ghattem's chip-seq [10 articles] Export Sort

Recent papers added to ghattem's library classified by the tag chip-seq. You can also see everyone's chip-seq.

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	A Hierarchy of H3K4me3 and H3K27me3 Acquisition in Spatial Gene Regulation in Xenopus Embryos [My Copy] Developmental Cell, Vol. 17, No. 3. (15 September 2009), pp. 425-434. by Robert C. Akkers, Simon J. van Heeringen, Ulrike G. Jacobi, et al.Eva M. Janssen-Megens, Kees-Jan Françoijs, Hendrik G. Stunnenberg, Gert J. Veenstra posted to rna-seq chip-seq by ghattem on 2009-09-21 20:09:04 as along with 2 people and 1 group fenghezi inesdesantiago SIMR bioinformatics
	A clustering approach for identification of enriched domains from histone modification ChIP-Seq data [My Copy] Bioinformatics, Vol. 25, No. 15. (1 August 2009), pp. 1952-1958. by Chongzhi Zang, Dustin E. Schones, Chen Zeng, Kairong Cui, Keji Zhao, Weiqun Peng posted to chip-seq by ghattem on 2009-06-23 19:17:00 as along with 12 people and 2 groups hzoltan hagechouchin443 ashraya stubrown cassj guhjy humburg ewilban1 gdb inesdesantiago fenghezi polivares SIMR bioinformatics BergmanLab
	PeakSeq enables systematic scoring of ChIP-seq experiments relative to controls. [My Copy] Nature biotechnology, Vol. 27, No. 1. (04 January 2009), pp. 66-75. by Joel Rozowsky, Ghia Euskirchen, Raymond K. Auerbach, et al.Zhengdong D. Zhang, Theodore Gibson, Robert Bjornson, Nicholas Carriero, Michael Snyder, Mark B. Gerstein posted to chip-seq peak_finding software by ghattem on 2009-01-27 15:24:04 as along with 19 people and 1 group bedo hzoltan fpattyn gdb huali ewilban1 fenghezi smiddha jfr bertelsen JeremyZucker cassj inesdesantiago dakelley abizar polivares idonaldson WanderingAengus guhjy SIMR bioinformatics
	GPAT: retrieval of genomic annotation from large genomic position datasets. [My Copy] BMC bioinformatics, Vol. 9, No. 1. (2008) by A. Krebs, M. Frontini, L. Tora posted to chip-chip chip-seq software by ghattem on 2008-12-19 14:42:49 as along with 5 people and 1 group guhjy abizar druvus fhalbrit neils SIMR bioinformatics
	Empirical methods for controlling false positives and estimating confidence in ChIP-Seq peaks [My Copy] BMC Bioinformatics, Vol. 9, No. 1. (2008), 523. by David Nix, Samir Courdy, Kenneth Boucher posted to chip-seq by ghattem on 2008-12-10 20:12:37 as along with 9 people and 2 groups darian gdb slv23 inesdesantiago ewilban1 floatingpoint WanderingAengus magusina caseybrown Bioinformatics - CRUK SIMR bioinformatics
	Design and analysis of ChIP-seq experiments for DNA-binding proteins [My Copy] Nature Biotechnology, Vol. 26, No. 12. (16 November 2008), pp. 1351-1359. by Peter V. Kharchenko, Michael Y. Tolstorukov, Peter J. Park posted to chip-seq by ghattem on 2008-12-04 16:23:25 as along with 20 people and 2 groups oannes hzoltan stubrown guhjy gdb tonamswish ewilban1 coela ekotelnikova jfr floatingpoint idonaldson inesdesantiago WanderingAengus vplagnol xwbcn fpattyn mutagenic kengg rschulz KCL & UCL Bioinformatics SIMR bioinformatics
	Model-based Analysis of ChIP-Seq (MACS) [My Copy] Genome Biology, Vol. 9, No. 9. (2008), R137. by Yong Zhang, Tao Liu, Clifford Meyer, et al.Jerome Eeckhoute, David Johnson, Bradley Bernstein, Chad Nussbaum, Richard Myers, Myles Brown, Wei Li, X. Shirley Liu posted to chip-seq illumina1g solexa by ghattem on 2008-10-24 20:02:29 as along with 25 people and 2 groups torfinnnome hzoltan Vincent_Rouilly darian stubrown mkiyer humburg cassj floatingpoint WanderingAengus bryankr jfr rschulz mcm polivares gdb yadadi djkt stajich mdperry fpattyn bcondon idonaldson caseybrown kengg SIMR bioinformatics Mycology
	High-Resolution Profiling of Histone Methylations in the Human Genome [My Copy] Cell, Vol. 129, No. 4. (18 May 2007), pp. 823-837. by A. Barski, S. Cuddapah, K. Cui, et al.T. Roh, D. Schones, Z. Wang, G. Wei, I. Chepelev, K. Zhao posted to chip-seq illumina1g solexa by ghattem on 2007-07-13 15:48:08 as along with 24 people and 2 groups viren4388 antonkratz rsaito darian tonamswish stubrown fpattyn hagechouchin443 absterga ewilban1 suizifish jochenG caseybrown raylim jernst giovenko guhjy kengg sebastien_vigneau jackjackjjj epigenetics ksha inesdesantiago dquest JLab Plantandetc
	Genome-wide profiles of STAT1 DNA association using chromatin immunoprecipitation and massively parallel sequencing [My Copy] Nature Methods, Vol. 4, No. 8. (11 June 2007), pp. 651-657. by Gordon Robertson, Martin Hirst, Matthew Bainbridge, et al.Misha Bilenky, Yongjun Zhao, Thomas Zeng, Ghia Euskirchen, Bridget Bernier, Richard Varhol, Allen Delaney, Nina Thiessen, Obi L. Griffith, Ann He, Marco Marra, Michael Snyder, Steven Jones posted to chip-seq by ghattem on 2007-07-13 15:43:49 as along with 14 people and 1 group bedo absterga samanthacooper stubrown ewilban1 fpattyn polivares caseybrown guhjy vega kengg slevy03 dquest raiyar Plantandetc
	Genome-Wide Mapping of in Vivo Protein-DNA Interactions [My Copy] Science, Vol. 316, No. 5830. (8 June 2007), pp. 1497-1502. by David S. Johnson, Ali Mortazavi, Richard M. Myers, Barbara Wold posted to chip-seq by ghattem on 2007-07-13 15:43:26 as along with 24 people and 5 groups oannes daforerog tonamswish ewilban1 aprasad jo_davies aalibes balicea andersbj JeremyZucker aswin kengg giovanni cjeans zwang epigenetics biomcgary george_g cabbagezs Jporci blobbybirdman caseybrown emptyhb dquest Bioinformatics microRNA Marcotte_Lab UH - Computational Biology Myxo group

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microarray	136
affymetrix	55
encode	24
qc	13
clustering	11
rna-seq	11
chip-seq	10
nextgen_sequencing	10
chip-chip	9
time_series	8
solexa	7
software	6
alignment_tool	6
cross-species	6
pca	6
454seq	6
ica	5
bootstrap	5
alternative_splicing	4
normalization	4
classification	3
gene_ontology	3
chicken	3
cyclic_genes	2
illumina1g	2
custom_cdf	2
literature_mining	2
digital_gene_expression	2
bioconductor	2
database	2
probeset	2
neural_crest	1
proteomics	1
sage	1
rma	1
svm	1
p53	1
svd	1
anova	1
phylogeny	1
annotation	1
protein_stabilization	1
tcof1	1
treacher_collins_syndrome	1
gene_networks	1
mds	1
peak_finding	1
owl	1
biological_networks	1
gene_set	1
hox	1
genetic_algorithm	1
sbml	1
tiling_array	1
flow_cytometry	1
hypergeometric	1
orthologues	1
rna_degradation	1
differential_expression	1
multiple_testing	1
snp	1

ghattem's chip-seq [10 articles] Export Sort

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