grahamc's genomics [21 articles] Export

Recent papers added to grahamc's library classified by the tag genomics. You can also see everyone's genomics.

	Co-evolutionary networks of genes and cellular processes across fungal species [My Copy] Genome Biology, Vol. 10, No. 5. (2009), R48. by Tamir Tuller, Martin Kupiec, Eytan Ruppin posted to evolution genome_evolution genomics yeast by grahamc on 2009-05-14 03:13:51 as along with 5 people kiekyon roys inesdesantiago dokky michaelbarton
	Proteomics studies confirm the presence of alternative protein isoforms on a large scale [My Copy] Genome Biology, Vol. 9 (18 November 2008), R162. by Michael, Alfonso Valencia posted to genomics proteomics by grahamc on 2008-12-02 03:00:42 as along with 4 people brianb bpcusack renatomilani reyez
	Exon creation and establishment in human genes [My Copy] Genome Biology, Vol. 9 (23 September 2008), R141. by Andre Corvelo, Eduardo Eyras posted to bioinformatics evolution genomics human protein_evolution by grahamc on 2008-10-06 20:51:06 as along with 2 people balicea dakelley
	Genomics of cellulosic biofuels [My Copy] Nature, Vol. 454, No. 7206. (2008), pp. 841-845. by Edward M. Rubin posted to biofuels genomics by grahamc on 2008-09-04 01:12:53 as along with 1 person zwang
	The Trichoplax genome and the nature of placozoans [My Copy] Nature, Vol. 454, No. 7207., pp. 955-960. by Mansi Srivastava, Emina Begovic, Jarrod Chapman, et al.Nicholas H. Putnam, Uffe Hellsten, Takeshi Kawashima, Alan Kuo, Therese Mitros, Asaf Salamov, Meredith L. Carpenter, Ana Y. Signorovitch, Maria A. Moreno, Kai Kamm, Jane Grimwood, Jeremy Schmutz, Harris Shapiro, Igor V. Grigoriev, Leo W. Buss, Bernd Schierwater, Stephen L. Dellaporta, Daniel S. Rokhsar posted to comparative_genomics evolution genomes genomics by grahamc on 2008-09-04 00:59:16 as along with 1 person cmzmasek
	A probabilistic view of gene function. [My Copy] Nat Genet, Vol. 36, No. 6. (June 2004), pp. 559-564. by A. G. Fraser, E. M. Marcotte posted to function_prediction genomics by grahamc on 2008-03-28 20:50:08 as along with 10 people and 1 group bertelsen snuppepuppan ziquje lfriedl opheliav wnpx samal massivemayhem bootsy vietanh0 kdl
	Discovery of biological networks from diverse functional genomic data. [My Copy] Genome Biol, Vol. 6, No. 13. (2005) by C. L. Myers, D. Robson, A. Wible, et al.M. A. Hibbs, C. Chiriac, C. L. Theesfeld, K. Dolinski, O. G. Troyanskaya posted to function_prediction genomics network_biology by grahamc on 2008-03-28 20:41:42 as along with 5 people roys dragonrez cswinburne carlk AbnerCYH
	Finding function: evaluation methods for functional genomic data [My Copy] BMC Genomics, Vol. 7 (25 July 2006), 187. by Chad L. Myers, Daniel R. Barrett, Matthew A. Hibbs, Curtis Huttenhower, Olga G. Troyanskaya posted to function_prediction genomics network_biology network_confidence statistics by grahamc on 2008-03-28 20:39:02 as along with 8 people and 2 groups saket tjimenez jfr smbaxtersf dejori carlk marck cerca ic4 generif_paper
	Genomic analysis of essentiality within protein networks. [My Copy] Trends Genet, Vol. 20, No. 6. (June 2004), pp. 227-231. by H. Yu, D. Greenbaum, H. Xin Lu, X. Zhu, M. Gerstein posted to genomics interactions network_biology protein-protein by grahamc on 2008-03-28 20:28:34 as along with 5 people and 1 group apaydin niolis nickluscombe shikin dylanwalker EBI-regulation
	Analyzing protein function on a genomic scale: the importance of gold-standard positives and negatives for network prediction [My Copy] Current Opinion in Microbiology, Vol. 7, No. 5. (October 2004), pp. 535-545. by R. Jansen, M. Gerstein posted to function_prediction genomics network_biology network_confidence standards by grahamc on 2008-03-28 20:26:40 as along with 6 people and 2 groups flbarroso okarsligil lfriedl wnpx neils carlk kdl Bioinformatics
	Integrating 'omic' information: a bridge between genomics and systems biology. [My Copy] Trends Genet, Vol. 19, No. 10. (October 2003), pp. 551-560. by H. Ge, A. J. Walhout, M. Vidal posted to data_integration genomics network_biology by grahamc on 2008-03-28 20:23:38 as along with 7 people and 2 groups thegoose2 tharris lfriedl wnpx biosv reidy sanchezbuelna C. elegans / WormBase kdl
	What is a gene, post-ENCODE? History and updated definition [My Copy] Genome Research, Vol. 17, No. 6. (June 2007), pp. 669-681. by Mark B. Gerstein, Can Bruce, Joel S. Rozowsky, et al.Deyou Zheng, Jiang Du, Jan O. Korbel, Olof Emanuelsson, Zhengdong D. Zhang, Sherman Weissman, Michael Snyder posted to encode_project evolution genomics by grahamc on 2008-03-28 17:38:16 as along with 35 people and 4 groups daveGerrard Yanno inesdesantiago kentz ddcttrl bertelsen tmarscha thegoose2 burak guhjy carolh12 eweaver dpollard balicea dchughes dullhunk madhadron cottrell egonw ghattem sujaikumar Garamonfok PunkRock jasonbobe PredictER cabbagezs Jporci kmdaily krokicki antonkratz Minty hpaces tharris altotor mjoach Bioinformatics EisenLab G4ID Genetics-of-Gambling
	Genetics of global gene expression [My Copy] Nature Reviews Genetics, Vol. 7, No. 11., pp. 862-872. by Matthew V. Rockman, Leonid Kruglyak posted to genomics review by grahamc on 2008-03-28 17:18:28 as along with 17 people and 10 groups roys dpollard tardigrade balicea dchughes nickluscombe neveaire aswin qfwills ealloza giovanni mlovell lp2 emarker natstreet mimulus_99 guhjy Biostatistics Computational-Genomics Bioinformatics EisenLab Neuroscience G4ID EBI-regulation BioinfoCIPF GeschwindLab Genetics-of-Gambling
	Statistical significance for genomewide studies [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 100, No. 16. (5 August 2003), pp. 9440-9445. by John D. Storey, Robert Tibshirani posted to comparative_genomics genomics statistics by grahamc on 2008-03-28 16:47:02 as along with 34 people and 2 groups jperkins arider1 ilyashl icecrown bertelsen jbhiatt aviad_work biomcgary daforerog treangen druvus vertikalist maximilianh diging_data egreenfest guhjy textoris RMGraze jen_drake hggr frohike schuylrp incovoma kynn sancho 7ofAnn nicholso shikin wirawan BrianTomasik roys sconlan zhouyu bpcusack BTS-PT-AS-CS Bioinformatics
	Genomic fossils as a snapshot of the human transcriptome [My Copy] PNAS, Vol. 103, No. 5. (31 January 2006), pp. 1364-1369. by Ronen Shemesh, Amit Novik, Sarit Edelheit, Rotem Sorek posted to evolution genomics by grahamc on 2008-03-27 16:59:09 as along with 2 people and 2 groups dchughes tabu G4ID Genetics-of-Gambling
	Gene number expansion and contraction in vertebrate genomes with respect to invertebrate genomes. [My Copy] Genome Res (14 December 2007) by Anuphap Prachumwat, Wen-Hsiung H. Li posted to comparative_genomics evolution gene_families genomics vertebrate_genomics by grahamc on 2008-01-05 03:12:13 as
	Raising the estimate of functional human sequences. [My Copy] Genome Res (9 August 2007) by Michael Pheasant, John S S. Mattick posted to evolution genomics by grahamc on 2007-09-08 03:17:26 as along with 11 people and 1 group galka8_diploma hdopazo guhjy jfr andersbj djkt lp2 cabbagezs nklee ljs mimulus_99 microRNA
	ENCODE and our very busy genome [My Copy] Nature Genetics, Vol. 39, No. 7., pp. 817-818. by Steven Henikoff posted to genomics by grahamc on 2007-07-25 20:34:25 as along with 2 people and 2 groups blobbybirdman yezq Bioinformatics UH - Computational Biology
	Sea Anemone Genome Reveals Ancestral Eumetazoan Gene Repertoire and Genomic Organization [My Copy] Science, Vol. 317, No. 5834. (6 July 2007), pp. 86-94. by Nicholas H. Putnam, Mansi Srivastava, Uffe Hellsten, et al.Bill Dirks, Jarrod Chapman, Asaf Salamov, Astrid Terry, Harris Shapiro, Erika Lindquist, Vladimir V. Kapitonov, Jerzy Jurka, Grigory Genikhovich, Igor V. Grigoriev, Susan M. Lucas, Robert E. Steele, John R. Finnerty, Ulrich Technau, Mark Q. Martindale, Daniel S. Rokhsar posted to cnidaria evolution genomics sequenced_organisms by grahamc on 2007-07-11 21:30:20 as along with 5 people cmzmasek taroleo madhadron xxxxxxxxxxx nhp
	The genetic code is nearly optimal for allowing additional information within protein-coding sequences. [My Copy] Genome Res (9 February 2007) by Shalev Itzkovitz, Uri Alon posted to evolution genomics by grahamc on 2007-02-26 18:08:30 as along with 10 people and 2 groups kirasato gpalidwor madhadron msierk raiyar raylim Minty gwenknight bpcusack ptrobajo Bioinformatics steinmetzlab
	An annotated cDNA library and microarray for large-scale gene-expression studies in the ant Solenopsis invicta [My Copy] Genome Biology, Vol. 8 (15 January 2007), R9. by John Wang, Stephanie Jemielity, Paolo Uva, Yannick Wurm, Johannes Graff, Laurent Keller posted to hexapoda genomics by grahamc on 2007-01-23 00:00:58 as

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interactions	169
protein-protein	143
methods	78
synthetic_biology	72
tools	67
evolution	64
ecm	56
network_biology	53
prediction	46
network_topology	33
human	32
bioinformatics	29
data_integration	26
network_properties	25
domains	25
disease	21
genomics	21
igem	20
elastin	20
subcellular_location	19
database	19
proteomics	18
metabolism	17
motifs	17
comparative_genomics	16
systems_biology	16
function_prediction	15
elastomer	15
algorithm	15
statistics	15
sequencing	14
network_statistics	14
review	13
gene_ontology	13
domain	13
yeast	13
model_organisms	10
self-assembly	10
collagen	9
network_confidence	9
modeling	9
tissue_specific_gene_expression	8
clustering_methods	8
matrix_architecture	7
network_alignment	7
protein_evolution	7
algorithms	7
cytoscape	7
transmembrane_prediction	6
pattern_recognition	6
protein_complexes	6
clustering	6
phenotype	6
annotation	6
post_translational_modification	5
network_comparison	5
functional_modules	5
bio_fuel	5
interaction	5
ecoli	4
wound_repair	4
matrix_remodeling	4
minimal_cell	4
go_terms	4
protein_protein_interactions	4
visualization	4
expression	4
ecm_remodeling	4
gene_expression	4
alignment	4
signaling	4
metabolic_channeling	4
genomes	4
signal_peptide	4
two-hybrid	4
biological_networks	4
graph_theory	4
development	3
betweenness	3
network_visualization	3
vertebrate_genomics	3
microarray	3
biology	3
orthologues	3
function	3
scientific_communication	3
genome_evolution	3
phylogenetic_analysis	3
pathway_modeling	3
co-expression	3
gene_identifiers	3
simulation	3
functional_annotation	3
bone_homeostasis	3
structure	3
protein	3
choanoflagellates	3
angiogenesis	3
mass_spec	3
publishing	2
evaluation	2
integrin	2
hydra	2
cancer	2
cardiac	2
text_mining	2
co-localization	2
binding_domains	2
metazoa	2
interologues	2
sequence_conservation	2
synteny	2
sequenced_organisms	2
translation	2
search	2
assembly	2
sponges	2
long_pcr	2
secretome	2
selection	2
morphology	2
fibroblast	2
accuracy	2
epigenetics	2
specialty-network	2
matrix_mmp	2
aging	2
transcription_factors	2
standards	2
scoring	2
centrality	2
software	2
pattern_development	2
bladder	1
disease_classification	1
modularity	1
functional_maps	1
ontologies	1
introns	1
hydrophobic_polymerization	1
gene_families	1
normal_vs_disease	1
cysteine-labeling	1
reliability	1
engineered_proteins	1
hemostasis	1
gene	1
aging_network	1
cell_migration	1
protein_function	1
fibulin	1
early_life	1
fuzzy_logic	1
mammalian	1
organogenesis	1
tissue	1
decorin	1
lumier	1
bone_regulatory_network	1
protein_features	1
vasculogenesis	1
induction	1
assessment	1
ancient_dna	1
domain-domain	1
network_analysis	1
learning	1
protein_dynamics	1
orthologous	1
extracellular	1
mars	1
quality	1
fibrin	1
kidney_development	1
cloning	1
visualization_system	1
multicellularity	1
gene_environment	1
ethics	1
mouse_development	1
plasmodium	1
silkworm	1
cell_wall	1
career_science	1
microscopy	1
machine_learning	1
hexapoda	1
extracellular_proteins	1
zebrafish	1
exobiology	1
bone_mineralization	1
java	1
mouse	1
tension	1
cytoskeleton	1
poster	1
protein_scaffolds	1
systems	1
encode_project	1
neuroplasticity	1
bacteria	1
net	1
uniprot	1
cnidaria	1
e_coli	1
protein_interactions	1
memory	1
phage_display	1
genome_annotation	1
aorta	1
glycomics	1
interaction_site	1
metadata	1
imaging	1
capillary_formation	1
scale-free	1
ancestral_genomes	1
protein_folding	1
gene_loss	1
curation	1
biological_computation	1
secondary_structure	1
molecular_dynamics	1
gold_standards	1
diatoms	1
validation	1
api	1
micro_rna	1
mesh_terms	1
homologue_detection	1
enrichment	1
biofuels	1
carbohydrate	1
alternative_splicing	1
fibrillin	1

grahamc's genomics [21 articles] Export

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