greg's microarray [44 articles] Export

Recent papers added to greg's library classified by the tag microarray. You can also see everyone's microarray.

	Molecular networks in microarray analysis. [My Copy] Journal of bioinformatics and computational biology, Vol. 5, No. 2B. (April 2007), pp. 429-456. by Andrey Y. Sivachenko, Anton Yuryev, Nikolai Daraselia, Ilya Mazo posted to pathway network microarray methods analysis by greg on 2009-10-11 01:58:07 as along with 1 person guhjy
	Cockayne syndrome group B protein (CSB) plays a general role in chromatin maintenance and remodeling [My Copy] Proceedings of the National Academy of Sciences, Vol. 103, No. 25. (20 June 2006), pp. 9613-9618. by John C. Newman, Arnold D. Bailey, Alan M. Weiner posted to microarray csb cockayne by greg on 2009-10-06 23:56:26 as
	SIRT6 Links Histone H3 Lysine 9 Deacetylation to NF-κB-Dependent Gene Expression and Organismal Life Span [My Copy] Cell, Vol. 136, No. 1. (09 January 2009), pp. 62-74. by Tiara L. A. Kawahara, Eriko Michishita, Adam S. Adler, et al.Mara Damian, Elisabeth Berber, Meihong Lin, Ron A. Mccord, Kristine C. L. Ongaigui, Lisa D. Boxer, Howard Y. Chang posted to aging expression gene microarray nf-kappab nfkb sirt sirt6 by greg on 2009-08-05 16:54:09 as along with 1 person guhjy
	Use of microarray biomarkers to identify longevity therapeutics. [My Copy] Aging cell, Vol. 5, No. 1. (February 2006), pp. 39-50. by Stephen R. Spindler posted to aging biomarkers microarray by greg on 2009-07-31 16:37:48 as
	RaPiDS: An Algorithm for Rapid Expression Profile Database Search [My Copy] Genome Informatics, Vol. 17, No. 2. (2006), pp. 67-76. by Paul B. Horton, Larisa Kiseleva, Wataru Fujibuchi posted to expression microarray profile search by greg on 2009-07-28 17:10:28 as
	Probabilistic retrieval and visualization of biologically relevant microarray experiments [My Copy] Bioinformatics, Vol. 25, No. 12. (15 June 2009), pp. i145-153. by Jose Caldas, Nils Gehlenborg, Ali Faisal, Alvis Brazma, Samuel Kaski posted to expression microarray profile search by greg on 2009-07-27 11:03:14 as along with 6 people jfr ngehlenborg ptrobajo bertelsen guhjy shikin
	CellMontage: similar expression profile search server. [My Copy] Bioinformatics (Oxford, England), Vol. 23, No. 22. (15 November 2007), pp. 3103-3104. by W. Fujibuchi, L. Kiseleva, T. Taniguchi, H. Harada, P. Horton posted to microarray profile search by greg on 2009-07-27 11:01:10 as along with 2 people guhjy jfr
	Effective similarity measures for expression profiles [My Copy] Bioinformatics, Vol. 22, No. 13. (1 July 2006), pp. 1616-1622. by Golan Yona, William Dirks, Shafquat Rahman, David M. Lin posted to metrics microarray similarity by greg on 2009-07-23 12:42:36 as
	Evaluation of similarity measures for gene expression data and their correspondent combined measures [My Copy] Interdisciplinary Sciences: Computational Life Sciences, Vol. 1, No. 1. (1 March 2009), pp. 72-80. by Gang-Guo Li, Zheng-Zhi Wang posted to metric microarray similarity by greg on 2009-07-23 12:40:18 as
	A modified correlation coefficient based similarity measure for clustering time-course gene expression data [My Copy] Pattern Recogn. Lett., Vol. 29, No. 3. (2008), pp. 232-242. by Young S. Son, Jangsun Baek posted to clustering metric microarray similarity by greg on 2009-07-23 12:39:41 as
	Measuring similarities between gene expression profiles through new data transformations [My Copy] BMC Bioinformatics, Vol. 8, No. 1. (27 January 2007), 29. by Kyungpil Kim, Shibo Zhang, Keni Jiang, et al.Li Cai, In B. Lee, Lewis Feldman, Haiyan Huang posted to metric microarray similarity by greg on 2009-07-23 12:38:00 as along with 2 people shigepong minostro
	Key issues in conducting a meta-analysis of gene expression microarray datasets. [My Copy] PLoS medicine, Vol. 5, No. 9. (30 September 2008), e184. by Adaikalavan Ramasamy, Adrian Mondry, Chris C. Holmes, Douglas G. Altman posted to guide meta-analysis microarray review by greg on 2009-07-22 23:01:28 as along with 11 people and 1 group zufar frohike lwaldron daforerog Zephyrus shikin druvus guhjy aviad_work jfr ptrobajo Roswell Cancer Crosstalk
	A cross-study transcriptional analysis of Parkinson's disease. [My Copy] PloS one, Vol. 4, No. 3. (23 March 2009), e4955. by Greg T. Sutherland, Nicholas A. Matigian, Alistair M. Chalk, et al.Matthew J. Anderson, Peter A. Silburn, Alan Mackay-Sim, Christine A. Wells, George D. Mellick posted to aging brain meta-analysis microarray by greg on 2009-07-22 22:36:37 as along with 3 people fazels2 psique daforerog
	Evolutionary conservation of regulated longevity assurance mechanisms [My Copy] Genome Biology, Vol. 8, No. 7. (05 July 2007), R132. by Joshua Mcelwee, Eugene Schuster, Eric Blanc, et al.Matthew Piper, James Thomas, Dhaval Patel, Colin Selman, Dominic Withers, Janet Thornton, Linda Partridge, David Gems posted to aging comparative meta-analysis microarray species by greg on 2009-07-22 15:51:51 as along with 1 person kristen
	Comparing genomic expression patterns across species identifies shared transcriptional profile in aging [My Copy] Nat Genet, Vol. 36, No. 2. (February 2004), pp. 197-204. by Steven A. Mccarroll, Coleen T. Murphy, Sige Zou, et al.Scott D. Pletcher, Chen-Shan Chin, Yuh N. Jan, Cynthia Kenyon, Cornelia I. Bargmann, Hao Li posted to aging comparative genomics microarray species by greg on 2009-07-22 15:45:32 as along with 9 people and 1 group thegoose2 floatingpoint tharris pcahan1 tardigrade johncumbers koller eukfn jeremymiller C. elegans / WormBase
	Trustworthiness and metrics in visualizing similarity of gene expression [My Copy] BMC Bioinformatics, Vol. 4, No. 1. (13 October 2003), 48. by Samuel Kaski, Janne Nikkila, Merja Oja, Jarkko Venna, Petri Toronen, Eero Castren posted to clustering microarray visualization by greg on 2009-07-20 16:21:06 as along with 1 person pimmy
	Gene expression profiling of long-lived dwarf mice: longevity-associated genes and relationships with diet, gender and aging [My Copy] BMC Genomics, Vol. 8, No. 1. (2007), 353. by William Swindell posted to cr microarray by greg on 2009-07-20 16:15:22 as
	Altered cholesterologenic and lipogenic transcriptional profile in livers of aging Snell dwarf (<i>Pit1</i><sup><i>dw/dwJ</i></sup>) mice [My Copy] Aging Cell, Vol. 3, No. 5. (2004), pp. 283-296. by William H. Boylston, Arpad Gerstner, James H. Deford, et al.Mark Madsen, Kevin Flurkey, David E. Harrison, John Papaconstantinou posted to dwarf mice microarray snell by greg on 2009-07-13 11:37:24 as
	Additive regulation of hepatic gene expression by dwarfism and caloric restriction [My Copy] Physiol. Genomics, Vol. 17, No. 3. (19 May 2004), pp. 307-315. by Tomoshi Tsuchiya, Joseph M. Dhahbi, Xinping Cui, Patricia L. Mote, Andrzej Bartke, Stephen R. Spindler posted to caloric dwarfism microarray restriction by greg on 2009-07-13 11:23:26 as
	Repeatability of published microarray gene expression analyses [My Copy] Nature Genetics, Vol. 41, No. 2. (28 January 2008), pp. 149-155. by John P. A. Ioannidis, David B. Allison, Catherine A. Ball, et al.Issa Coulibaly, Xiangqin Cui, Aedin C. Culhane, Mario Falchi, Cesare Furlanello, Laurence Game, Giuseppe Jurman, Jon Mangion, Tapan Mehta, Michael Nitzberg, Grier P. Page, Enrico Petretto, Vera van Noort posted to data microarray repeatability by greg on 2009-07-12 21:37:15 as along with 21 people and 1 group hzoltan heliopais ericrpaquet guhjy frohike TRHvidsten giovenko jfr rdiaz zufar ptrobajo floatingpoint felsani nuin daforerog cabbagesofdoom dswan Zephyrus inesdesantiago djkt paszkows Roswell Cancer Crosstalk
	Filtering for increased power for microarray data analysis. [My Copy] BMC bioinformatics, Vol. 10 (08 January 2009), 11. by A. J. Hackstadt, A. M. Hess posted to analysis data filtering microarray power by greg on 2009-06-24 16:03:11 as along with 6 people and 1 group Zephyrus jfr rdiaz guhjy nuin dswan Bioinformatics
	Significance analysis of time course microarray experiments [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 102, No. 36. (6 September 2005), pp. 12837-12842. by John D. Storey, Wenzhong Xiao, Jeffrey T. Leek, Ronald G. Tompkins, Ronald W. Davis posted to analysis data experments microarray time-course by greg on 2009-06-23 22:30:38 as along with 6 people arne roys egreenfest ugengma jo_davies Montrachet
	Enrichment constrained time-dependent clustering analysis for finding meaningful temporal transcription modules [My Copy] Bioinformatics, Vol. 25, No. 12. (15 June 2009), pp. 1521-1527. by Jia Meng, Shou-Jiang Gao, Yufei Huang posted to analysis data microarray time-course by greg on 2009-06-23 22:30:09 as along with 2 people yaredo shikin
	Clustered alignments of gene-expression time series data. [My Copy] Bioinformatics (Oxford, England), Vol. 25, No. 12. (15 June 2009) by A. A. Smith, A. Vollrath, C. A. Bradfield, M. Craven posted to clustering microarray time-course by greg on 2009-06-23 22:28:59 as along with 1 person colmryan
	MAID : an effect size based model for microarray data integration across laboratories and platforms. [My Copy] BMC bioinformatics, Vol. 9 (10 July 2008), 305. by Ivan Borozan, Limin Chen, Bryan Paeper, et al.Jenny E. Heathcote, Aled M. Edwards, Michael Katze, Zhaolei Zhang, Ian D. McGilvray posted to effect microarray size by greg on 2009-06-22 16:04:08 as along with 6 people daforerog ptrobajo talponer jfr guhjy GeeSharpMinor
	Hippocampal and Cognitive Aging across the Lifespan: A Bioenergetic Shift Precedes and Increased Cholesterol Trafficking Parallels Memory Impairment [My Copy] J. Neurosci., Vol. 29, No. 6. (11 February 2009), pp. 1805-1816. by Inga Kadish, Olivier Thibault, Eric M. Blalock, et al.Kuey-C Chen, John C. Gant, Nada M. Porter, Philip W. Landfield posted to aging cognitive expression gene hippocampal memory mice microarray by greg on 2009-06-22 15:50:06 as along with 2 people jeremymiller psique
	Delayed and accelerated aging share common longevity assurance mechanisms. [My Copy] PLoS genetics, Vol. 4, No. 8. (2008) by Björn Schumacher, Ingrid van der Pluijm, Michael J. Moorhouse, et al.Theodore Kosteas, Andria Rasile R. Robinson, Yousin Suh, Timo M. Breit, Harry van Steeg, Laura J. Niedernhofer, Wilfred van Ijcken, Andrzej Bartke, Stephen R. Spindler, Jan H. Hoeijmakers, Gijsbertus T. van der Horst, George A. Garinis posted to aging calorie comparison cr dwarf expression gene mice microarray mutant restriction by greg on 2009-06-22 15:48:38 as along with 1 person daforerog
	Gene expression profiling of aging reveals activation of a p53-mediated transcriptional program [My Copy] BMC Genomics, Vol. 8 (23 March 2007), 80. by Michael G. Edwards, Rozalyn M. Anderson, Ming Yuan, Christina M. Kendziorski, Richard Weindruch, Tomas A. Prolla posted to aging expression gene microarray p53 by greg on 2009-06-22 15:46:58 as
	Tissue specific and non-specific changes in gene expression by aging and by early stage CR. [My Copy] Mechanisms of ageing and development, Vol. 127, No. 12. (December 2006), pp. 905-916. by C. Fu, M. Hickey, M. Morrison, R. McCarter, E. S. Han posted to calorie changes cr expression gene microarray mouse restriction tissue by greg on 2009-06-22 15:45:02 as along with 1 person mkotlyar
	Transcriptional Profiling of Aging in Human Muscle Reveals a Common Aging Signature [My Copy] PLoS Genetics, Vol. 2, No. 7. (1 July 2006), e115. by Jacob M. Zahn, Rebecca Sonu, Hannes Vogel, et al.Emily Crane, Krystyna Mazan-Mamczarz, Ralph Rabkin, Ronald W. Davis, Kevin G. Becker, Art B. Owen, Stuart K. Kim posted to aging expression gene human microarray muscle by greg on 2009-06-22 15:43:05 as along with 2 people tardigrade kristen
	Age-related trends in gene expression in the chemosensory-nasal mucosae of senescence-accelerated mice. [My Copy] Ageing research reviews, Vol. 2, No. 2. (April 2003), pp. 211-243. by T. V. Getchell, X. Peng, A. J. Stromberg, et al.K. C. Chen, C. Paul Green, N. K. Subhedar, D. S. Shah, M. P. Mattson, M. L. Getchell posted to aging expression gene mice microarray sam by greg on 2009-06-22 15:42:32 as
	The expression signature of in vitro senescence resembles mouse but not human aging. [My Copy] Genome biology, Vol. 6, No. 13. (2005) by K. Wennmalm, C. Wahlestedt, O. Larsson posted to comparison expression gene human microarray mouse senescence by greg on 2009-06-22 15:38:29 as
	Effects of Aging and Calorie Restriction on the Global Gene Expression Profiles of Testis and Ovary [My Copy] BMC Biology, Vol. 6 (03 June 2008), 24. by Alexei A. Sharov, Geppino Falco, Yulan Piao, et al.Suresh Poosala, Kevin G. Becker, Alan B. Zonderman, Dan L. Longo, David Schlessinger, Minoru S. H. Ko posted to aging calorie mice microarray ovary restriction testis by greg on 2009-06-22 15:37:46 as along with 2 people mkotlyar tonia_schwartz
	Evolution of the aging brain transcriptome and synaptic regulation. [My Copy] PloS one, Vol. 3, No. 10. (2008) by P. M. Loerch, T. Lu, K. A. Dakin, et al.J. M. Vann, A. Isaacs, C. Geula, J. Wang, Y. Pan, D. H. Gabuzda, C. Li, T. A. Prolla, B. A. Yankner posted to microarray genomics gene expression comparative brain aging by greg on 2009-06-22 15:28:09 as
	Hepatic gene expression changes in an experimental model of accelerated senescence: the SAM-P8 mouse. [My Copy] The journals of gerontology. Series A, Biological sciences and medical sciences, Vol. 63, No. 10. (October 2008), pp. 1043-1052. by L. Vilà, N. Roglans, M. Alegret, et al.A. Camins, M. Pallàs, R. M. Sánchez, M. Vázquez-Carrera, J. C. Laguna posted to accelerated aging expression gene microarray model mouse senescence by greg on 2009-06-22 15:15:29 as
	UNC - Adjustment of Systematic Microarray Data Biases [My Copy] posted to batch correction microarray systematic by greg on 2009-06-22 15:06:42 as
	Capturing Heterogeneity in Gene Expression Studies by Surrogate Variable Analysis [My Copy] PLoS Genet, Vol. 3, No. 9. (28 September 2007), e161. by Jeffrey T. Leek, John D. Storey posted to microarray by greg on 2009-06-18 16:03:53 as along with 5 people ptrobajo engelhardt jfr lp2 guhjy
	AGEMAP: A Gene Expression Database for Aging in Mice [My Copy] PLoS Genetics, Vol. 3, No. 11. (1 November 2007), e201. by Jacob M. Zahn, Suresh Poosala, Art B. Owen, et al.Donald K. Ingram, Ana Lustig, Arnell Carter, Ashani T. Weeraratna, Dennis D. Taub, Myriam Gorospe, Krystyna Mazan-Mamczarz, Edward G. Lakatta, Kenneth R. Boheler, Xiangru Xu, Mark P. Mattson, Geppino Falco, Minoru S. Ko, David Schlessinger, Jeffrey Firman, Sarah K. Kummerfeld, William H. Wood, Alan B. Zonderman, Stuart K. Kim, Kevin G. Becker posted to database expression gene mice microarray by greg on 2009-06-17 16:19:33 as along with 2 people and 1 group mkotlyar psique parkinson's disease references
	Time-course of mitochondrial gene expressions in mice brains: implications for mitochondrial dysfunction, oxidative damage, and cytochrome c in aging [My Copy] Journal of Neurochemistry, Vol. 92, No. 3. (February 2005), 494. by Maria Manczak, Youngsin Jung, Byung S. Park, Dara Partovi, P. Hemachandra Reddy posted to aging expression gene microarray mitochondria time-course by greg on 2009-06-17 16:19:02 as
	Age-related transcriptional changes in gene expression in different organs of mice support the metabolic stability theory of aging. [My Copy] Biogerontology, Vol. 10, No. 5. (October 2009), pp. 549-564. by Thore C. Brink, Lloyd Demetrius, Hans Lehrach, James Adjaye posted to aging expression gene microarray transcription by greg on 2009-06-16 22:11:32 as along with 1 person guhjy
	Matrix2png: a utility for visualizing matrix data. [My Copy] Bioinformatics (Oxford, England), Vol. 19, No. 2. (22 January 2003), pp. 295-296. by Paul Pavlidis, William Stafford S. Noble posted to heatmap microarray visualization by greg on 2009-06-16 16:06:36 as along with 1 person and 1 group cisevol BergmanLab
	MatInspector and beyond: promoter analysis based on transcription factor binding sites [My Copy] Bioinformatics, Vol. 21, No. 13. (1 July 2005), pp. 2933-2942. by K. Cartharius, K. Frech, K. Grote, et al.B. Klocke, M. Haltmeier, A. Klingenhoff, M. Frisch, M. Bayerlein, T. Werner posted to analysis factor microarray promoter transcription by greg on 2009-06-12 15:36:44 as along with 4 people Copper_Calcio bjbecerra emmahe heliopais
	Comparative promoter analysis allows de novo identification of specialized cell junction-associated proteins [My Copy] Vol. 103, No. 15. (11 April 2006), pp. 5682-5687. by Clemens D. Cohen, Andreas Klingenhoff, Anissa Boucherot, et al.Almut Nitsche, Anna Henger, Bodo Brunner, Holger Schmid, Monika Merkle, Moin A. Saleem, Klaus-Peter Koller, Thomas Werner, Hermann-Josef Gröne, Peter J. Nelson, Matthias Kretzler posted to analysis microarray promoter by greg on 2009-06-12 15:36:26 as
	Analysis of promoter regions of co-expressed genes identified by microarray analysis [My Copy] BMC Bioinformatics, Vol. 7 (17 August 2006), 384. by Srinivas Veerla, Mattias Hoglund posted to co-expression microarray promoter by greg on 2009-06-12 15:29:30 as along with 6 people and 1 group jfr gpalidwor giovanni SeungjoonOh heliopais nuin GeschwindLab

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aging	58
microarray	44
gene	24
expression	21
alternative_splicing	18
review	15
epigenetics	11
pathways	10
analysis	9
gloria	9
nfkb	9
genomics	8
microarrays	8
network	8
cancer	7
comparative	7
model	7
networks	7
pathway	7
regulation	7
str	7
transcription	7
biology	6
mice	6
restriction	6
alternative_splicing_cancer	5
bioinformatics	5
biomarkers	5
brain	5
calorie	5
data	5
dna	5
human	5
response	5
systems	5
cr	4
ests	4
eunice	4
mouse	4
nf-kappab	4
oxidative	4
repeats	4
senescence	4
similarity	4
time-course	4
algorithm	3
clustering	3
damage	3
meta-analysis	3
methylation	3
metric	3
nrf2	3
phd	3
prediction	3
profile	3
progeria	3
promoter	3
repair	3
search	3
sequence_repeats	3
signaling	3
spliceml	3
splicing	3
stress	3
tim	3
algorithms	2
alternative_splicing_databases	2
antioxidant	2
cockayne	2
comparison	2
csb	2
databases	2
dwarf	2
enrichment	2
est	2
evolution	2
factor	2
foxo3a	2
genetics	2
genome	2
gilford	2
graph	2
gsea	2
hutchinson	2
identification	2
longevity	2
mechanisms	2
microsatellites	2
nfe2l2	2
p16ink4a	2
pathway_visualization	2
rna	2
sequencing	2
sirt	2
size	2
species	2
syndrome	2
system	2
tandem	2
targets	2
variation	2
visualization	2
xml	2
accelerated	1
accumulation	1
activation	1
alternative_splicing_microarrays	1
alternative_splicing_review	1
alzheimers	1
ampk	1
apes	1
are	1
associations	1
atm	1
batch	1
bats	1
biological_data_models	1
bmi1	1
caloric	1
cane	1
carbon_metabolism	1
causal_role	1
cell	1
cell-line	1
cellular	1
changes	1
chemopreventive	1
chimpanzee	1
clincial	1
co-expression	1
cognitive	1
common	1
confusion	1
consensus	1
control	1
correction	1
cytoscape	1
database	1
data_integration	1
datamodels	1
de_grey	1
deletions	1
denovo	1
differentially_expressed_genes	1
disease	1
dna_damage_response	1
drosophila	1
drugs	1
dwarfism	1
dynamic_programming_algorithm	1
effect	1
elegans	1
element	1
energy_metabolism	1
energy_regulator	1
enhancers	1
environment	1
experments	1
expression_levels	1
expressoin	1
factors	1
filtering	1
forkhead	1
function	1
functional	1
gadd45	1
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kinase	1
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motif	1
muscle	1
mutant	1
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ngs	1
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old	1
ontology	1
ora	1
organism	1
organization	1
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ovary	1
oxidants	1
p2p	1
p53	1
pathogen	1
pathway_databases_review	1
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peroxisome	1
polymerase	1
power	1
ppar	1
premature	1
protein_expression	1
rapamycin	1
rare	1
rate	1
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redox	1
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regulatory	1
regulatory_network	1
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relevant_features	1
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reserach	1
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rsnps	1
s6	1
salmon	1
sam	1
sample	1
sbgn	1
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screening	1
set	1
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sirt1	1
sirt6	1
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snell	1
snp	1
splice_graphs	1
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stability	1
stem	1
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telomerase	1
tert	1
testis	1
text_mining	1
theory	1
theraputics	1
time	1
tissue	1
toad	1
trinucleotide	1
tutorial	1
varying	1
werner	1
werners	1
werners_syndrome	1
yc	1

greg's microarray [44 articles] Export

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