grahamc's statistics [15 articles] Export

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	GOrilla: a tool for discovery and visualization of enriched GO terms in ranked gene lists [My Copy] BMC Bioinformatics, Vol. 10 (03 February 2009), 48. by Eran, Zohar Yakhini posted to bioinformatics enrichment gene_ontology statistics tools by grahamc on 2009-02-09 17:46:38 as along with 8 people and 1 group Effie guhjy RamuAnandakrishnan kshameer renatomilani cmzmasek paszkows jmeppley NaCTeM
	Comparative assessment of large-scale data sets of protein-protein interactions. [My Copy] Nature, Vol. 417, No. 6887. (23 May 2002), pp. 399-403. by Christian von Mering, Roland Krause, Berend Snel, et al.Michael Cornell, Stephen G. Oliver, Stanley Fields, Peer Bork posted to interactions network_confidence protein-protein statistics by grahamc on 2008-03-28 20:49:11 as along with 24 people and 6 groups nzm lawraga semin camster barry dragonrez bicko lfriedl chad_davis alexg j3xucite bundschu yeastyboy ruvido raiyar iris_2001 cmor shu Evangelia shikin Pao-Yang carlk cerca ethkim dbk-lab structural_bioinformatics kdl Bioinformatics generif_paper GeneGo
	Hierarchical multi-label prediction of gene function. [My Copy] Bioinformatics (12 January 2006) by Zafer Barutcuoglu, Robert E E. Schapire, Olga G G. Troyanskaya posted to function_prediction statistics by grahamc on 2008-03-28 20:39:59 as along with 3 people and 1 group tsoumakas uknandal carlk Multilabel Classification
	Finding function: evaluation methods for functional genomic data [My Copy] BMC Genomics, Vol. 7 (25 July 2006), 187. by Chad L. Myers, Daniel R. Barrett, Matthew A. Hibbs, Curtis Huttenhower, Olga G. Troyanskaya posted to function_prediction genomics network_biology network_confidence statistics by grahamc on 2008-03-28 20:39:02 as along with 8 people and 2 groups saket tjimenez jfr smbaxtersf dejori carlk marck cerca ic4 generif_paper
	GOing from functional genomics to biological significance. [My Copy] Cytogenet Genome Res, Vol. 117, No. 1-4. (2007), pp. 278-287. by F. M. McCarthy, S. M. Bridges, S. C. Burgess posted to annotation comparative_genomics gene_ontology model_organisms statistics by grahamc on 2008-03-28 17:16:55 as along with 1 person and 1 group sgoetz Bioinformatics
	Fuzzy association rules for biological data analysis: a case study on yeast [My Copy] BMC Bioinformatics, Vol. 9, No. 1. (2008) by Francisco Lopez, Armando Blanco, Fernando Garcia, Carlos Cano, Antonio Marin posted to data_integration fuzzy_logic statistics by grahamc on 2008-03-28 16:51:21 as along with 5 people and 1 group laughcry barriot xili03 yoanjacquemin guhjy Bioinformatics
	Controlling the False Discovery Rate: A Practical and Powerful Approach to Multiple Testing [My Copy] Journal of the Royal Statistical Society. Series B (Methodological), Vol. 57, No. 1. (1995), pp. 289-300. by Yoav Benjamini, Yosef Hochberg posted to statistics by grahamc on 2008-03-28 16:48:44 as along with 38 people and 4 groups ctacmo abrentnall jperkins CulCog jlorent zufar bertelsen Zephyrus fisherp michaelbarton dakelley lwaldron polivares brianb ucbcjbm jfr xingxu emptyhb renewang Yanno sdvillal druvus natstreet czeller guhjy RMGraze oannes vplagnol frohike shigepong ccr axelon ugengma amsantos rschulz dragonrez isimpson vertikalist Biostatistics Bioinformatics Regulomics_UCHSC BTS-PT-AS-CS
	Statistical significance for genomewide studies [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 100, No. 16. (5 August 2003), pp. 9440-9445. by John D. Storey, Robert Tibshirani posted to comparative_genomics genomics statistics by grahamc on 2008-03-28 16:47:02 as along with 34 people and 2 groups jperkins arider1 ilyashl icecrown bertelsen jbhiatt aviad_work biomcgary daforerog treangen druvus vertikalist maximilianh diging_data egreenfest guhjy textoris RMGraze jen_drake hggr frohike schuylrp incovoma kynn sancho 7ofAnn nicholso shikin wirawan BrianTomasik roys sconlan zhouyu bpcusack BTS-PT-AS-CS Bioinformatics
	Improved detection of overrepresentation of Gene-Ontology annotations with parent child analysis [My Copy] Bioinformatics, Vol. 23, No. 22. (15 November 2007), pp. 3024-3031. by Steffen Grossmann, Sebastian Bauer, Peter N. Robinson, Martin Vingron posted to gene_ontology methods statistics tools by grahamc on 2007-12-14 04:07:19 as along with 8 people poirel cmzmasek dandaman tmmurali sgoetz heliopais RamuAnandakrishnan marck
	Coverage and error models of protein-protein interaction data by directed graph analysis [My Copy] Genome Biology, Vol. 8 (10 September 2007), R186. by Tony Chiang, Denise Scholtens, Deepayan Sarkar, Robert Gentleman, Wolfgang Huber posted to interactions protein-protein proteomics statistics by grahamc on 2007-10-10 21:11:32 as along with 5 people Yanno jfr chad_davis winterschlaefer Pao-Yang
	Assessing the limits of genomic data integration for predicting protein networks [My Copy] Genome Research, Vol. 15, No. 7. (July 2005), pp. 945-953. by Long J. Lu, Yu Xia, Alberto Paccanaro, Haiyuan Yu, Mark Gerstein posted to data_integration function_prediction statistics by grahamc on 2007-10-10 20:08:49 as along with 17 people and 3 groups ashishanand paccanarolab jaimie aelef okarsligil lfriedl balajis maryee opheliav wnpx mbeautru eukfn nedwards brianb iris_2001 carlk phoenixzxl Paccanaro Lab kdl Bioinformatics
	A data integration methodology for systems biology. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 102, No. 48. (29 November 2005), pp. 17296-17301. by D. Hwang, A. G. Rust, S. Ramsey, et al.J. J. Smith, D. M. Leslie, A. D. Weston, P. de Atauri, J. D. Aitchison, L. Hood, A. F. Siegel, H. Bolouri posted to clustering methods statistics tools by grahamc on 2007-10-10 20:05:45 as along with 21 people and 4 groups daforerog shikin jimineep ggallone brian tmmurali dragonrez okarsligil jfr lfriedl Schmidtc eweaver wnpx biosv Sharpshoot noano mbeautru reidy GeeSharpMinor nedwards athleem Jarman Lab kdl Bioinformatics JJJ
	Statistical tests to compare motif count exceptionalities [My Copy] BMC Bioinformatics, Vol. 8 (08 March 2007), 84. by Stephane Robin, Sophie Schbath, Vincent Vandewalle posted to motifs statistics by grahamc on 2007-03-14 20:56:01 as along with 4 people smiddha maralena aaronsmith quianominorleo
	Quantifying similarity between motifs [My Copy] Genome Biology, Vol. 8, No. 2. (26 February 2007), R24. by Shobhit Gupta, John Stamatoyannopoulos, Timothy Bailey, William Noble posted to motifs statistics tools by grahamc on 2007-03-09 21:26:16 as along with 6 people and 1 group jlike Dulce maximilianh cwbrown nklee gracio EisenLab
	Enrichment or depletion of a GO category within a class of genes: which test? [My Copy] Bioinformatics, Vol. 23, No. 4. (15 February 2007), pp. 401-407. by Isabelle Rivals, Leon Personnaz, Lieng Taing, Marie-Claude Potier posted to statistics go_terms by grahamc on 2007-01-20 19:51:24 as along with 12 people and 2 groups ipark-kaist phoenixzxl cisevol cmzmasek paszkows winterschlaefer guhjy ealloza capitall zhouyu yas maralena BergmanLab BioinfoCIPF

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interactions	169
protein-protein	143
methods	78
synthetic_biology	72
tools	67
evolution	64
ecm	56
network_biology	53
prediction	46
network_topology	33
human	32
bioinformatics	29
data_integration	26
domains	25
network_properties	25
disease	21
genomics	21
elastin	20
igem	20
database	19
subcellular_location	19
proteomics	18
metabolism	17
motifs	17
comparative_genomics	16
systems_biology	16
algorithm	15
elastomer	15
function_prediction	15
statistics	15
network_statistics	14
sequencing	14
domain	13
gene_ontology	13
review	13
yeast	13
model_organisms	10
self-assembly	10
collagen	9
modeling	9
network_confidence	9
clustering_methods	8
tissue_specific_gene_expression	8
algorithms	7
cytoscape	7
matrix_architecture	7
network_alignment	7
protein_evolution	7
annotation	6
clustering	6
pattern_recognition	6
phenotype	6
protein_complexes	6
transmembrane_prediction	6
bio_fuel	5
functional_modules	5
interaction	5
network_comparison	5
post_translational_modification	5
alignment	4
biological_networks	4
ecm_remodeling	4
ecoli	4
expression	4
gene_expression	4
genomes	4
go_terms	4
graph_theory	4
matrix_remodeling	4
metabolic_channeling	4
minimal_cell	4
protein_protein_interactions	4
signaling	4
signal_peptide	4
two-hybrid	4
visualization	4
wound_repair	4
angiogenesis	3
betweenness	3
biology	3
bone_homeostasis	3
choanoflagellates	3
co-expression	3
development	3
function	3
functional_annotation	3
gene_identifiers	3
genome_evolution	3
mass_spec	3
microarray	3
network_visualization	3
orthologues	3
pathway_modeling	3
phylogenetic_analysis	3
protein	3
scientific_communication	3
simulation	3
structure	3
vertebrate_genomics	3
accuracy	2
aging	2
assembly	2
binding_domains	2
cancer	2
cardiac	2
centrality	2
co-localization	2
epigenetics	2
evaluation	2
fibroblast	2
hydra	2
integrin	2
interologues	2
long_pcr	2
matrix_mmp	2
metazoa	2
morphology	2
pattern_development	2
publishing	2
scoring	2
search	2
secretome	2
selection	2
sequence_conservation	2
sequenced_organisms	2
software	2
specialty-network	2
sponges	2
standards	2
synteny	2
text_mining	2
transcription_factors	2
translation	2
aging_network	1
alternative_splicing	1
ancestral_genomes	1
ancient_dna	1
aorta	1
api	1
assessment	1
bacteria	1
biofuels	1
biological_computation	1
bladder	1
bone_mineralization	1
bone_regulatory_network	1
capillary_formation	1
carbohydrate	1
career_science	1
cell_migration	1
cell_wall	1
cloning	1
cnidaria	1
curation	1
cysteine-labeling	1
cytoskeleton	1
decorin	1
diatoms	1
disease_classification	1
domain-domain	1
early_life	1
e_coli	1
encode_project	1
engineered_proteins	1
enrichment	1
ethics	1
exobiology	1
extracellular	1
extracellular_proteins	1
fibrillin	1
fibrin	1
fibulin	1
functional_maps	1
fuzzy_logic	1
gene	1
gene_environment	1
gene_families	1
gene_loss	1
genome_annotation	1
glycomics	1
gold_standards	1
hemostasis	1
hexapoda	1
homologue_detection	1
hydrophobic_polymerization	1
imaging	1
induction	1
interaction_site	1
introns	1
java	1
kidney_development	1
learning	1
lumier	1
machine_learning	1
mammalian	1
mars	1
memory	1
mesh_terms	1
metadata	1
micro_rna	1
microscopy	1
modularity	1
molecular_dynamics	1
mouse	1
mouse_development	1
multicellularity	1
net	1
network_analysis	1
neuroplasticity	1
normal_vs_disease	1
ontologies	1
organogenesis	1
orthologous	1
phage_display	1
plasmodium	1
poster	1
protein_dynamics	1
protein_features	1
protein_folding	1
protein_function	1
protein_interactions	1
protein_scaffolds	1
quality	1
reliability	1
scale-free	1
secondary_structure	1
silkworm	1
systems	1
tension	1
tissue	1
uniprot	1
validation	1
vasculogenesis	1
visualization_system	1
zebrafish	1

grahamc's statistics [15 articles] Export

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