Generating linkage mapping files from Affymetrix SNP chip data. Export

by: M. Bahlo, C. J. Bromhead

Bioinformatics (Oxford, England), Vol. 25, No. 15. (1 August 2009), pp. 1961-1962.

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Abstract

SUMMARY: LINKDATAGEN is a perl tool that generates linkage mapping input files for five different linkage mapping tools using data from all 11 HAPMAP Phase III populations. It provides rudimentary error checks and is easily amended for personal linkage mapping preferences. Availability and Implementation: LINKDATAGEN is available from http://bioinf.wehi.edu.au/software/linkdatagen/ with accompanying annotation files, reference manual and test dataset.

@article{citeulike:5206828, abstract = {SUMMARY: LINKDATAGEN is a perl tool that generates linkage mapping input files for five different linkage mapping tools using data from all 11 HAPMAP Phase III populations. It provides rudimentary error checks and is easily amended for personal linkage mapping preferences. Availability and Implementation: LINKDATAGEN is available from http://bioinf.wehi.edu.au/software/linkdatagen/ with accompanying annotation files, reference manual and test dataset.}, author = {Bahlo, M. and Bromhead, C. J.}, citeulike-article-id = {5206828}, citeulike-linkout-0 = {http://dx.doi.org/10.1093/bioinformatics/btp313}, citeulike-linkout-1 = {http://view.ncbi.nlm.nih.gov/pubmed/19435744}, citeulike-linkout-2 = {http://www.hubmed.org/display.cgi?uids=19435744}, day = {1}, doi = {10.1093/bioinformatics/btp313}, issn = {1460-2059}, journal = {Bioinformatics (Oxford, England)}, keywords = {affy, linkage, ma, snp}, month = {August}, number = {15}, pages = {1961--1962}, posted-at = {2009-07-21 05:19:13}, priority = {2}, title = {Generating linkage mapping files from Affymetrix SNP chip data.}, url = {http://dx.doi.org/10.1093/bioinformatics/btp313}, volume = {25}, year = {2009} }

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TY - JOUR ID - citeulike:5206828 L3 - citeulike-article-id:5206828 N2 - SUMMARY: LINKDATAGEN is a perl tool that generates linkage mapping input files for five different linkage mapping tools using data from all 11 HAPMAP Phase III populations. It provides rudimentary error checks and is easily amended for personal linkage mapping preferences. Availability and Implementation: LINKDATAGEN is available from http://bioinf.wehi.edu.au/software/linkdatagen/ with accompanying annotation files, reference manual and test dataset. IS - 15 JF - Bioinformatics (Oxford, England) SN - 1460-2059 EP - 1962 TI - Generating linkage mapping files from Affymetrix SNP chip data. VL - 25 SP - 1961 KW - affy KW - linkage KW - ma KW - snp AU - Bahlo, M AU - Bromhead, CJ PY - 2009/08/01/ UR - http://dx.doi.org/10.1093/bioinformatics/btp313 ER -

Generating linkage mapping files from Affymetrix SNP chip data. Export

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