gjuggler's goldmanlab [23 articles] Export

Recent papers added to gjuggler's library classified by the tag goldmanlab. You can also see everyone's goldmanlab.

	Genomic DNA k-mer spectra: models and modalities [My Copy] Genome Biology, Vol. 10, No. 10. (2009), R108. by Benny Chor, David Horn, Nick Goldman, Yaron Levy, Tim Massingham posted to goldmanlab by gjuggler on 2009-10-08 11:05:49 as along with 3 people and 1 group djkt TRHvidsten medic0747 iSEEM
	Phylogenetics by likelihood: Evolutionary modeling as a tool for understanding the genome [My Copy] Journal of Biomedical Informatics In Phylogenetic Inferencing: Beyond Biology, Vol. 39, No. 1. (February 2006), pp. 51-61. by C. Kosiol, L. Bofkin, S. Whelan posted to e-slr goldmanlab by gjuggler on 2009-06-05 11:34:43 as along with 4 people katholt aprasad akifumi BioNica
	First Year Report [My Copy] (October 2004) by Fabio Pardi posted to goldmanlab by gjuggler on 2009-02-04 14:29:25 as
	Evolutionary footprints of nucleosome positions in yeast. [My Copy] Trends in genetics : TIG, Vol. 24, No. 12. (24 October 2008), pp. 583-587. by S. Washietl, R. Machne, N. Goldman posted to goldmanlab by gjuggler on 2008-12-04 14:54:20 as along with 4 people bpcusack ilyashl gderwin djkt
	Models of Molecular Evolution and Phylogeny [My Copy] Genome Research, Vol. 8, No. 12. (1 December 1998), pp. 1233-1244. by P. Liò, N. Goldman posted to goldmanlab by gjuggler on 2008-12-01 10:59:14 as along with 5 people seb1 BioNica operon hdopazo timflutre
	Combining protein evolution and secondary structure. [My Copy] Mol Biol Evol, Vol. 13, No. 5. (May 1996), pp. 666-673. by J. L. Thorne, N. Goldman, D. T. Jones posted to goldmanlab by gjuggler on 2008-11-19 14:05:39 as along with 2 people chrn tale
	Phylogeny-Aware Gap Placement Prevents Errors in Sequence Alignment and Evolutionary Analysis [My Copy] Science, Vol. 320, No. 5883. (20 June 2008), pp. 1632-1635. by Ari Loytynoja, Nick Goldman posted to goldmanlab by gjuggler on 2008-06-20 13:17:30 as along with 29 people and 3 groups memerman operon TRHvidsten BioNica cmzmasek timflutre pradiptaray alexeid marti bpcusack hpaces dinnes djkt ArtemPankin phoenixzxl jago marck imtechnology aprasad zwang bmaust bpb michaelbarton Schmidtc AbnerCYH gulsacan emptyhb jlgreen nuin Khavkin's lab iSEEM Green Lab
	The Transcriptional Landscape of the Mammalian Genome [My Copy] Science, Vol. 309, No. 5740. (2 September 2005), pp. 1559-1563. by P. Carninci, ..., M. S. Taylor, ..., Y. Hayashizaki posted to goldmanlab tss by gjuggler on 2008-01-18 14:08:43 as along with 19 people and 1 group hagechouchin443 daforerog guhjy myrtilus setar miguel Cortel jwortman jfr tuck lyongu eckart_bindewald troels_marstrand kaspermunch balicea forbiddenfaith99 mtagaya olympos raylim Bioinformatics
	Simple diagnostic statistical tests of models for DNA substitution. [My Copy] J Mol Evol, Vol. 37, No. 6. (December 1993), pp. 650-661. by N. Goldman posted to goldmanlab nopdf by gjuggler on 2008-01-09 12:37:54 as
	Comparison of models for nucleotide substitution used in maximum-likelihood phylogenetic estimation. [My Copy] Mol Biol Evol, Vol. 11, No. 2. (March 1994), pp. 316-324. by Z. Yang, N. Goldman, A. Friday posted to goldmanlab by gjuggler on 2008-01-09 12:36:21 as
	A codon-based model of nucleotide substitution for protein-coding DNA sequences [My Copy] Mol Biol Evol, Vol. 11, No. 5. (1 September 1994), pp. 725-736. by N. Goldman, Z. Yang posted to goldmanlab by gjuggler on 2008-01-09 12:35:52 as along with 7 people and 1 group MRCBIRD hdopazo BioNica usagi-kirin mingzhi AtoZ CharlesM BioinfoCIPF
	Codon-Substitution Models for Heterogeneous Selection Pressure at Amino Acid Sites [My Copy] Genetics, Vol. 155, No. 1. (1 May 2000), pp. 431-449. by Ziheng Yang, Rasmus Nielsen, Nick Goldman, A. M. Pedersen posted to e-slr goldmanlab by gjuggler on 2008-01-09 12:33:40 as along with 8 people druvus fernan BioNica Natasha dylan77 Garamonfok tale emptyhb
	A general empirical model of protein evolution derived from multiple protein families using a maximum-likelihood approach. [My Copy] Molecular biology and evolution, Vol. 18, No. 5. (1 May 2001), pp. 691-699. by Simon Whelan, Nick Goldman posted to goldmanlab by gjuggler on 2008-01-09 12:32:47 as along with 7 people calderonv BioNica michaelbarton bpb chrn ssgong gisle
	Molecular phylogenetics: state-of-the-art methods for looking into the past. [My Copy] Trends Genet, Vol. 17, No. 5. (May 2001), pp. 262-272. by S. Whelan, P. Liò, N. Goldman posted to goldmanlab by gjuggler on 2008-01-09 12:32:33 as along with 1 person aprasad
	A novel use of equilibrium frequencies in models of sequence evolution. [My Copy] Mol Biol Evol, Vol. 19, No. 11. (November 2002), pp. 1821-1831. by N. Goldman, S. Whelan posted to goldmanlab by gjuggler on 2008-01-09 12:30:55 as
	Covariation in frequencies of substitution, deletion, transposition, and recombination during eutherian evolution. [My Copy] Genome Res, Vol. 13, No. 1. (January 2003), pp. 13-26. by R. C. Hardison, K. M. Roskin, S. Yang, et al.M. Diekhans, W. J. Kent, R. Weber, L. Elnitski, J. Li, M. O'Connor, D. Kolbe, S. Schwartz, T. S. Furey, S. Whelan, N. Goldman, A. Smit, W. Miller, F. Chiaromonte, D. Haussler posted to goldmanlab by gjuggler on 2008-01-09 12:29:47 as along with 2 people maximilianh timflutre
	Phylogenomics and bioinformatics of SARS-CoV. [My Copy] Trends Microbiol, Vol. 12, No. 3. (March 2004), pp. 106-111. by P. Liò, N. Goldman posted to goldmanlab by gjuggler on 2008-01-09 12:28:05 as
	Estimating the frequency of events that cause multiple-nucleotide changes. [My Copy] Genetics, Vol. 167, No. 4. (August 2004), pp. 2027-2043. by S. Whelan, N. Goldman posted to goldmanlab by gjuggler on 2008-01-09 12:27:35 as along with 2 people robsyme michaelbarton
	Accuracy and power of statistical methods for detecting adaptive evolution in protein coding sequences and for identifying positively selected sites. [My Copy] Genetics, Vol. 168, No. 2. (1 October 2004), pp. 1041-1051. by Wendy S. Wong, Ziheng Yang, Nick Goldman, Rasmus Nielsen posted to goldmanlab by gjuggler on 2008-01-09 12:27:18 as along with 6 people katholt renewang BioNica Natasha timflutre CharlesM
	From The Cover: An algorithm for progressive multiple alignment of sequences with insertions [My Copy] PNAS, Vol. 102, No. 30. (26 July 2005), pp. 10557-10562. by Ari Loytynoja, Nick Goldman posted to goldmanlab by gjuggler on 2008-01-09 12:26:42 as along with 8 people and 1 group Thaverkamp BioNica federico_boschetti stevanspringer timflutre hpaces dgront bpcusack FAB-lab
	Variation in evolutionary processes at different codon positions. [My Copy] Mol Biol Evol, Vol. 24, No. 2. (February 2007), pp. 513-521. by L. Bofkin, N. Goldman posted to goldmanlab by gjuggler on 2008-01-09 12:25:43 as
	An Empirical Codon Model for Protein Sequence Evolution [My Copy] Mol Biol Evol, Vol. 24, No. 7. (1 July 2007), pp. 1464-1479. by Carolin Kosiol, Ian Holmes, Nick Goldman posted to goldmanlab by gjuggler on 2008-01-09 12:25:24 as along with 3 people aprasad BioNica cjeans
	Experimental design criteria in phylogenetics: where to add taxa. [My Copy] Syst Biol, Vol. 56, No. 4. (August 2007), pp. 609-622. by K. Geuten, T. Massingham, P. Darius, E. Smets, N. Goldman posted to goldmanlab nopdf by gjuggler on 2008-01-09 12:24:27 as along with 1 person akifumi

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e-slr	109
general	44
phylogenetics	29
goldmanlab	23
phylowidget	23
palindromes	22
isochores	21
nopdf	21
08-smbe	19
test	19
tss-breadth	19
tss	18
alignment	17
alngen	15
dupldiv	15
mutation	14
splicing	12
ultraconserved	11
indels	10
annotation	9
mutsel	9
tac-1	8
proteins	7
evo-rate	6
pseudogenes	5
books	4
bp2009	4
visualization	4
cyt-b	3
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sync-test	3
docs	2
epidemiology	2
gersteinlab	2
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gjuggler's goldmanlab [23 articles] Export

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