	2
ovacheck	2
tiling-microarray	2
randomization	2
protein-kinase	2
metabolism	2
oral-cancer	2
anova	2
ca125	2
overfitting	2
comparativecgh	2
pregnancies	2
ann	2
biopax	2
performance	2
normalization	2
for:lthorrez	2
non-coding-rna	2
hupo	2
clinical-trial	2
trial	2
nobel-prize	2
cost	2
ncbi	2
vegf	2
syntren	2
mas5	2
robo1	2
psb2008	2
aberration	2
permutation	2
normal-expression	2
chemo	2
synergy	2
interactome	2
variable	2
prediction	2
gcrma	2
itraq	2
kras	2
robustness	2
hepatology	2
drug-response-prediction	2
imaging	2
first-maldi	2
aml	2
r	2
transcriptomics	2
maqc	2
therapy-response	2
recurrent	2
cgap	2
fold-change	2
medical-decision-support	2
epidemiology	2
bias	2
editorial	2
motif	2
gaussian_models	2
neuroblastoma	1
translocation	1
coding-sequence	1
translational-medicine	1
values	1
probabilistic	1
seed-and-soil	1
set	1
signs	1
nottingham	1
tamoxifen	1
phd	1
markov-blanket	1
post-translational-modification	1
confidence-measure	1
histological_types	1
sequence-venter	1
multivariate	1
tree	1
evolution	1
biosynthesis	1
molecular-biology	1
monosomy	1
fuzzy	1
ras	1
read-mapping	1
frequentist	1
extension	1
squamous	1
luminex	1
latent_variable_model	1
globaltest	1
pearson-correlation	1
ophid	1
hypothesis	1
ras-pathway	1
hopach	1
3utr	1
inactivation	1
multivariate-discretization	1
pet	1
kras-mutation	1
first-esi	1
signature-candidate	1
graph-notation	1
oncomap	1
q2	1
insurance	1
1kb-cnv	1
pten	1
splicing-machinery	1
killer	1
rt-pcr	1
human-proteome	1
porter	1
project	1
oncogene-addiction	1
support	1
wisp1	1
population	1
cancer-signaling	1
reproducible_research	1
gel-proteomics	1
simpleaffy	1
phd-geert-fannes	1
side-effect	1
overtreatment	1
primer	1
compendium	1
cross-validation	1
epithelial	1
directional	1
resistance	1
non-negative-matrix-factorization	1
acads	1
spacc	1
logistic-regression	1
reference-methylome	1
logic	1
class-prediction	1
spectral_analysis	1
corrigendum	1
adm	1
colorectal	1
bacterial	1
fbxo31	1

frohike's yeast [17 articles] Export

frohike's tags