gpappas's library 37 articles Export

	Characterization of Aspergillus flavus strains from Brazilian Brazil nuts and cashew by RAPD and ribosomal DNA analysis [My Copy] Letters in Applied Microbiology, Vol. 47, No. 1. (July 2008), pp. 12-18. by Midorikawa, G.E.O., Pinheiro, et al. M.R.R., Vidigal, B.S., Arruda, M.C., Costa, F.F., Pappas, G.J., Ribeiro, S.G., Freire, F., Miller, R.N.G. posted to aflatoxin georgios rrna by gpappas on 2008-10-31 20:17:15 as
	The generation challenge programme platform: semantic standards and workbench for crop science. [My Copy] International journal of plant genomics, Vol. 2008 (2008), 369601. by R. Bruskiewich, M. Senger, G. Davenport, et al.M. Ruiz, M. Rouard, T. Hazekamp, M. Takeya, K. Doi, K. Satoh, M. Costa, R. Simon, J. Balaji, A. Akintunde, R. Mauleon, S. Wanchana, T. Shah, M. Anacleto, A. Portugal, V. J. Ulat, S. Thongjuea, K. Braak, S. Ritter, A. Dereeper, M. Skofic, E. Rojas, N. Martins, G. Pappas, R. Alamban, R. Almodiel, L. H. Barboza, J. Detras, K. Manansala, M. J. Mendoza, J. Morales, B. Peralta, R. Valerio, Y. Zhang, S. Gregorio, J. Hermocilla, M. Echavez, J. M. Yap, A. Farmer, G. Schiltz, J. Lee, T. Casstevens, P. Jaiswal, A. Meintjes, M. Wilkinson, B. Good, J. Wagner, J. Morris, D. Marshall, A. Collins, S. Kikuchi, T. Metz, G. Mclaren, T. van Hintum posted to gcp georgios java by gpappas on 2008-10-05 16:57:16 as along with 1 person druvus
	Molecular phylogenetic diversity of bacteria associated with soil of the savanna-like Cerrado vegetation [My Copy] Microbiological Research (26 February 2007) by B. Quirino, G. Pappas, A. Tagliaferro, et al.R. Collevatti, E. Neto, M. Dasilva, M. Bustamante, R. Kruger posted to bacteria cerrado georgios metagenomics by gpappas on 2008-10-05 16:55:07 as
	Diversity of soil fungal communities of Cerrado and its closely surrounding agriculture fields [My Copy] Archives of Microbiology, Vol. 190, No. 2. (August 2008), pp. 129-139. by Castro, Alinne, Quirino, et al. Betania, Pappas, Georgios, Kurokawa, Adriane, Neto, Eduardo, Kruger, Ricardo posted to cerrado georgios metagenomics by gpappas on 2008-10-05 16:54:28 as
	ConSSeq: a web-based application for analysis of amino acid conservation based on HSSP database and within context of structure [My Copy] Bioinformatics, Vol. 20, No. 12. (12 August 2004), pp. 1983-1985. by R. H. Higa, A. J. Montagner, R. C. Togawa, et al.P. R. Kuser, M. E. B. Yamagishi, A. L. Mancini, G. Pappas, R. T. Miura, L. G. Horita, G. Neshich posted to consseq georgios java by gpappas on 2008-10-05 16:52:43 as
	STING Millennium: a web-based suite of programs for comprehensive and simultaneous analysis of protein structure and sequence [My Copy] Nucl. Acids Res., Vol. 31, No. 13. (1 July 2003), pp. 3386-3392. by Goran Neshich, Roberto C. Togawa, Adauto L. Mancini, et al.Paula R. Kuser, Michel E. Yamagishi, Georgios Pappas, Wellington V. Torres, Tharsis F. Campos, Leonardo L. Ferreira, Fabio M. Luna, Adilton G. Oliveira, Ronald T. Miura, Marcus K. Inoue, Luiz G. Horita, Dimas F. de Souza, Fabiana Dominiquini, Alexandre Alvaro, Cleber S. Lima, Fabio O. Ogawa, Gabriel B. Gomes, Juliana F. Palandrani, Dos, Esther M. de Freitas, Amanda R. Mattiuz, Ivan C. Costa, Celso L. de Almeida, Savio Souza, Christian Baudet, Roberto H. Higa posted to georgios java protein by gpappas on 2008-10-05 16:50:53 as
	A large scale analysis of resistance gene homologues in Arachis [My Copy] Molecular Genetics and Genomics, Vol. 270, No. 1. (2003), pp. 34-45. by D. Bertioli, S. Leal-Bertioli, M. Lion, et al.V. Santos, G. Pappas, S. Cannon, P. Guimarães posted to arachis georgios rga by gpappas on 2008-10-05 16:48:35 as
	Expressed sequence tags from the plant trypanosomatid Phytomonas serpens [My Copy] Molecular and Biochemical Parasitology, Vol. 142, No. 2. (August 2005), pp. 149-157. by G. J. Pappas, K. Benabdellah, B. Zingales, A. Gonzalez posted to est georgios phytomonas by gpappas on 2008-10-05 16:45:25 as
	Analysis of the Effects of Multiple Sequence Alignments in Protein Secondary Structure Prediction [My Copy] Advances in Bioinformatics and Computational Biology (2005), pp. 128-140. by Pappas, Shankar Subramaniam posted to georgios prediction protein secondary structure by gpappas on 2008-10-05 16:35:58 as
	SisGen: A CORBA–Based Data Management Program for DNA Sequencing Projects [My Copy] Data Integration in the Life Sciences (2008), pp. 116-123. by Georgios Pappas, Robson Miranda, Natália Martins, Roberto Togawa, Marcos Costa posted to annotation corba dils_2008 est georgios java by gpappas on 2008-10-05 16:33:58 as
	High-throughput gene and SNP discovery in Eucalyptus grandis, an uncharacterized genome [My Copy] BMC Genomics, Vol. 9, No. 1. (2008) by Evandro Novaes, Derek Drost, William Farmerie, et al.Georgios Pappas, Dario Grattapaglia, Ronald Sederoff, Matias Kirst posted to 454 est eucalyptus by gpappas on 2008-06-30 15:38:40 as along with 4 people and 1 group semrich natstreet GustavoLacerda neils Notre Dame Bioinformatics
	CAP3: A DNA Sequence Assembly Program [My Copy] Genome Research, Vol. 9, No. 9. (1 September 1999), pp. 868-877. by Xiaoqiu Huang, Anup Madan posted to software by gpappas on 2008-05-16 00:31:41 as along with 5 people nwpuzebra n00c Neeperando dakelley dmp
	BLAT--the BLAST-like alignment tool. [My Copy] Genome research, Vol. 12, No. 4. (1 April 2002), pp. 656-664. by W. James Kent posted to software by gpappas on 2008-05-16 00:03:49 as along with 37 people and 3 groups azazello rshe dchughes rdowell gwallau druvus aprasad maria_hauser n00c sficklin Thaverkamp cpwardell daveGerrard coela daforerog pwais umit mmartin paszkows operon miguel pcahan1 Ayest indigoviolet mtagaya treangen michC djkt timflutre olympos cjeans wenhan natstreet antonkratz yoanjacquemin talponer bozdagd LabDros BergmanLab EisenLab
	Multi-objective Genetic Algorithm Based Clustering Approach and Its Application to Gene Expression Data [My Copy] Advances in Information Systems (2005), pp. 451-461. by Tansel Özyer, Yimin Liu, Reda Alhajj, Ken Barker posted to expression sage statistics by gpappas on 2008-05-12 01:38:20 as
	Tag-based approaches for transcriptome research and genome annotation. [My Copy] Nature methods, Vol. 2, No. 7. (July 2005), pp. 495-502. by M. Harbers, P. Carninci posted to review sage by gpappas on 2008-05-05 00:40:57 as along with 5 people amiezoul jbhiatt bertelsen guhjy xiaobeizhao
	Clustering analysis of SAGE data using a Poisson approach [My Copy] Genome Biology, Vol. 5, No. 7. (2004) by Li Cai, Haiyan Huang, Seth Blackshaw, Jun Liu, Connie Cepko, Wing Wong posted to clustering sage statistics by gpappas on 2008-05-05 00:36:12 as
	Accessing and distributing EMBL data using CORBA (common object request broker architecture). [My Copy] Genome Biol, Vol. 1, No. 5. (2000) by L. Wang, P. Rodriguez-Tomé, N. Redaschi, P. McNeil, A. Robinson, P. Lijnzaad posted to corba databases dils_2008 by gpappas on 2008-02-27 22:50:29 as along with 1 person orzenil
	A general approach to single-nucleotide polymorphism discovery [My Copy] Nat Genet, Vol. 23, No. 4. (December 1999), pp. 452-456. by Gabor T. Marth, Ian Korf, Mark D. Yandell, et al.Raymond T. Yeh, Zhijie Gu, Hamideh Zakeri, Nathan O. Stitziel, Ladeana Hillier, Pui-Yan Kwok, Warren R. Gish posted to dils_2008 polybayes snp by gpappas on 2008-02-27 22:07:14 as along with 4 people and 1 group n00c Ayest azazello farhat gatech-compgenomics
	Genetic variation and recombination of RdRp and HSP 70h genes of Citrus tristeza virus isolates from orange trees showing symptoms of citrus sudden death disease [My Copy] Virology Journal, Vol. 5 (16 January 2008), 9. by Clarissa P. C. Gomes, Tatsuya Nagata, Waldir C. de Jesus, Carlos R. Borges, Georgios J. Pappas, Darren P. Martin posted to citrus_sudden_death ctv georgios by gpappas on 2008-02-08 21:32:16 as
	Accuracy and quality of massively parallel DNA pyrosequencing [My Copy] Genome Biology, Vol. 8, No. 7. (20 July 2007), R143. by Susan Huse, Julie Huber, Hilary Morrison, Mitchell Sogin, David Welch posted to comparative_genomics by gpappas on 2008-02-01 19:21:23 as along with 18 people and 3 groups darian nfparrish druvus n00c jlgreen Thaverkamp orzenil mmartin floatingpoint Huub_odc jmeppley mblwhoi grahamc azazello GustavoLacerda blobbybirdman Olaf_Ilzins bozdagd iSEEM Bioinformatics gatech-compgenomics
	A gene in the multidrug and toxic compound extrusion (MATE) family confers aluminum tolerance in sorghum [My Copy] Nature Genetics, Vol. 39, No. 9. (26 August 2007), pp. 1156-1161. by Jurandir V. Magalhaes, Jiping Liu, Claudia T. Guimarães, et al.Ubiraci G. P. Lana, Vera M. C. Alves, Yi-Hong Wang, Robert E. Schaffert, Owen A. Hoekenga, Miguel A. Piñeros, Jon E. Shaff, Patricia E. Klein, Newton P. Carneiro, Cintia M. Coelho, Harold N. Trick, Leon V. Kochian posted to cnpq_transposon jurandir mite sorghum by gpappas on 2008-01-31 12:11:31 as along with 1 person viktor21614
	Gene duplication and exon shuffling by helitron-like transposons generate intraspecies diversity in maize. [My Copy] Nat Genet (31 July 2005) by Michele Morgante, Stephan Brunner, Giorgio Pea, Kevin Fengler, Andrea Zuccolo, Antoni Rafalski posted to cnpq_transposon helitrons by gpappas on 2008-01-31 12:03:26 as along with 3 people and 2 groups ushishir bsmagic ArtemPankin Bioinformatics bioinplant
	Origin and Evolution of Human microRNAs From Transposable Elements [My Copy] Genetics, Vol. 176, No. 2. (1 June 2007), pp. 1323-1337. by Jittima Piriyapongsa, Leonardo Marino-Ramirez, I. King Jordan posted to mirna transposons by gpappas on 2008-01-31 11:55:22 as along with 9 people and 5 groups tonamswish daforerog coldmeadow tardigrade andersbj dchughes mtagaya cisevol emptyhb microRNA G4ID Genetics-of-Gambling cis-regulatory-evolution BergmanLab
	Rolling-circle transposons in eukaryotes. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 98, No. 15. (17 July 2001), pp. 8714-8719. by V. V. Kapitonov, J. Jurka posted to cnpq_transposon helitrons by gpappas on 2008-01-31 11:40:59 as along with 3 people and 1 group timflutre thegoose2 tharris C. elegans / WormBase
	Conserved eukaryotic transposable elements and the evolution of gene regulation. [My Copy] Cell Mol Life Sci (20 November 2007) by J Jurka posted to cnpq_transposon review transposons by gpappas on 2008-01-31 11:39:17 as along with 5 people and 2 groups dchughes Stew maximilianh cisevol idonaldson cis-regulatory-evolution BergmanLab
	Helitrons on a roll: eukaryotic rolling-circle transposons. [My Copy] Trends Genet, Vol. 23, No. 10. (October 2007), pp. 521-529. by V. V. Kapitonov, J. Jurka posted to cnpq_transposon helitrons by gpappas on 2008-01-31 11:38:42 as along with 2 people and 1 group thegoose2 tharris C. elegans / WormBase
	Plant LTR-retrotransposons and MITEs: control of transposition and impact on the evolution of plant genes and genomes. [My Copy] Gene, Vol. 311 (5 June 2003), pp. 1-11. by J. M. Casacuberta, N. Santiago posted to cnpq_transposon ltr mite review transposons by gpappas on 2008-01-30 19:47:52 as along with 2 people and 1 group saru cisevol BergmanLab
	Using rice to understand the origin and amplification of miniature inverted repeat transposable elements (MITEs). [My Copy] Curr Opin Plant Biol, Vol. 7, No. 2. (April 2004), pp. 115-119. by N. Jiang, C. Feschotte, X. Zhang, S. R. Wessler posted to cnpq_transposon mite review transposons by gpappas on 2008-01-30 19:46:10 as
	Analysis of non-TIR NBS-LRR resistance gene analogs in Musa acuminata Colla: Isolation, RFLP marker development, and physical mapping [My Copy] BMC Plant Biology, Vol. 8, No. 1. (2008) by Robert Miller, David Bertioli, Franc Baurens, et al.Candice Santos, Paulo Alves, Natalia Martins, Roberto Togawa, Manoel Souza, Georgios Pappas posted to georgios musa rga by gpappas on 2008-01-30 18:24:18 as along with 1 person natalia_martins
	The necessary junk: new functions for transposable elements [My Copy] Hum. Mol. Genet., Vol. 16, No. R2. (15 October 2007), pp. R159-167. by Alysson R. Muotri, Maria C. N. Marchetto, Nicole G. Coufal, Fred H. Gage posted to cnpq_transposon review transposons by gpappas on 2008-01-30 17:47:11 as along with 7 people and 2 groups operon TimRooney sbottani andreasapostolides dchughes RaquelSL ArtemPankin BergmanLab Khavkin's lab
	Insights into the Musa genome: syntenic relationships to rice and between Musa species [My Copy] BMC Genomics, Vol. 9, No. 1. (2008) by Magali Lescot, Pietro Piffanelli, Ana Ciampi, et al.Manuel Ruiz, Guillaume Blanc, Jim L. Mack, Felipe da Silva, Candice Santos, Angelique D'Hont, Olivier Garsmeur, Alberto Vilarinhos, Hiroyuki Kanamori, Takashi Matsumoto, Catherine Ronning, Foo Cheung, Brian Haas, Ryan Althoff, Tammy Arbogast, Erin Hine, Georgios Pappas, Takuji Sasaki, Manoel Souza, Robert Miller, Jean C. Glaszmann, Chris Town posted to bac georgios musa by gpappas on 2008-01-30 14:31:44 as along with 1 person dandaman
	The Significance of Digital Gene ExpressionâProfiles [My Copy] Genome Research, Vol. 7, No. 10. (1 October 1997), pp. 986-995. by StÃ©phane Audic, Jean-Michel Claverie posted to cnpq_transposon ddd differential est expression by gpappas on 2008-01-30 14:17:48 as along with 5 people heliopais cajunsushi jmeppley dandaman fhalbrit
	Frequencies of Ty1- copia and Ty3- gypsy retroelements within the Triticeae EST databases. [My Copy] Theor Appl Genet, Vol. 104, No. 5. (April 2002), pp. 840-844. by V. Echenique, B. Stamova, P. Wolters, G. Lazo, L. Carollo, J. Dubcovsky posted to cnpq_transposon by gpappas on 2008-01-30 13:52:18 as
	Human cis natural antisense transcripts initiated by transposable elements. [My Copy] Trends Genet (11 January 2008) by Andrew B B. Conley, Wolfgang J J. Miller, I King K. Jordan posted to cnpq_transposon by gpappas on 2008-01-30 13:37:20 as along with 6 people and 2 groups balicea dchughes sebastien_vigneau timflutre cisevol yoanjacquemin cis-regulatory-evolution BergmanLab
	Which transposable elements are active in the human genome? [My Copy] Trends Genet, Vol. 23, No. 4. (April 2007), pp. 183-191. by R. E. Mills, E. A. Bennett, R. C. Iskow, S. E. Devine posted to cnpq_transposon by gpappas on 2008-01-30 13:36:11 as along with 4 people and 1 group bpb N0131826 cisevol yoanjacquemin BergmanLab
	Ancient Exaptation of a CORE-SINE Retroposon into a Highly Conserved Mammalian Neuronal Enhancer of the Proopiomelanocortin Gene. [My Copy] PLoS Genet, Vol. 3, No. 10. (5 October 2007) by Andrea M M. Santangelo, Flávio S J S. de Souza, Lucía F F. Franchini, Viviana F F. Bumaschny, Malcolm J J. Low, Marcelo Rubinstein posted to cnpq_transposon by gpappas on 2008-01-30 13:35:24 as along with 3 people and 2 groups timflutre cisevol dchughes cis-regulatory-evolution BergmanLab
	Discovering and detecting transposable elements in genome sequences. [My Copy] Briefings in bioinformatics, Vol. 8, No. 6. (10 November 2007), pp. 382-392. by Casey M. Bergman, Hadi Quesneville posted to cnpq_transposon by gpappas on 2008-01-30 13:34:13 as along with 14 people and 2 groups operon orzenil gwallau natstreet druvus dpollard timflutre GustavoLacerda cabbagezs maximilianh cisevol urgi yoanjacquemin pradiptaray EisenLab BergmanLab

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cnpq_transposon	14
georgios	13
transposons	5
review	5
java	4
est	4
sage	3
helitrons	3
mite	3
dils_2008	3
protein	2
statistics	2
software	2
rga	2
expression	2
musa	2
cerrado	2
metagenomics	2
corba	2
databases	1
mirna	1
bacteria	1
ddd	1
aflatoxin	1
rrna	1
ctv	1
clustering	1
consseq	1
eucalyptus	1
prediction	1
structure	1
polybayes	1
jurandir	1
454	1
phytomonas	1
differential	1
bac	1
annotation	1
arachis	1
secondary	1
gcp	1
ltr	1
citrus_sudden_death	1
comparative_genomics	1
sorghum	1
snp	1

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