grahamc's data_integration [26 articles] Export

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	DASMIweb: online integration, analysis and assessment of distributed protein interaction data [My Copy] Nucl. Acids Res., Vol. 37, No. suppl_2. (1 July 2009), pp. W122-128. by Hagen Blankenburg, Fidel Ramirez, Joachim Buch, Mario Albrecht posted to data_integration database interactions protein-protein tools by grahamc on 2009-06-16 19:50:25 as along with 3 people yaredo anf guhjy
	PPISearch: a web server for searching homologous protein-protein interactions across multiple species. [My Copy] Nucleic acids research, Vol. 37, No. Web Server issue. (1 July 2009), pp. W369-375. by C. C. Chen, C. Y. Lin, Y. S. Lo, J. M. Yang posted to bioinformatics data_integration interactions protein-protein tools by grahamc on 2009-05-14 03:34:27 as along with 3 people and 1 group yaredo daforerog guhjy ParkinsonLab_at_MaRS
	DASMI: exchanging, annotating and assessing molecular interaction data [My Copy] Bioinformatics, Vol. 25, No. 10. (15 May 2009), pp. 1321-1328. by Hagen Blankenburg, Robert D. Finn, Andreas Prlic, et al.Andrew M. Jenkinson, Fidel Ramirez, Dorothea Emig, Sven-Eric Schelhorn, Joachim Buch, Thomas Lengauer, Mario Albrecht posted to bioinformatics data_integration database interactions tools by grahamc on 2009-05-14 02:47:14 as along with 3 people kshameer guhjy beapen
	Exploring the human genome with functional maps. [My Copy] Genome research, Vol. 19, No. 6. (1 June 2009), pp. 1093-1106. by Curtis Huttenhower, Erin M. Haley, Matthew A. Hibbs, et al.Vanessa Dumeaux, Daniel R. Barrett, Hilary A. Coller, Olga G. Troyanskaya posted to data_integration disease function functional_maps human by grahamc on 2009-03-01 17:38:54 as along with 9 people jfr ptrobajo daforerog fenghezi shikin idoerg guhjy pinney pkonings
	BioMart--biological queries made easy. [My Copy] BMC genomics, Vol. 10, No. 1. (2009), 22. by Damian Smedley, Syed Haider, Benoit Ballester, et al.Richard Holland, Darin London, Gudmundur Thorisson, Arek Kasprzyk posted to bioinformatics data_integration database tools by grahamc on 2009-02-16 19:23:16 as along with 29 people and 4 groups aaltenburger artaban421 sjcockell lmichan jdbowes fgibson pekrau gangcai daforerog jfr fisherp allysonlister Stew dswan Zephyrus renatomilani guhjy natstreet pablocarb Cortel dbk mitko brianb ajaymalik neils kshameer dullhunk druvus cisevol Bioinformatics - CRUK Bioinformatics Roswell Cancer Crosstalk BergmanLab
	A genomewide functional network for the laboratory mouse. [My Copy] PLoS computational biology, Vol. 4, No. 9. (2008), e1000165. by Y. Guan, C. L. Myers, R. Lu, I. R. Lemischka, C. J. Bult, O. G. Troyanskaya posted to data_integration function_prediction interactions mouse network_biology proteomics by grahamc on 2008-10-06 21:54:23 as along with 9 people roys dansullivanblk biomcgary cswinburne zwang pengchy ptrobajo guhjy tmmurali
	GlycomeDB - integration of open-access carbohydrate structure databases [My Copy] BMC Bioinformatics, Vol. 9, No. 1. (2008) by Rene Ranzinger, Stephan Herget, Thomas Wetter, Claus W. von der Lieth posted to carbohydrate data_integration database structure by grahamc on 2008-10-06 20:30:15 as along with 3 people guhjy neils GeeSharpMinor
	iRefIndex: A consolidated protein interaction database with provenance [My Copy] BMC Bioinformatics, Vol. 9, No. 1. (2008) by Sabry Razick, George Magklaras, Ian Donaldson posted to data_integration interactions protein-protein by grahamc on 2008-10-06 20:24:56 as along with 3 people guhjy barriot neils
	BNFinder: exact and efficient method for learning Bayesian networks. [My Copy] Bioinformatics (Oxford, England), Vol. 25, No. 2. (15 January 2009), pp. 286-287. by Bartek Wilczyński, Norbert Dojer posted to bioinformatics data_integration tools by grahamc on 2008-10-06 17:23:38 as along with 5 people TRHvidsten guhjy phoenixzxl rdiaz renatomilani
	Flexible web-based integration of distributed large-scale human protein interaction maps [My Copy] Journal of Integrative Bioinformatics, Vol. 4, No. 1. (2007), pp. 51-61. by Gautam Chaurasia, Yasir Iqbal, Christian Hänig, Hanspeter Herzel, Erich E. Wanker, Matthias E. Futschik posted to bioinformatics database data_integration human interactions protein-protein tools by grahamc on 2008-04-23 17:13:15 as
	UniHI: an entry gate to the human protein interactome. [My Copy] Nucleic Acids Res, Vol. 35, No. Database issue. (January 2007) by G. Chaurasia, Y. Iqbal, C. Hänig, H. Herzel, E. E. Wanker, M. E. Futschik posted to bioinformatics biological_networks data_integration human interactions protein-protein tools by grahamc on 2008-04-23 17:04:53 as along with 3 people guhjy jfr massivemayhem
	Consolidating the set of known human protein-protein interactions in preparation for large-scale mapping of the human interactome [My Copy] Genome Biology, Vol. 6, No. 5. (2005), R40. by Arun Ramani, Razvan Bunescu, Raymond Mooney, Edward Marcotte posted to data_integration human interactions protein-protein by grahamc on 2008-04-16 18:59:40 as along with 19 people and 5 groups fesousa ggallone yaredo setar tmmurali dragonrez okarsligil lfriedl ccots balajis maryee brant opheliav davidandrzej wnpx rlhsiao bundschu mikaelhuss raiyar Complex Networks Jarman Lab kdl Bioinformatics generif_paper
	Computational analysis of human protein interaction networks. [My Copy] Proteomics, Vol. 7, No. 15. (August 2007), pp. 2541-2552. by F. Ramírez, A. Schlicker, Y. Assenov, T. Lengauer, M. Albrecht posted to data_integration human interactions network_biology protein-protein by grahamc on 2008-03-28 20:45:02 as along with 7 people viji_c aelef cerca guhjy balicea paolomarcatili carlk
	Context-sensitive data integration and prediction of biological networks [My Copy] Bioinformatics, Vol. 23, No. 17. (1 September 2007), pp. 2322-2330. by Chad L. Myers, Olga G. Troyanskaya posted to data_integration network_biology by grahamc on 2008-03-28 20:37:21 as along with 7 people tmmurali rdiaz iris_2001 nedwards shung carlk guhjy
	PROTEOMICS: Enhanced: Integrating Interactomes [My Copy] Science, Vol. 295, No. 5553. (11 January 2002), pp. 284-287. by Mark Gerstein, Ning Lan, Ronald Jansen posted to data_integration interactions by grahamc on 2008-03-28 20:25:16 as along with 4 people and 1 group ronkeliz tomhebbron lfriedl balajis kdl
	Integrating 'omic' information: a bridge between genomics and systems biology. [My Copy] Trends Genet, Vol. 19, No. 10. (October 2003), pp. 551-560. by H. Ge, A. J. Walhout, M. Vidal posted to data_integration genomics network_biology by grahamc on 2008-03-28 20:23:38 as along with 7 people and 2 groups thegoose2 tharris lfriedl wnpx biosv reidy sanchezbuelna C. elegans / WormBase kdl
	Integrating interactome, phenome, and transcriptome mapping data for the C. elegans germline. [My Copy] Current biology : CB, Vol. 12, No. 22. (19 November 2002), pp. 1952-1958. by Albertha J. Walhout, Jérôme Reboul, Olena Shtanko, et al.Nicolas Bertin, Philippe Vaglio, Hui Ge, Hongmei Lee, Lynn Doucette-Stamm, Kristin C. Gunsalus, Aaron J. Schetter, Diane G. Morton, Kenneth J. Kemphues, Valerie Reinke, Stuart K. Kim, Fabio Piano, Marc Vidal posted to data_integration interactions network_biology by grahamc on 2008-03-28 20:21:59 as along with 3 people and 1 group nzm thegoose2 tharris C. elegans / WormBase
	Interrelating different types of genomic data, from proteome to secretome: 'oming in on function. [My Copy] Genome Res., Vol. 11, No. 9. (September 2001), pp. 1463-1468. by D. Greenbaum, N. M. Luscombe, R. Jansen, J. Qian, M. Gerstein posted to data_integration interactions network_biology protein-protein by grahamc on 2008-03-28 20:18:17 as
	Relating Three-Dimensional Structures to Protein Networks Provides Evolutionary Insights [My Copy] Science, Vol. 314, No. 5807. (22 December 2006), pp. 1938-1941. by Philip M. Kim, Long J. Lu, Yu Xia, Mark B. Gerstein posted to data_integration evolution interactions protein-protein by grahamc on 2008-03-28 20:04:42 as along with 23 people and 2 groups ucbcjbm pablocarb mgomes rsaito MatthiasReimann cerca bicko lfriedl chad_davis Einat tny choonpeng timflutre ramensky massivemayhem efge lpfernandes cdeane Pao-Yang phoenixzxl carlk paolomarcatili saket structural_bioinformatics kdl
	Relating whole-genome expression data with protein-protein interactions. [My Copy] Genome Res, Vol. 12, No. 1. (January 2002), pp. 37-46. by R. Jansen, D. Greenbaum, M. Gerstein posted to data_integration expression interactions protein-protein by grahamc on 2008-03-28 20:03:18 as along with 10 people saket Robinder gurkanbebek gespim cjeans iris_2001 kintoki paolomarcatili nedwards carlk
	Correlation between transcriptome and interactome mapping data from Saccharomyces cerevisiae. [My Copy] Nature genetics, Vol. 29, No. 4. (December 2001), pp. 482-486. by H. Ge, Z. Liu, G. M. Church, M. Vidal posted to data_integration interactions model_organisms network_biology translation yeast by grahamc on 2008-03-28 19:59:46 as along with 13 people and 1 group jeremymiller lptolik Robinder BioGeek lfriedl wnpx mmt gespim bluto ruvido kintoki roys paolomarcatili kdl
	Integrating physical and genetic maps: from genomes to interaction networks [My Copy] Nature Reviews Genetics, Vol. 8, No. 9. (01 September 2007), pp. 699-710. by Andreas Beyer, Sourav Bandyopadhyay, Trey Ideker posted to data_integration network_biology by grahamc on 2008-03-28 17:09:51 as along with 20 people and 4 groups Jporci dakelley chasmand mtaschuk Zephyrus druvus yyby misonneh giovenko bpcusack guhjy balicea dchughes sebastien_vigneau joepickrell zwang shikin lh1 cdeane carlk Roswell Cancer Crosstalk Bioinformatics G4ID Genetics-of-Gambling
	Current progress in network research: toward reference networks for key model organisms [My Copy] Brief Bioinform, Vol. 8, No. 5. (1 September 2007), pp. 318-332. by Balaji S. Srinivasan, Nigam H. Shah, Jason A. Flannick, Eduardo Abeliuk, Antal F. Novak, Serafim Batzoglou posted to data_integration interactions model_organisms protein-protein by grahamc on 2008-03-28 17:03:57 as along with 10 people and 1 group carlk abhishek_tiwari akshayk ptrobajo pengchy guhjy nedwards roys daed marck Bioinformatics
	Fuzzy association rules for biological data analysis: a case study on yeast [My Copy] BMC Bioinformatics, Vol. 9, No. 1. (2008) by Francisco Lopez, Armando Blanco, Fernando Garcia, Carlos Cano, Antonio Marin posted to data_integration fuzzy_logic statistics by grahamc on 2008-03-28 16:51:21 as along with 5 people and 1 group laughcry barriot xili03 yoanjacquemin guhjy Bioinformatics
	An efficient strategy for extensive integration of diverse biological data for protein function prediction. [My Copy] Bioinformatics (28 November 2007) by Hon Nian N. Chua, Wing-Kin K. Sung, Limsoon Wong posted to data_integration methods scoring tools by grahamc on 2008-01-04 03:56:42 as along with 4 people tmmurali bootsy carlk guhjy
	Assessing the limits of genomic data integration for predicting protein networks [My Copy] Genome Research, Vol. 15, No. 7. (July 2005), pp. 945-953. by Long J. Lu, Yu Xia, Alberto Paccanaro, Haiyuan Yu, Mark Gerstein posted to data_integration function_prediction statistics by grahamc on 2007-10-10 20:08:49 as along with 17 people and 3 groups ashishanand paccanarolab jaimie aelef okarsligil lfriedl balajis maryee opheliav wnpx mbeautru eukfn nedwards brianb iris_2001 carlk phoenixzxl Paccanaro Lab kdl Bioinformatics

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interactions	169
protein-protein	143
methods	78
synthetic_biology	72
tools	67
evolution	64
ecm	56
network_biology	53
prediction	46
network_topology	33
human	32
bioinformatics	29
data_integration	26
domains	25
network_properties	25
disease	21
genomics	21
elastin	20
igem	20
database	19
subcellular_location	19
proteomics	18
metabolism	17
motifs	17
comparative_genomics	16
systems_biology	16
algorithm	15
elastomer	15
function_prediction	15
statistics	15
network_statistics	14
sequencing	14
domain	13
gene_ontology	13
review	13
yeast	13
model_organisms	10
self-assembly	10
collagen	9
modeling	9
network_confidence	9
clustering_methods	8
tissue_specific_gene_expression	8
algorithms	7
cytoscape	7
matrix_architecture	7
network_alignment	7
protein_evolution	7
annotation	6
clustering	6
pattern_recognition	6
phenotype	6
protein_complexes	6
transmembrane_prediction	6
bio_fuel	5
functional_modules	5
interaction	5
network_comparison	5
post_translational_modification	5
alignment	4
biological_networks	4
ecm_remodeling	4
ecoli	4
expression	4
gene_expression	4
genomes	4
go_terms	4
graph_theory	4
matrix_remodeling	4
metabolic_channeling	4
minimal_cell	4
protein_protein_interactions	4
signaling	4
signal_peptide	4
two-hybrid	4
visualization	4
wound_repair	4
angiogenesis	3
betweenness	3
biology	3
bone_homeostasis	3
choanoflagellates	3
co-expression	3
development	3
function	3
functional_annotation	3
gene_identifiers	3
genome_evolution	3
mass_spec	3
microarray	3
network_visualization	3
orthologues	3
pathway_modeling	3
phylogenetic_analysis	3
protein	3
scientific_communication	3
simulation	3
structure	3
vertebrate_genomics	3
accuracy	2
aging	2
assembly	2
binding_domains	2
cancer	2
cardiac	2
centrality	2
co-localization	2
epigenetics	2
evaluation	2
fibroblast	2
hydra	2
integrin	2
interologues	2
long_pcr	2
matrix_mmp	2
metazoa	2
morphology	2
pattern_development	2
publishing	2
scoring	2
search	2
secretome	2
selection	2
sequence_conservation	2
sequenced_organisms	2
software	2
specialty-network	2
sponges	2
standards	2
synteny	2
text_mining	2
transcription_factors	2
translation	2
aging_network	1
alternative_splicing	1
ancestral_genomes	1
ancient_dna	1
aorta	1
api	1
assessment	1
bacteria	1
biofuels	1
biological_computation	1
bladder	1
bone_mineralization	1
bone_regulatory_network	1
capillary_formation	1
carbohydrate	1
career_science	1
cell_migration	1
cell_wall	1
cloning	1
cnidaria	1
curation	1
cysteine-labeling	1
cytoskeleton	1
decorin	1
diatoms	1
disease_classification	1
domain-domain	1
early_life	1
e_coli	1
encode_project	1
engineered_proteins	1
enrichment	1
ethics	1
exobiology	1
extracellular	1
extracellular_proteins	1
fibrillin	1
fibrin	1
fibulin	1
functional_maps	1
fuzzy_logic	1
gene	1
gene_environment	1
gene_families	1
gene_loss	1
genome_annotation	1
glycomics	1
gold_standards	1
hemostasis	1
hexapoda	1
homologue_detection	1
hydrophobic_polymerization	1
imaging	1
induction	1
interaction_site	1
introns	1
java	1
kidney_development	1
learning	1
lumier	1
machine_learning	1
mammalian	1
mars	1
memory	1
mesh_terms	1
metadata	1
micro_rna	1
microscopy	1
modularity	1
molecular_dynamics	1
mouse	1
mouse_development	1
multicellularity	1
net	1
network_analysis	1
neuroplasticity	1
normal_vs_disease	1
ontologies	1
organogenesis	1
orthologous	1
phage_display	1
plasmodium	1
poster	1
protein_dynamics	1
protein_features	1
protein_folding	1
protein_function	1
protein_interactions	1
protein_scaffolds	1
quality	1
reliability	1
scale-free	1
secondary_structure	1
silkworm	1
systems	1
tension	1
tissue	1
uniprot	1
validation	1
vasculogenesis	1
visualization_system	1
zebrafish	1

grahamc's data_integration [26 articles] Export

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